CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 100 | G100C | nonsyn | Ggc | Tgc | 19624 | 19520 | 0.9947 | 25690-25692 | |
ORF3a | 100 | G100C | nonsyn | GgC | TgT | 19624 | 104 | 0.00529963 | 25690-25692 | |
ORF3a | 100 | G100V | nonsyn | gGc | gTc | 2458 | 2456 | 0.999186 | 25690-25692 | |
ORF3a | 100 | G100V | nonsyn | gGC | gTA | 2458 | 1 | 0.000406835 | 25690-25692 | |
ORF3a | 100 | G100V | nonsyn | gGC | gTT | 2458 | 1 | 0.000406835 | 25690-25692 | |
ORF3a | 100 | G100D | nonsyn | gGc | gAc | 1395 | 1394 | 0.999283 | 25690-25692 | |
ORF3a | 100 | G100D | nonsyn | gGC | gAT | 1395 | 1 | 0.000716846 | 25690-25692 | |
ORF3a | 100 | G100G | syn | ggC | ggT | 1117 | 1082 | 0.968666 | 25690-25692 | |
ORF3a | 100 | G100G | syn | ggC | ggA | 1117 | 20 | 0.0179051 | 25690-25692 | |
ORF3a | 100 | G100G | syn | ggC | ggG | 1117 | 15 | 0.0134288 | 25690-25692 | |
ORF3a | 100 | G100S | nonsyn | Ggc | Agc | 1068 | 1065 | 0.997191 | 25690-25692 | |
ORF3a | 100 | G100S | nonsyn | GGc | TCc | 1068 | 2 | 0.00187266 | 25690-25692 | |
ORF3a | 100 | G100S | nonsyn | GGC | TCA | 1068 | 1 | 0.00093633 | 25690-25692 | |
ORF3a | 100 | G100R | nonsyn | Ggc | Cgc | 200 | 193 | 0.965 | 25690-25692 | |
ORF3a | 100 | G100R | nonsyn | GgC | AgA | 200 | 2 | 0.01 | 25690-25692 | |
ORF3a | 100 | G100R | nonsyn | GgC | CgA | 200 | 2 | 0.01 | 25690-25692 | |
ORF3a | 100 | G100R | nonsyn | GgC | AgG | 200 | 2 | 0.01 | 25690-25692 | |
ORF3a | 100 | G100R | nonsyn | GgC | CgT | 200 | 1 | 0.005 | 25690-25692 | |
ORF3a | 100 | G100del | del | GGC | --- | 146 | 146 | 1 | 25690-25692 | |
ORF3a | 100 | G100A | nonsyn | gGc | gCc | 26 | 24 | 0.923077 | 25690-25692 | |
ORF3a | 100 | G100A | nonsyn | gGC | gCT | 26 | 1 | 0.0384615 | 25690-25692 | |
ORF3a | 100 | G100A | nonsyn | gGC | gCA | 26 | 1 | 0.0384615 | 25690-25692 | |
ORF3a | 100 | G100F | nonsyn | GGc | TTc | 18 | 17 | 0.944444 | 25690-25692 | |
ORF3a | 100 | G100F | nonsyn | GGC | TTT | 18 | 1 | 0.0555556 | 25690-25692 | |
ORF3a | 100 | G100N | nonsyn | GGc | AAc | 5 | 5 | 1 | 25690-25692 | |
ORF3a | 100 | G100K | nonsyn | GGC | AAA | 5 | 3 | 0.6 | 25690-25692 | |
ORF3a | 100 | G100K | nonsyn | GGC | AAG | 5 | 2 | 0.4 | 25690-25692 | |
ORF3a | 100 | G100X | nonsyn | GgC | TgA | 4 | 3 | 0.75 | 25690-25692 | |
ORF3a | 100 | G100X | nonsyn | GGC | TAA | 4 | 1 | 0.25 | 25690-25692 | |
ORF3a | 100 | G100del1 | del | Ggc | -gc | 3 | 2 | 0.666667 | 25690-25692 | |
ORF3a | 100 | G100E | nonsyn | gGC | gAG | 3 | 2 | 0.666667 | 25690-25692 | |
ORF3a | 100 | G100E | nonsyn | gGC | gAA | 3 | 1 | 0.333333 | 25690-25692 | |
ORF3a | 100 | G100del1 | del | ggC | gg- | 3 | 1 | 0.333333 | 25690-25692 | |
ORF3a | 100 | G100I | nonsyn | GGc | ATc | 2 | 2 | 1 | 25690-25692 | |
ORF3a | 100 | G100L | nonsyn | GGC | CTT | 2 | 1 | 0.5 | 25690-25692 | |
ORF3a | 100 | G100L | nonsyn | GGc | CTc | 2 | 1 | 0.5 | 25690-25692 | |
ORF3a | 100 | G100del2 | del | gGC | g-- | 1 | 1 | 1 | 25690-25692 | |
ORF3a | 100 | G100W | nonsyn | GgC | TgG | 1 | 1 | 1 | 25690-25692 | |
ORF3a | 100 | G100Y | nonsyn | GGc | TAc | 1 | 1 | 1 | 25690-25692 | |
ORF3a | 100 | G100H | nonsyn | GGc | CAc | 1 | 1 | 1 | 25690-25692 | |
ORF3a | 100 | G100Q | nonsyn | GGC | CAA | 1 | 1 | 1 | 25690-25692 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 100 | G100C | Ggc | Tgc | 19520 | 19624 | All | 0.003733 |
ORF3a | 100 | G100C | GgC | TgT | 104 | 19624 | All | 0.00002 |
ORF3a | 100 | G100C | Ggc | Tgc | 9171 | 9271 | B.1.1.7 | 0.00821 |
ORF3a | 100 | G100C | GgC | TgT | 100 | 9271 | B.1.1.7 | 0.00009 |
ORF3a | 100 | G100V | gGc | gTc | 2456 | 2458 | All | 0.00047 |
ORF3a | 100 | G100V | gGC | gTA | 1 | 2458 | All | 0 |
ORF3a | 100 | G100V | gGC | gTT | 1 | 2458 | All | 0 |
ORF3a | 100 | G100C | Ggc | Tgc | 2353 | 2353 | AY.4 | 0.003662 |
ORF3a | 100 | G100V | gGc | gTc | 1403 | 1403 | AY.64 | 0.835119 |
ORF3a | 100 | G100D | gGc | gAc | 1394 | 1395 | All | 0.000267 |
ORF3a | 100 | G100D | gGC | gAT | 1 | 1395 | All | 0 |
ORF3a | 100 | G100G | ggC | ggT | 1082 | 1117 | All | 0.000207 |
ORF3a | 100 | G100G | ggC | ggA | 20 | 1117 | All | 0.000004 |
ORF3a | 100 | G100G | ggC | ggG | 15 | 1117 | All | 0.000003 |
ORF3a | 100 | G100S | Ggc | Agc | 1065 | 1068 | All | 0.000204 |
ORF3a | 100 | G100S | GGc | TCc | 2 | 1068 | All | 0 |
ORF3a | 100 | G100S | GGC | TCA | 1 | 1068 | All | 0 |
ORF3a | 100 | G100C | Ggc | Tgc | 1000 | 1000 | AY.103 | 0.006209 |
ORF3a | 100 | G100D | gGc | gAc | 917 | 917 | B.1.1.7 | 0.000821 |
ORF3a | 100 | G100C | Ggc | Tgc | 620 | 622 | B.1.617.2 | 0.002335 |
ORF3a | 100 | G100C | GgC | TgT | 2 | 622 | B.1.617.2 | 0.000008 |
ORF3a | 100 | G100C | Ggc | Tgc | 521 | 521 | AY.3 | 0.005182 |
ORF3a | 100 | G100S | Ggc | Agc | 491 | 491 | AY.25 | 0.002953 |
ORF3a | 100 | G100C | Ggc | Tgc | 484 | 484 | AY.43 | 0.002144 |
ORF3a | 100 | G100C | Ggc | Tgc | 472 | 472 | AY.44 | 0.002873 |
ORF3a | 100 | G100C | Ggc | Tgc | 329 | 329 | B.1.2 | 0.002897 |
ORF3a | 100 | G100V | gGc | gTc | 319 | 319 | B.1.1.7 | 0.000286 |
ORF3a | 100 | G100G | ggC | ggT | 265 | 267 | AY.4 | 0.000412 |
ORF3a | 100 | G100G | ggC | ggA | 2 | 267 | AY.4 | 0.000003 |
ORF3a | 100 | G100C | Ggc | Tgc | 237 | 237 | AY.42 | 0.009535 |
ORF3a | 100 | G100C | Ggc | Tgc | 212 | 212 | B.1.177 | 0.002792 |
ORF3a | 100 | G100R | Ggc | Cgc | 193 | 200 | All | 0.000037 |
ORF3a | 100 | G100R | GgC | AgA | 2 | 200 | All | 0 |
ORF3a | 100 | G100R | GgC | AgG | 2 | 200 | All | 0 |
ORF3a | 100 | G100R | GgC | CgA | 2 | 200 | All | 0 |
ORF3a | 100 | G100R | GgC | CgT | 1 | 200 | All | 0 |
ORF3a | 100 | G100C | Ggc | Tgc | 182 | 182 | AY.102 | 0.004826 |
ORF3a | 100 | G100C | Ggc | Tgc | 181 | 181 | B.1 | 0.001658 |
ORF3a | 100 | G100C | Ggc | Tgc | 170 | 170 | AY.25 | 0.001023 |
ORF3a | 100 | G100del | GGC | --- | 146 | 146 | All | 0.000028 |
ORF3a | 100 | G100C | Ggc | Tgc | 136 | 136 | B.1.1 | 0.002467 |
ORF3a | 100 | G100C | Ggc | Tgc | 134 | 134 | AY.39 | 0.003311 |
ORF3a | 100 | G100C | Ggc | Tgc | 132 | 132 | AY.99.2 | 0.012165 |
ORF3a | 100 | G100D | gGc | gAc | 123 | 123 | B.1.258.11 | 0.048751 |
ORF3a | 100 | G100D | gGc | gAc | 119 | 119 | B.1.617.1 | 0.015347 |
ORF3a | 100 | G100C | Ggc | Tgc | 118 | 118 | AY.9.1 | 0.009879 |
ORF3a | 100 | G100C | Ggc | Tgc | 116 | 116 | AY.120 | 0.004313 |
ORF3a | 100 | G100R | Ggc | Cgc | 116 | 116 | AY.61 | 0.012154 |
ORF3a | 100 | G100G | ggC | ggT | 112 | 114 | B.1.1.7 | 0.0001 |
ORF3a | 100 | G100G | ggC | ggA | 2 | 114 | B.1.1.7 | 0.000002 |
ORF3a | 100 | G100C | Ggc | Tgc | 107 | 107 | AY.26 | 0.003029 |
ORF3a | 100 | G100C | Ggc | Tgc | 100 | 100 | AY.118 | 0.006265 |
ORF3a | 100 | G100C | Ggc | Tgc | 100 | 100 | B.1.177.27 | 0.943396 |
ORF3a | 100 | G100C | Ggc | Tgc | 99 | 99 | Q.1 | 0.012506 |
ORF3a | 100 | G100V | gGc | gTc | 98 | 98 | B.1.1.291 | 0.072754 |
ORF3a | 100 | G100C | Ggc | Tgc | 91 | 91 | B.1.429 | 0.002141 |
ORF3a | 100 | G100V | gGc | gTc | 91 | 91 | B.1.617.2 | 0.000343 |
ORF3a | 100 | G100S | Ggc | Agc | 85 | 85 | B.1.1.7 | 0.000076 |
ORF3a | 100 | G100C | Ggc | Tgc | 84 | 84 | AY.5 | 0.001735 |
ORF3a | 100 | G100V | gGc | gTc | 81 | 81 | AY.4 | 0.000126 |
ORF3a | 100 | G100C | Ggc | Tgc | 81 | 81 | B.1.258.17 | 0.008422 |
ORF3a | 100 | G100C | Ggc | Tgc | 79 | 79 | AY.109 | 0.058432 |
ORF3a | 100 | G100C | Ggc | Tgc | 76 | 76 | B.1.351 | 0.002259 |
ORF3a | 100 | G100S | Ggc | Agc | 75 | 75 | AY.4 | 0.000117 |
ORF3a | 100 | G100C | Ggc | Tgc | 75 | 75 | B.1.1.222 | 0.0153 |
ORF3a | 100 | G100C | Ggc | Tgc | 68 | 68 | P.1 | 0.001071 |
ORF3a | 100 | G100V | gGc | gTc | 65 | 65 | B.1.2 | 0.000572 |
ORF3a | 100 | G100C | Ggc | Tgc | 63 | 63 | AY.33 | 0.004207 |
ORF3a | 100 | G100C | Ggc | Tgc | 61 | 61 | B.1.400 | 0.026169 |
ORF3a | 100 | G100G | ggC | ggT | 57 | 57 | B.1.14 | 1 |
ORF3a | 100 | G100C | Ggc | Tgc | 54 | 54 | B.1.1.519 | 0.002144 |
ORF3a | 100 | G100G | ggC | ggT | 54 | 54 | B.1.177 | 0.000711 |
ORF3a | 100 | G100G | ggC | ggT | 54 | 54 | B.1.637 | 0.003946 |
ORF3a | 100 | G100C | Ggc | Tgc | 52 | 52 | B.1.160 | 0.001622 |
ORF3a | 100 | G100D | gGc | gAc | 51 | 51 | B.1.389 | 0.051102 |
ORF3a | 100 | G100G | ggC | ggT | 50 | 50 | AY.103 | 0.00031 |
ORF3a | 100 | G100C | Ggc | Tgc | 48 | 48 | B.1.177.16 | 0.031894 |
ORF3a | 100 | G100C | Ggc | Tgc | 40 | 40 | AY.4.2.1 | 0.005959 |
ORF3a | 100 | G100C | Ggc | Tgc | 39 | 39 | AY.98.1 | 0.001889 |
ORF3a | 100 | G100C | Ggc | Tgc | 37 | 37 | AY.74 | 0.004279 |
ORF3a | 100 | G100G | ggC | ggT | 36 | 36 | AY.26 | 0.001019 |
ORF3a | 100 | G100del | GGC | --- | 36 | 36 | B.1.1.7 | 0.000032 |
ORF3a | 100 | G100G | ggC | ggT | 33 | 36 | B.1.617.2 | 0.000124 |
ORF3a | 100 | G100G | ggC | ggG | 3 | 36 | B.1.617.2 | 0.000011 |
ORF3a | 100 | G100V | gGc | gTc | 33 | 33 | AY.43 | 0.000146 |
ORF3a | 100 | G100V | gGc | gTc | 32 | 32 | AY.98 | 0.002528 |
ORF3a | 100 | G100C | Ggc | Tgc | 32 | 32 | B.1.1.306 | 0.014029 |
ORF3a | 100 | G100D | gGc | gAc | 31 | 31 | B.1 | 0.000284 |
ORF3a | 100 | G100C | Ggc | Tgc | 30 | 30 | AY.91 | 0.021914 |
ORF3a | 100 | G100C | Ggc | Tgc | 30 | 30 | B.1.1.12 | 0.223881 |
ORF3a | 100 | G100C | Ggc | Tgc | 30 | 30 | C.36 | 0.027322 |
ORF3a | 100 | G100S | Ggc | Agc | 29 | 29 | AY.3 | 0.000288 |
ORF3a | 100 | G100S | Ggc | Agc | 29 | 29 | AY.46.6 | 0.002094 |
ORF3a | 100 | G100G | ggC | ggT | 29 | 29 | AY.99.2 | 0.002673 |
ORF3a | 100 | G100C | Ggc | Tgc | 28 | 28 | AY.34 | 0.002715 |
ORF3a | 100 | G100C | Ggc | Tgc | 28 | 28 | B.1.258 | 0.001863 |
ORF3a | 100 | G100C | Ggc | Tgc | 28 | 28 | C.37 | 0.00325 |
ORF3a | 100 | G100S | Ggc | Agc | 27 | 27 | AY.103 | 0.000168 |
ORF3a | 100 | G100S | Ggc | Agc | 27 | 27 | AY.14 | 0.002376 |
ORF3a | 100 | G100C | Ggc | Tgc | 27 | 27 | AY.46 | 0.00281 |
ORF3a | 100 | G100C | Ggc | Tgc | 27 | 27 | AY.75 | 0.001513 |
ORF3a | 100 | G100C | Ggc | Tgc | 27 | 27 | AY.9.2 | 0.000992 |
ORF3a | 100 | G100C | Ggc | Tgc | 27 | 27 | B.1.399 | 0.052224 |
ORF3a | 100 | G100G | ggC | ggT | 27 | 27 | B.1.527 | 0.1 |
ORF3a | 100 | G100A | gGc | gCc | 24 | 26 | All | 0.000005 |
ORF3a | 100 | G100A | gGC | gCT | 1 | 26 | All | 0 |
ORF3a | 100 | G100A | gGC | gCA | 1 | 26 | All | 0 |
ORF3a | 100 | G100C | Ggc | Tgc | 26 | 26 | AY.106 | 0.008707 |
ORF3a | 100 | G100C | Ggc | Tgc | 25 | 25 | AE.8 | 0.012225 |
ORF3a | 100 | G100V | gGc | gTc | 25 | 25 | AY.25 | 0.00015 |
ORF3a | 100 | G100C | Ggc | Tgc | 25 | 25 | AY.29 | 0.000394 |
ORF3a | 100 | G100C | Ggc | Tgc | 25 | 25 | B.1.36 | 0.003648 |
ORF3a | 100 | G100C | Ggc | Tgc | 23 | 23 | B.1.595 | 0.006002 |
ORF3a | 100 | G100G | ggC | ggT | 22 | 22 | AY.25 | 0.000132 |
ORF3a | 100 | G100S | Ggc | Agc | 22 | 22 | AY.44 | 0.000134 |
ORF3a | 100 | G100G | ggC | ggT | 21 | 22 | P.1 | 0.000331 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 22 | P.1 | 0.000016 |
ORF3a | 100 | G100V | gGc | gTc | 21 | 21 | AY.65 | 0.011194 |
ORF3a | 100 | G100G | ggC | ggT | 21 | 21 | B.1.36.18 | 0.008824 |
ORF3a | 100 | G100C | Ggc | Tgc | 21 | 21 | P.1.17 | 0.003397 |
ORF3a | 100 | G100V | gGc | gTc | 19 | 20 | AY.44 | 0.000116 |
ORF3a | 100 | G100V | gGC | gTA | 1 | 20 | AY.44 | 0.000006 |
ORF3a | 100 | G100C | Ggc | Tgc | 20 | 20 | B.1.1.226 | 0.116279 |
ORF3a | 100 | G100C | Ggc | Tgc | 20 | 20 | Q.3 | 0.002901 |
ORF3a | 100 | G100C | Ggc | Tgc | 19 | 19 | AY.100 | 0.000874 |
ORF3a | 100 | G100G | ggC | ggT | 19 | 19 | AY.116.1 | 0.005917 |
ORF3a | 100 | G100C | Ggc | Tgc | 19 | 19 | AY.119 | 0.000671 |
ORF3a | 100 | G100R | Ggc | Cgc | 19 | 19 | B.1.1.7 | 0.000017 |
ORF3a | 100 | G100C | Ggc | Tgc | 19 | 19 | B.1.232 | 0.01021 |
ORF3a | 100 | G100S | Ggc | Agc | 19 | 19 | B.1.617.2 | 0.000072 |
ORF3a | 100 | G100C | Ggc | Tgc | 19 | 19 | R.1 | 0.00171 |
ORF3a | 100 | G100F | GGc | TTc | 17 | 18 | All | 0.000003 |
ORF3a | 100 | G100F | GGC | TTT | 1 | 18 | All | 0 |
ORF3a | 100 | G100C | Ggc | Tgc | 18 | 18 | AY.117 | 0.001521 |
ORF3a | 100 | G100G | ggC | ggT | 18 | 18 | AY.29 | 0.000284 |
ORF3a | 100 | G100D | gGc | gAc | 18 | 18 | AY.4 | 0.000028 |
ORF3a | 100 | G100C | Ggc | Tgc | 18 | 18 | B.1.1.241 | 0.037267 |
ORF3a | 100 | G100S | Ggc | Agc | 18 | 18 | B.1.2 | 0.000158 |
ORF3a | 100 | G100S | Ggc | Agc | 18 | 18 | R.1 | 0.00162 |
ORF3a | 100 | G100S | Ggc | Agc | 17 | 17 | AY.43 | 0.000075 |
ORF3a | 100 | G100C | Ggc | Tgc | 17 | 17 | AY.5.4 | 0.004704 |
ORF3a | 100 | G100C | Ggc | Tgc | 17 | 17 | AY.7 | 0.003332 |
ORF3a | 100 | G100V | gGc | gTc | 17 | 17 | AY.9.2 | 0.000624 |
ORF3a | 100 | G100C | Ggc | Tgc | 17 | 17 | B.1.1.294 | 0.021519 |
ORF3a | 100 | G100G | ggC | ggT | 16 | 17 | B.1.351 | 0.000476 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 17 | B.1.351 | 0.00003 |
ORF3a | 100 | G100C | Ggc | Tgc | 17 | 17 | B.1.351.2 | 0.005144 |
ORF3a | 100 | G100S | Ggc | Agc | 17 | 17 | B.1.429 | 0.0004 |
ORF3a | 100 | G100C | Ggc | Tgc | 17 | 17 | P.1.17.1 | 0.014873 |
ORF3a | 100 | G100C | Ggc | Tgc | 16 | 16 | AY.4.2 | 0.000347 |
ORF3a | 100 | G100C | Ggc | Tgc | 16 | 16 | B.1.509 | 0.013853 |
ORF3a | 100 | G100C | Ggc | Tgc | 16 | 16 | B.1.526 | 0.000376 |
ORF3a | 100 | G100C | Ggc | Tgc | 16 | 16 | P.1.14 | 0.000765 |
ORF3a | 100 | G100C | Ggc | Tgc | 15 | 15 | AY.20 | 0.000583 |
ORF3a | 100 | G100C | Ggc | Tgc | 15 | 15 | AY.47 | 0.000467 |
ORF3a | 100 | G100C | Ggc | Tgc | 15 | 15 | AY.84 | 0.006562 |
ORF3a | 100 | G100S | Ggc | Agc | 13 | 15 | B.1 | 0.000119 |
ORF3a | 100 | G100S | GGC | TCA | 1 | 15 | B.1 | 0.000009 |
ORF3a | 100 | G100S | GGc | TCc | 1 | 15 | B.1 | 0.000009 |
ORF3a | 100 | G100C | Ggc | Tgc | 15 | 15 | B.1.561 | 0.005955 |
ORF3a | 100 | G100C | Ggc | Tgc | 14 | 14 | AY.23 | 0.000976 |
ORF3a | 100 | G100C | Ggc | Tgc | 14 | 14 | AY.59 | 0.007415 |
ORF3a | 100 | G100S | Ggc | Agc | 13 | 13 | AY.119 | 0.000459 |
ORF3a | 100 | G100C | Ggc | Tgc | 13 | 13 | AY.61 | 0.001362 |
ORF3a | 100 | G100del | GGC | --- | 13 | 13 | B.1 | 0.000119 |
ORF3a | 100 | G100C | Ggc | Tgc | 13 | 13 | B.1.582 | 0.006379 |
ORF3a | 100 | G100C | Ggc | Tgc | 13 | 13 | D.2 | 0.000976 |
ORF3a | 100 | G100C | Ggc | Tgc | 13 | 13 | Q.8 | 0.002144 |
ORF3a | 100 | G100V | gGc | gTc | 12 | 12 | AY.103 | 0.000075 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | AY.114 | 0.002773 |
ORF3a | 100 | G100V | gGc | gTc | 12 | 12 | AY.119 | 0.000424 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | AY.70 | 0.002502 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | AY.73 | 0.007984 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | AY.9 | 0.000811 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | B.1.1.189 | 0.018154 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | B.1.1.312 | 0.022945 |
ORF3a | 100 | G100C | Ggc | Tgc | 12 | 12 | B.1.362 | 0.01849 |
ORF3a | 100 | G100V | gGc | gTc | 12 | 12 | P.1 | 0.000189 |
ORF3a | 100 | G100C | Ggc | Tgc | 11 | 11 | B.1.1.16 | 0.611111 |
ORF3a | 100 | G100C | Ggc | Tgc | 11 | 11 | B.1.1.318 | 0.003319 |
ORF3a | 100 | G100C | Ggc | Tgc | 11 | 11 | B.1.210 | 0.023454 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 11 | B.1.221 | 0.00071 |
ORF3a | 100 | G100C | GgC | TgT | 1 | 11 | B.1.221 | 0.000071 |
ORF3a | 100 | G100S | Ggc | Agc | 11 | 11 | B.1.351 | 0.000327 |
ORF3a | 100 | G100V | gGc | gTc | 10 | 10 | AY.102 | 0.000265 |
ORF3a | 100 | G100D | gGc | gAc | 10 | 10 | AY.25 | 0.00006 |
ORF3a | 100 | G100G | ggC | ggT | 8 | 10 | AY.43 | 0.000035 |
ORF3a | 100 | G100G | ggC | ggA | 2 | 10 | AY.43 | 0.000009 |
ORF3a | 100 | G100G | ggC | ggT | 10 | 10 | AY.44 | 0.000061 |
ORF3a | 100 | G100G | ggC | ggT | 10 | 10 | AY.45 | 0.001217 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 10 | AY.6 | 0.000411 |
ORF3a | 100 | G100V | gGc | gTc | 10 | 10 | AY.99.2 | 0.000922 |
ORF3a | 100 | G100G | ggC | ggT | 8 | 10 | B.1 | 0.000073 |
ORF3a | 100 | G100G | ggC | ggA | 2 | 10 | B.1 | 0.000018 |
ORF3a | 100 | G100S | Ggc | Agc | 10 | 10 | B.1.1 | 0.000181 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 10 | B.1.1.121 | 0.024272 |
ORF3a | 100 | G100del | GGC | --- | 10 | 10 | B.1.177 | 0.000132 |
ORF3a | 100 | G100G | ggC | ggT | 10 | 10 | B.1.2 | 0.000088 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 10 | B.1.234 | 0.001319 |
ORF3a | 100 | G100G | ggC | ggT | 10 | 10 | B.1.36.24 | 0.061728 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 10 | B.1.427 | 0.000505 |
ORF3a | 100 | G100C | Ggc | Tgc | 10 | 10 | C.16 | 0.010604 |
ORF3a | 100 | G100V | gGc | gTc | 9 | 9 | AY.13 | 0.001449 |
ORF3a | 100 | G100del | GGC | --- | 9 | 9 | AY.43 | 0.00004 |
ORF3a | 100 | G100V | gGc | gTc | 9 | 9 | AY.5 | 0.000186 |
ORF3a | 100 | G100C | Ggc | Tgc | 9 | 9 | AY.75.1 | 0.001623 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 9 | B.1.1 | 0.000091 |
ORF3a | 100 | G100G | ggC | ggA | 3 | 9 | B.1.1 | 0.000054 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 9 | B.1.1 | 0.000018 |
ORF3a | 100 | G100G | ggC | ggT | 9 | 9 | B.1.177.86 | 0.001651 |
ORF3a | 100 | G100C | Ggc | Tgc | 9 | 9 | B.1.243 | 0.000626 |
ORF3a | 100 | G100del | GGC | --- | 9 | 9 | B.1.351 | 0.000268 |
ORF3a | 100 | G100C | Ggc | Tgc | 9 | 9 | B.1.36.29 | 0.004656 |
ORF3a | 100 | G100C | Ggc | Tgc | 9 | 9 | B.1.428.2 | 0.3 |
ORF3a | 100 | G100C | Ggc | Tgc | 9 | 9 | B.1.617.1 | 0.001161 |
ORF3a | 100 | G100D | gGc | gAc | 9 | 9 | Q.8 | 0.001484 |
ORF3a | 100 | G100G | ggC | ggG | 4 | 8 | 0.222222 | |
ORF3a | 100 | G100G | ggC | ggA | 2 | 8 | 0.111111 | |
ORF3a | 100 | G100G | ggC | ggT | 2 | 8 | 0.111111 | |
ORF3a | 100 | G100G | ggC | ggT | 8 | 8 | AY.3 | 0.00008 |
ORF3a | 100 | G100C | Ggc | Tgc | 8 | 8 | AY.3.1 | 0.000682 |
ORF3a | 100 | G100C | Ggc | Tgc | 8 | 8 | AY.39.1 | 0.000317 |
ORF3a | 100 | G100G | ggC | ggT | 8 | 8 | AY.42 | 0.000322 |
ORF3a | 100 | G100V | gGc | gTc | 8 | 8 | B.1.1 | 0.000145 |
ORF3a | 100 | G100V | gGc | gTc | 8 | 8 | B.1.1.217 | 0.029091 |
ORF3a | 100 | G100C | Ggc | Tgc | 8 | 8 | B.1.474 | 0.015209 |
ORF3a | 100 | G100C | Ggc | Tgc | 8 | 8 | B.1.564 | 0.003407 |
ORF3a | 100 | G100D | gGc | gAc | 8 | 8 | B.1.617.2 | 0.00003 |
ORF3a | 100 | G100C | Ggc | Tgc | 7 | 7 | AY.113 | 0.000997 |
ORF3a | 100 | G100G | ggC | ggT | 7 | 7 | AY.46.2 | 0.004447 |
ORF3a | 100 | G100C | Ggc | Tgc | 7 | 7 | AY.46.6 | 0.000505 |
ORF3a | 100 | G100D | gGc | gAc | 7 | 7 | B.1.1.157 | 0.006393 |
ORF3a | 100 | G100C | Ggc | Tgc | 7 | 7 | B.1.1.159 | 0.03271 |
ORF3a | 100 | G100C | Ggc | Tgc | 7 | 7 | B.1.1.216 | 0.006233 |
ORF3a | 100 | G100C | Ggc | Tgc | 7 | 7 | B.1.1.232 | 0.012704 |
ORF3a | 100 | G100V | gGc | gTc | 7 | 7 | B.1.177 | 0.000092 |
ORF3a | 100 | G100S | Ggc | Agc | 7 | 7 | B.1.467 | 0.28 |
ORF3a | 100 | G100V | gGc | gTc | 7 | 7 | D.2 | 0.000525 |
ORF3a | 100 | G100del | GGC | --- | 7 | 7 | P.1 | 0.00011 |
ORF3a | 100 | G100G | ggC | ggT | 6 | 6 | AY.100 | 0.000276 |
ORF3a | 100 | G100G | ggC | ggT | 6 | 6 | AY.13 | 0.000966 |
ORF3a | 100 | G100R | Ggc | Cgc | 6 | 6 | AY.4 | 0.000009 |
ORF3a | 100 | G100R | Ggc | Cgc | 6 | 6 | AY.43 | 0.000027 |
ORF3a | 100 | G100D | gGc | gAc | 6 | 6 | AY.44 | 0.000037 |
ORF3a | 100 | G100R | Ggc | Cgc | 6 | 6 | AY.54 | 0.000572 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | AY.56 | 0.009631 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | AY.77 | 0.006764 |
ORF3a | 100 | G100V | gGc | gTc | 6 | 6 | B.1 | 0.000055 |
ORF3a | 100 | G100D | gGc | gAc | 6 | 6 | B.1.1 | 0.000109 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | B.1.1.317 | 0.00247 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | B.1.1.369 | 0.002677 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | B.1.1.50 | 0.004073 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 6 | B.1.160 | 0.000156 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 6 | B.1.160 | 0.000031 |
ORF3a | 100 | G100D | gGc | gAc | 6 | 6 | B.1.2 | 0.000053 |
ORF3a | 100 | G100A | gGc | gCc | 6 | 6 | B.1.2 | 0.000053 |
ORF3a | 100 | G100S | Ggc | Agc | 6 | 6 | B.1.240 | 0.001293 |
ORF3a | 100 | G100V | gGc | gTc | 6 | 6 | B.1.351 | 0.000178 |
ORF3a | 100 | G100G | ggC | ggT | 6 | 6 | B.1.526 | 0.000141 |
ORF3a | 100 | G100G | ggC | ggT | 6 | 6 | B.1.617.1 | 0.000774 |
ORF3a | 100 | G100C | Ggc | Tgc | 6 | 6 | B.1.621 | 0.000531 |
ORF3a | 100 | G100R | Ggc | Cgc | 6 | 6 | B.1.625 | 0.014118 |
ORF3a | 100 | G100N | GGc | AAc | 5 | 5 | All | 0.000001 |
ORF3a | 100 | G100K | GGC | AAA | 3 | 5 | All | 0.000001 |
ORF3a | 100 | G100K | GGC | AAG | 2 | 5 | All | 0 |
ORF3a | 100 | G100G | ggC | ggT | 4 | 5 | AY.102 | 0.000106 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 5 | AY.102 | 0.000027 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 5 | AY.113 | 0.000712 |
ORF3a | 100 | G100A | gGc | gCc | 5 | 5 | AY.116 | 0.001434 |
ORF3a | 100 | G100G | ggC | ggT | 4 | 5 | AY.118 | 0.000251 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 5 | AY.118 | 0.000063 |
ORF3a | 100 | G100V | gGc | gTc | 5 | 5 | AY.120 | 0.000186 |
ORF3a | 100 | G100V | gGc | gTc | 5 | 5 | AY.24 | 0.002155 |
ORF3a | 100 | G100D | gGc | gAc | 5 | 5 | AY.26 | 0.000142 |
ORF3a | 100 | G100V | gGc | gTc | 5 | 5 | AY.3 | 0.00005 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | AY.34.1 | 0.00255 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 5 | AY.39 | 0.000074 |
ORF3a | 100 | G100G | ggC | ggG | 2 | 5 | AY.39 | 0.000049 |
ORF3a | 100 | G100V | gGc | gTc | 5 | 5 | AY.4.2 | 0.000108 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 5 | AY.4.2 | 0.000108 |
ORF3a | 100 | G100V | gGc | gTc | 5 | 5 | AY.4.5 | 0.000537 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | AY.71 | 0.002375 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | AY.95 | 0.003805 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | B.1.1.153 | 0.005476 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | B.1.1.33 | 0.002104 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 5 | B.1.1.397 | 0.011261 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | B.1.1.486 | 0.007886 |
ORF3a | 100 | G100S | Ggc | Agc | 5 | 5 | B.1.1.519 | 0.000199 |
ORF3a | 100 | G100S | Ggc | Agc | 5 | 5 | B.1.160 | 0.000156 |
ORF3a | 100 | G100S | Ggc | Agc | 5 | 5 | B.1.177 | 0.000066 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 5 | B.1.221 | 0.000355 |
ORF3a | 100 | G100S | Ggc | Agc | 5 | 5 | B.1.258 | 0.000333 |
ORF3a | 100 | G100D | gGc | gAc | 5 | 5 | B.1.36.8 | 0.005 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | B.1.403 | 0.01634 |
ORF3a | 100 | G100C | Ggc | Tgc | 5 | 5 | B.1.411 | 0.018519 |
ORF3a | 100 | G100G | ggC | ggT | 5 | 5 | B.1.429 | 0.000118 |
ORF3a | 100 | G100D | gGc | gAc | 5 | 5 | B.1.429 | 0.000118 |
ORF3a | 100 | G100del | GGC | --- | 5 | 5 | B.1.525 | 0.000566 |
ORF3a | 100 | G100R | Ggc | Cgc | 2 | 5 | B.1.91 | 0.004149 |
ORF3a | 100 | G100R | GgC | CgA | 2 | 5 | B.1.91 | 0.004149 |
ORF3a | 100 | G100R | GgC | AgA | 1 | 5 | B.1.91 | 0.002075 |
ORF3a | 100 | G100R | GgC | AgG | 2 | 4 | 0.111111 | |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 4 | 0.055556 | |
ORF3a | 100 | G100R | GgC | CgT | 1 | 4 | 0.055556 | |
ORF3a | 100 | G100X | GgC | TgA | 3 | 4 | All | 0.000001 |
ORF3a | 100 | G100X | GGC | TAA | 1 | 4 | All | 0 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | AY.102 | 0.000106 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.16.1 | 0.00188 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.19 | 0.004561 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.24 | 0.001724 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | AY.26 | 0.000113 |
ORF3a | 100 | G100D | gGc | gAc | 4 | 4 | AY.3 | 0.00004 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | AY.32 | 0.00213 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | AY.39 | 0.000099 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | AY.39 | 0.000099 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | AY.5 | 0.000083 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.54 | 0.000381 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | AY.61 | 0.000419 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.68 | 0.001095 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.7.1 | 0.000451 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.98 | 0.000316 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | AY.99 | 0.004197 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | B.1.1.214 | 0.000222 |
ORF3a | 100 | G100D | gGc | gAc | 4 | 4 | B.1.1.277 | 0.003035 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | B.1.1.39 | 0.002039 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | B.1.177.86 | 0.000734 |
ORF3a | 100 | G100R | Ggc | Cgc | 4 | 4 | B.1.177.87 | 0.002911 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | B.1.241 | 0.003247 |
ORF3a | 100 | G100R | Ggc | Cgc | 4 | 4 | B.1.313 | 0.026316 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | B.1.36 | 0.000584 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | B.1.36.17 | 0.001976 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | B.1.525 | 0.000453 |
ORF3a | 100 | G100S | Ggc | Agc | 4 | 4 | B.1.526 | 0.000094 |
ORF3a | 100 | G100V | gGc | gTc | 4 | 4 | B.1.570 | 0.011765 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | B.1.591 | 0.042553 |
ORF3a | 100 | G100del | GGC | --- | 4 | 4 | P.1.15 | 0.000929 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | P.1.7 | 0.001277 |
ORF3a | 100 | G100C | Ggc | Tgc | 4 | 4 | P.2 | 0.000747 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 3 | 0.111111 | |
ORF3a | 100 | G100C | GgC | TgT | 1 | 3 | 0.055556 | |
ORF3a | 100 | G100E | gGC | gAG | 2 | 3 | All | 0 |
ORF3a | 100 | G100del1 | Ggc | -gc | 2 | 3 | All | 0 |
ORF3a | 100 | G100del1 | ggC | gg- | 1 | 3 | All | 0 |
ORF3a | 100 | G100E | gGC | gAA | 1 | 3 | All | 0 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | AY.100 | 0.000138 |
ORF3a | 100 | G100D | gGc | gAc | 3 | 3 | AY.102 | 0.00008 |
ORF3a | 100 | G100V | gGc | gTc | 3 | 3 | AY.105 | 0.001929 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.108 | 0.003308 |
ORF3a | 100 | G100V | gGc | gTc | 3 | 3 | AY.118 | 0.000188 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.121 | 0.000406 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | AY.121 | 0.000406 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.13 | 0.000483 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | AY.20 | 0.000117 |
ORF3a | 100 | G100del | GGC | --- | 3 | 3 | AY.23 | 0.000209 |
ORF3a | 100 | G100del | GGC | --- | 3 | 3 | AY.25 | 0.000018 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.27 | 0.000194 |
ORF3a | 100 | G100V | gGc | gTc | 3 | 3 | AY.33 | 0.0002 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.36 | 0.000445 |
ORF3a | 100 | G100F | GGc | TTc | 3 | 3 | AY.4 | 0.000005 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | AY.4.4 | 0.001227 |
ORF3a | 100 | G100del | GGC | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 3 | AY.43 | 0.000009 |
ORF3a | 100 | G100D | gGC | gAT | 1 | 3 | AY.43 | 0.000004 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.45 | 0.000365 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.46.4 | 0.000494 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | AY.47 | 0.000093 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.48 | 0.001395 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.49 | 0.009585 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | AY.53 | 0.000863 |
ORF3a | 100 | G100V | gGc | gTc | 3 | 3 | AY.60 | 0.002814 |
ORF3a | 100 | G100V | gGc | gTc | 3 | 3 | AY.67 | 0.001393 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | AY.9.1 | 0.000251 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.1.214 | 0.000166 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | B.1.1.253 | 0.007519 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.1.286 | 0.008696 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | B.1.1.33 | 0.001263 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 3 | B.1.1.519 | 0.000079 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 3 | B.1.1.519 | 0.00004 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.108 | 0.017442 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.128 | 0.001906 |
ORF3a | 100 | G100D | gGc | gAc | 3 | 3 | B.1.160 | 0.000094 |
ORF3a | 100 | G100R | Ggc | Cgc | 3 | 3 | B.1.2 | 0.000026 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | B.1.234 | 0.000396 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.241 | 0.002435 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | B.1.36 | 0.000438 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.369 | 0.000856 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.390 | 0.031915 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.396 | 0.002117 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.416 | 0.003807 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | B.1.427 | 0.000151 |
ORF3a | 100 | G100D | gGc | gAc | 3 | 3 | B.1.427 | 0.000151 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.441 | 0.028846 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.538 | 0.024194 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.558 | 0.013699 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.575 | 0.00091 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.609 | 0.001438 |
ORF3a | 100 | G100del | GGC | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF3a | 100 | G100F | GGc | TTc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.620 | 0.002838 |
ORF3a | 100 | G100del | GGC | --- | 3 | 3 | B.1.621 | 0.000266 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | B.1.621.1 | 0.001517 |
ORF3a | 100 | G100G | ggC | ggT | 3 | 3 | B.55 | 0.00885 |
ORF3a | 100 | G100F | GGc | TTc | 3 | 3 | C.36 | 0.002732 |
ORF3a | 100 | G100S | Ggc | Agc | 3 | 3 | P.1 | 0.000047 |
ORF3a | 100 | G100C | Ggc | Tgc | 3 | 3 | P.1.1 | 0.000953 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | 0.111111 | |
ORF3a | 100 | G100N | GGc | AAc | 2 | 2 | 0.111111 | |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | 0.111111 | |
ORF3a | 100 | G100K | GGC | AAG | 2 | 2 | 0.111111 | |
ORF3a | 100 | G100E | gGC | gAG | 2 | 2 | 0.111111 | |
ORF3a | 100 | G100V | gGC | gTT | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100L | GGC | CTT | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100L | GGc | CTc | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100F | GGC | TTT | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100V | gGc | gTc | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100F | GGc | TTc | 1 | 2 | 0.055556 | |
ORF3a | 100 | G100I | GGc | ATc | 2 | 2 | All | 0 |
ORF3a | 100 | G100L | GGC | CTT | 1 | 2 | All | 0 |
ORF3a | 100 | G100L | GGc | CTc | 1 | 2 | All | 0 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.100 | 0.000092 |
ORF3a | 100 | G100del | GGC | --- | 2 | 2 | AY.100 | 0.000092 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.101 | 0.000981 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | AY.103 | 0.000012 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.116 | 0.000574 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.12 | 0.000632 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.120 | 0.000074 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.120.2 | 0.002571 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.14 | 0.000176 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.16 | 0.000759 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.2 | 0.000712 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.20 | 0.000078 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.23 | 0.000139 |
ORF3a | 100 | G100R | Ggc | Cgc | 2 | 2 | AY.25 | 0.000012 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.29.1 | 0.000441 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.30 | 0.000791 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.32 | 0.001065 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | AY.33 | 0.000134 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.36 | 0.000296 |
ORF3a | 100 | G100del | GGC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.4.1 | 0.001475 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.4.3 | 0.001684 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.4.4 | 0.000818 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.4.4 | 0.000818 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.4.5 | 0.000215 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.40 | 0.001929 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.42 | 0.00008 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.46.2 | 0.001271 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.46.4 | 0.000329 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.47 | 0.000062 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.5.3 | 0.000675 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.52 | 0.001629 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.53 | 0.000575 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.54 | 0.000191 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.58 | 0.001815 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.61 | 0.00021 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.62 | 0.000871 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.63 | 0.000774 |
ORF3a | 100 | G100I | GGc | ATc | 2 | 2 | AY.64 | 0.00119 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.73 | 0.001331 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.75 | 0.000112 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | AY.75 | 0.000112 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | AY.80 | 0.002257 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.81 | 0.003984 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.82 | 0.002714 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.88 | 0.001768 |
ORF3a | 100 | G100A | gGc | gCc | 2 | 2 | AY.9.1 | 0.000167 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | AY.9.2 | 0.000073 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | AY.94 | 0.000885 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | AY.98.1 | 0.000097 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | B | 0.000256 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B | 0.000256 |
ORF3a | 100 | G100R | Ggc | Cgc | 2 | 2 | B.1 | 0.000018 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 2 | B.1 | 0.000009 |
ORF3a | 100 | G100A | gGC | gCA | 1 | 2 | B.1 | 0.000009 |
ORF3a | 100 | G100F | GGc | TTc | 2 | 2 | B.1.1 | 0.000036 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.161 | 0.007067 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.163 | 0.015267 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | B.1.1.222 | 0.000408 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.25 | 0.001137 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.256 | 0.027397 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | B.1.1.279 | 0.002242 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.28 | 0.000622 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.326 | 0.003521 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.1.372 | 0.001377 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 2 | B.1.1.519 | 0.00004 |
ORF3a | 100 | G100A | gGC | gCT | 1 | 2 | B.1.1.519 | 0.00004 |
ORF3a | 100 | G100A | gGc | gCc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF3a | 100 | G100F | GGc | TTc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.127 | 0.004396 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.147 | 0.001512 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | B.1.177.15 | 0.001262 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.177.4 | 0.000422 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.177.80 | 0.003824 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.177.82 | 0.000955 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.177.86 | 0.000367 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.179 | 0.007519 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | B.1.221 | 0.000142 |
ORF3a | 100 | G100R | Ggc | Cgc | 2 | 2 | B.1.234 | 0.000264 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.236 | 0.004107 |
ORF3a | 100 | G100F | GGc | TTc | 2 | 2 | B.1.243 | 0.000139 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.311 | 0.000549 |
ORF3a | 100 | G100D | gGc | gAc | 2 | 2 | B.1.36 | 0.000292 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.36.31 | 0.003503 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | B.1.36.31 | 0.003503 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.36.8 | 0.002 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | B.1.397 | 0.009709 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | B.1.429 | 0.000047 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.466.2 | 0.000782 |
ORF3a | 100 | G100S | Ggc | Agc | 2 | 2 | B.1.516 | 0.003914 |
ORF3a | 100 | G100A | gGc | gCc | 2 | 2 | B.1.524 | 0.002813 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.576 | 0.001813 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.596 | 0.000174 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.605 | 0.011905 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.623 | 0.001073 |
ORF3a | 100 | G100del1 | Ggc | -gc | 2 | 2 | B.1.627 | 0.00404 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | B.1.637 | 0.000146 |
ORF3a | 100 | G100X | GGC | TAA | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 100 | G100X | GgC | TgA | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 100 | G100G | ggC | ggT | 2 | 2 | C.37 | 0.000232 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | P.1.12 | 0.000968 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | P.1.14 | 0.000096 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | P.6 | 0.006289 |
ORF3a | 100 | G100C | Ggc | Tgc | 2 | 2 | Q.2 | 0.001227 |
ORF3a | 100 | G100V | gGc | gTc | 2 | 2 | Q.8 | 0.00033 |
ORF3a | 100 | G100W | GgC | TgG | 1 | 1 | 0.055556 | |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | A | 0.000387 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | A.2 | 0.000662 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | A.2 | 0.000662 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | A.2.2 | 0.001689 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | A.2.4 | 0.003367 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | A.2.5 | 0.000499 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | A.29 | 0.005319 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | A.5 | 0.001923 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AD.2 | 0.000219 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AE.4 | 0.043478 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AE.8 | 0.000489 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AE.8 | 0.000489 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AH.3 | 0.003802 |
ORF3a | 100 | G100W | GgC | TgG | 1 | 1 | All | 0 |
ORF3a | 100 | G100del2 | gGC | g-- | 1 | 1 | All | 0 |
ORF3a | 100 | G100H | GGc | CAc | 1 | 1 | All | 0 |
ORF3a | 100 | G100Y | GGc | TAc | 1 | 1 | All | 0 |
ORF3a | 100 | G100Q | GGC | CAA | 1 | 1 | All | 0 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AV.1 | 0.005051 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.1 | 0.000396 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.10 | 0.00053 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.100 | 0.000046 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.101 | 0.00049 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.104 | 0.001984 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.106 | 0.000335 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.107 | 0.000466 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.108 | 0.001103 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.115 | 0.005208 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.116 | 0.000287 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.116.1 | 0.000311 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.117 | 0.000085 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.117 | 0.000085 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.12 | 0.000316 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.120.1 | 0.000321 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.2 | 0.000356 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.23 | 0.00007 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.23 | 0.00007 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.26 | 0.000028 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.29 | 0.000016 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.29 | 0.000016 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.3.1 | 0.000085 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.3.1 | 0.000085 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.3.1 | 0.000085 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.30 | 0.000396 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.32 | 0.000532 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.34 | 0.000097 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.34.1 | 0.00051 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.35 | 0.000233 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.35 | 0.000233 |
ORF3a | 100 | G100del1 | ggC | gg- | 1 | 1 | AY.35 | 0.000233 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.37 | 0.000316 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.37 | 0.000316 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 100 | G100N | GGc | AAc | 1 | 1 | AY.4 | 0.000002 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.4.2 | 0.000022 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.41 | 0.000294 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 100 | G100del2 | gGC | g-- | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 100 | G100F | GGc | TTc | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.46 | 0.000104 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.46.1 | 0.001027 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.46.5 | 0.000198 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.47 | 0.000031 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.5 | 0.000021 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.5.1 | 0.003759 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.5.3 | 0.000337 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.50 | 0.000799 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.51 | 0.000909 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.52 | 0.000814 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.54 | 0.000095 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.55 | 0.000917 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.57 | 0.000656 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.6 | 0.000041 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.61 | 0.000105 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.62 | 0.000436 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.67 | 0.000464 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.7.1 | 0.000113 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.7.1 | 0.000113 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.71 | 0.000475 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.74 | 0.000116 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.75.1 | 0.00018 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.78 | 0.001541 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.79 | 0.001211 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.86 | 0.00083 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | AY.88 | 0.000884 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.89 | 0.004902 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.9.2 | 0.000037 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.9.2 | 0.000037 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.99 | 0.001049 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | AY.99.2 | 0.000092 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | AY.99.2 | 0.000092 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | AZ.2 | 0.000821 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | AZ.5 | 0.003509 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B | 0.000128 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B | 0.000128 |
ORF3a | 100 | G100X | GgC | TgA | 1 | 1 | B.1 | 0.000009 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.1 | 0.000327 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.129 | 0.009174 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.134 | 0.011364 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.135 | 0.004695 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.155 | 0.071429 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 1 | B.1.1.161 | 0.003534 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.1.163 | 0.007634 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.164 | 0.005155 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.171 | 0.003676 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.172 | 0.018182 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.1.189 | 0.001513 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.192 | 0.002309 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.210 | 0.005714 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.219 | 0.005 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.222 | 0.000204 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.265 | 0.003155 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.277 | 0.000759 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 1 | B.1.1.304 | 0.002809 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.311 | 0.000358 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.317 | 0.000412 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.322 | 0.008772 |
ORF3a | 100 | G100G | ggC | ggG | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.329 | 0.003846 |
ORF3a | 100 | G100R | GgC | AgA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100K | GGC | AAA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100N | GGc | AAc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100E | gGC | gAA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.334 | 0.016393 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.337 | 0.003597 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.1.361 | 0.045455 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.365 | 0.005587 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.368 | 0.003086 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.1.376 | 0.005952 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.380 | 0.009804 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.388 | 0.045455 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.389 | 0.006061 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.397 | 0.002252 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.1.420 | 0.001006 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.425 | 0.045455 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 1 | B.1.1.434 | 0.000349 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.442 | 0.018519 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.485 | 0.016667 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.51 | 0.001718 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.521 | 0.005348 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.523 | 0.001563 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.1.525 | 0.005464 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF3a | 100 | G100K | GGC | AAA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.104 | 0.00369 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.105 | 0.009615 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.111 | 0.001175 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.139 | 0.000733 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.157 | 0.002985 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.160.16 | 0.000929 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.160.23 | 0.004831 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.170 | 0.00431 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.177.14 | 0.006098 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 1 | B.1.177.20 | 0.001517 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.35 | 0.000691 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.44 | 0.000519 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.51 | 0.004566 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.56 | 0.000668 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.57 | 0.000281 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.177.62 | 0.001192 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.63 | 0.002703 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.177.7 | 0.000165 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.206 | 0.000816 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.210 | 0.002132 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.212 | 0.016667 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.214 | 0.003663 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.22 | 0.001318 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.221 | 0.000071 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.221 | 0.000071 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 1 | B.1.234 | 0.000132 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.239 | 0.001221 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.240 | 0.000216 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.264 | 0.012346 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.279 | 0.000514 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.298 | 0.002114 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.301 | 0.005917 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.311 | 0.000275 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.351 | 0.00003 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.351.3 | 0.000876 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.351.5 | 0.0006 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.36.12 | 0.009615 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.36.21 | 0.00216 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.36.22 | 0.001208 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.36.27 | 0.000763 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.36.36 | 0.000602 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.36.38 | 0.001642 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.36.8 | 0.001 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.362 | 0.001541 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.362.2 | 0.004717 |
ORF3a | 100 | G100S | GGc | TCc | 1 | 1 | B.1.362.2 | 0.004717 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.367 | 0.000792 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.381 | 0.007812 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.396 | 0.000706 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.416 | 0.001269 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.428 | 0.00102 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.439 | 0.005917 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.453 | 0.003236 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.456 | 0.003268 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.456 | 0.003268 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.468 | 0.005714 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.468 | 0.005714 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.469 | 0.00361 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.470 | 0.001404 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.471 | 0.002732 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.497 | 0.000315 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.501 | 0.007353 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.517 | 0.000427 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.523 | 0.002451 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.525 | 0.000113 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 1 | B.1.526 | 0.000024 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.527 | 0.003704 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.540 | 0.009709 |
ORF3a | 100 | G100A | gGc | gCc | 1 | 1 | B.1.544 | 0.006024 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.554 | 0.004405 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.556 | 0.007519 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.560 | 0.00463 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.567 | 0.003333 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.570 | 0.002941 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.1.575 | 0.000303 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.577 | 0.000687 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.599 | 0.00365 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.617.3 | 0.002985 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.619 | 0.000871 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.621 | 0.000089 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | B.1.621 | 0.000089 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100H | GGc | CAc | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100N | GGc | AAc | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100G | ggC | ggA | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100Y | GGc | TAc | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100K | GGC | AAA | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100Q | GGC | CAA | 1 | 1 | B.1.91 | 0.002075 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | B.1.93 | 0.000934 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.28 | 0.003279 |
ORF3a | 100 | G100X | GgC | TgA | 1 | 1 | B.31 | 0.003731 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | B.40 | 0.000364 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | B.6 | 0.00091 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | B.6.6 | 0.000889 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | C.26 | 0.007353 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | C.26 | 0.007353 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | C.30.1 | 0.006711 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | C.36 | 0.000911 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | C.37 | 0.000116 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | C.37 | 0.000116 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | C.37 | 0.000116 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | C.37 | 0.000116 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | L.3 | 0.003546 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | N.3 | 0.005814 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | N.5 | 0.001767 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | P.1 | 0.000016 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 100 | G100R | Ggc | Cgc | 1 | 1 | P.1.14 | 0.000048 |
ORF3a | 100 | G100V | gGc | gTc | 1 | 1 | P.2 | 0.000187 |
ORF3a | 100 | G100D | gGc | gAc | 1 | 1 | Q.1 | 0.000126 |
ORF3a | 100 | G100C | Ggc | Tgc | 1 | 1 | Q.4 | 0.000455 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | Q.4 | 0.000455 |
ORF3a | 100 | G100G | ggC | ggT | 1 | 1 | Q.6 | 0.006623 |
ORF3a | 100 | G100S | Ggc | Agc | 1 | 1 | Q.8 | 0.000165 |
ORF3a | 100 | G100del | GGC | --- | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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