CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 100 & Codon = Cgc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a100G100RnonsynGgcCgc2001930.96525690-25692

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a100G100RGgcCgc193200All0.000037
ORF3a100G100RGgcCgc116116AY.610.012154
ORF3a100G100RGgcCgc1919B.1.1.70.000017
ORF3a100G100RGgcCgc66AY.40.000009
ORF3a100G100RGgcCgc66AY.430.000027
ORF3a100G100RGgcCgc66AY.540.000572
ORF3a100G100RGgcCgc66B.1.6250.014118
ORF3a100G100RGgcCgc25B.1.910.004149
ORF3a100G100RGgcCgc140.055556
ORF3a100G100RGgcCgc44B.1.177.870.002911
ORF3a100G100RGgcCgc44B.1.3130.026316
ORF3a100G100RGgcCgc33B.1.20.000026
ORF3a100G100RGgcCgc22AY.250.000012
ORF3a100G100RGgcCgc22B.10.000018
ORF3a100G100RGgcCgc22B.1.2340.000264
ORF3a100G100RGgcCgc11AY.160.00038
ORF3a100G100RGgcCgc11AY.260.000028
ORF3a100G100RGgcCgc11AY.390.000025
ORF3a100G100RGgcCgc11AY.440.000006
ORF3a100G100RGgcCgc11AY.75.10.00018
ORF3a100G100RGgcCgc11AY.98.10.000048
ORF3a100G100RGgcCgc11B.1.177.40.000211
ORF3a100G100RGgcCgc11B.1.177.730.000566
ORF3a100G100RGgcCgc11B.1.2210.000071
ORF3a100G100RGgcCgc11B.1.3110.000275
ORF3a100G100RGgcCgc11B.1.617.10.000129
ORF3a100G100RGgcCgc11B.1.617.20.000004
ORF3a100G100RGgcCgc11B.1.6210.000089
ORF3a100G100RGgcCgc11P.1.140.000048