CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 100

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a100G100CnonsynGgcTgc19624195200.994725690-25692
ORF3a100G100CnonsynGgCTgT196241040.0052996325690-25692
ORF3a100G100VnonsyngGcgTc245824560.99918625690-25692
ORF3a100G100VnonsyngGCgTA245810.00040683525690-25692
ORF3a100G100VnonsyngGCgTT245810.00040683525690-25692
ORF3a100G100DnonsyngGcgAc139513940.99928325690-25692
ORF3a100G100DnonsyngGCgAT139510.00071684625690-25692
ORF3a100G100GsynggCggT111710820.96866625690-25692
ORF3a100G100GsynggCggA1117200.017905125690-25692
ORF3a100G100GsynggCggG1117150.013428825690-25692
ORF3a100G100SnonsynGgcAgc106810650.99719125690-25692
ORF3a100G100SnonsynGGcTCc106820.0018726625690-25692
ORF3a100G100SnonsynGGCTCA106810.0009363325690-25692
ORF3a100G100RnonsynGgcCgc2001930.96525690-25692
ORF3a100G100RnonsynGgCAgA20020.0125690-25692
ORF3a100G100RnonsynGgCCgA20020.0125690-25692
ORF3a100G100RnonsynGgCAgG20020.0125690-25692
ORF3a100G100RnonsynGgCCgT20010.00525690-25692
ORF3a100G100deldelGGC---146146125690-25692
ORF3a100G100AnonsyngGcgCc26240.92307725690-25692
ORF3a100G100AnonsyngGCgCT2610.038461525690-25692
ORF3a100G100AnonsyngGCgCA2610.038461525690-25692
ORF3a100G100FnonsynGGcTTc18170.94444425690-25692
ORF3a100G100FnonsynGGCTTT1810.055555625690-25692
ORF3a100G100NnonsynGGcAAc55125690-25692
ORF3a100G100KnonsynGGCAAA530.625690-25692
ORF3a100G100KnonsynGGCAAG520.425690-25692
ORF3a100G100XnonsynGgCTgA430.7525690-25692
ORF3a100G100XnonsynGGCTAA410.2525690-25692
ORF3a100G100del1delGgc-gc320.66666725690-25692
ORF3a100G100EnonsyngGCgAG320.66666725690-25692
ORF3a100G100EnonsyngGCgAA310.33333325690-25692
ORF3a100G100del1delggCgg-310.33333325690-25692
ORF3a100G100InonsynGGcATc22125690-25692
ORF3a100G100LnonsynGGCCTT210.525690-25692
ORF3a100G100LnonsynGGcCTc210.525690-25692
ORF3a100G100del2delgGCg--11125690-25692
ORF3a100G100WnonsynGgCTgG11125690-25692
ORF3a100G100YnonsynGGcTAc11125690-25692
ORF3a100G100HnonsynGGcCAc11125690-25692
ORF3a100G100QnonsynGGCCAA11125690-25692

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a100G100CGgcTgc1952019624All0.003733
ORF3a100G100CGgCTgT10419624All0.00002
ORF3a100G100CGgcTgc91719271B.1.1.70.00821
ORF3a100G100CGgCTgT1009271B.1.1.70.00009
ORF3a100G100VgGcgTc24562458All0.00047
ORF3a100G100VgGCgTA12458All0
ORF3a100G100VgGCgTT12458All0
ORF3a100G100CGgcTgc23532353AY.40.003662
ORF3a100G100VgGcgTc14031403AY.640.835119
ORF3a100G100DgGcgAc13941395All0.000267
ORF3a100G100DgGCgAT11395All0
ORF3a100G100GggCggT10821117All0.000207
ORF3a100G100GggCggA201117All0.000004
ORF3a100G100GggCggG151117All0.000003
ORF3a100G100SGgcAgc10651068All0.000204
ORF3a100G100SGGcTCc21068All0
ORF3a100G100SGGCTCA11068All0
ORF3a100G100CGgcTgc10001000AY.1030.006209
ORF3a100G100DgGcgAc917917B.1.1.70.000821
ORF3a100G100CGgcTgc620622B.1.617.20.002335
ORF3a100G100CGgCTgT2622B.1.617.20.000008
ORF3a100G100CGgcTgc521521AY.30.005182
ORF3a100G100SGgcAgc491491AY.250.002953
ORF3a100G100CGgcTgc484484AY.430.002144
ORF3a100G100CGgcTgc472472AY.440.002873
ORF3a100G100CGgcTgc329329B.1.20.002897
ORF3a100G100VgGcgTc319319B.1.1.70.000286
ORF3a100G100GggCggT265267AY.40.000412
ORF3a100G100GggCggA2267AY.40.000003
ORF3a100G100CGgcTgc237237AY.420.009535
ORF3a100G100CGgcTgc212212B.1.1770.002792
ORF3a100G100RGgcCgc193200All0.000037
ORF3a100G100RGgCAgA2200All0
ORF3a100G100RGgCAgG2200All0
ORF3a100G100RGgCCgA2200All0
ORF3a100G100RGgCCgT1200All0
ORF3a100G100CGgcTgc182182AY.1020.004826
ORF3a100G100CGgcTgc181181B.10.001658
ORF3a100G100CGgcTgc170170AY.250.001023
ORF3a100G100delGGC---146146All0.000028
ORF3a100G100CGgcTgc136136B.1.10.002467
ORF3a100G100CGgcTgc134134AY.390.003311
ORF3a100G100CGgcTgc132132AY.99.20.012165
ORF3a100G100DgGcgAc123123B.1.258.110.048751
ORF3a100G100DgGcgAc119119B.1.617.10.015347
ORF3a100G100CGgcTgc118118AY.9.10.009879
ORF3a100G100CGgcTgc116116AY.1200.004313
ORF3a100G100RGgcCgc116116AY.610.012154
ORF3a100G100GggCggT112114B.1.1.70.0001
ORF3a100G100GggCggA2114B.1.1.70.000002
ORF3a100G100CGgcTgc107107AY.260.003029
ORF3a100G100CGgcTgc100100AY.1180.006265
ORF3a100G100CGgcTgc100100B.1.177.270.943396
ORF3a100G100CGgcTgc9999Q.10.012506
ORF3a100G100VgGcgTc9898B.1.1.2910.072754
ORF3a100G100CGgcTgc9191B.1.4290.002141
ORF3a100G100VgGcgTc9191B.1.617.20.000343
ORF3a100G100SGgcAgc8585B.1.1.70.000076
ORF3a100G100CGgcTgc8484AY.50.001735
ORF3a100G100VgGcgTc8181AY.40.000126
ORF3a100G100CGgcTgc8181B.1.258.170.008422
ORF3a100G100CGgcTgc7979AY.1090.058432
ORF3a100G100CGgcTgc7676B.1.3510.002259
ORF3a100G100SGgcAgc7575AY.40.000117
ORF3a100G100CGgcTgc7575B.1.1.2220.0153
ORF3a100G100CGgcTgc6868P.10.001071
ORF3a100G100VgGcgTc6565B.1.20.000572
ORF3a100G100CGgcTgc6363AY.330.004207
ORF3a100G100CGgcTgc6161B.1.4000.026169
ORF3a100G100GggCggT5757B.1.141
ORF3a100G100CGgcTgc5454B.1.1.5190.002144
ORF3a100G100GggCggT5454B.1.1770.000711
ORF3a100G100GggCggT5454B.1.6370.003946
ORF3a100G100CGgcTgc5252B.1.1600.001622
ORF3a100G100DgGcgAc5151B.1.3890.051102
ORF3a100G100GggCggT5050AY.1030.00031
ORF3a100G100CGgcTgc4848B.1.177.160.031894
ORF3a100G100CGgcTgc4040AY.4.2.10.005959
ORF3a100G100CGgcTgc3939AY.98.10.001889
ORF3a100G100CGgcTgc3737AY.740.004279
ORF3a100G100GggCggT3636AY.260.001019
ORF3a100G100delGGC---3636B.1.1.70.000032
ORF3a100G100GggCggT3336B.1.617.20.000124
ORF3a100G100GggCggG336B.1.617.20.000011
ORF3a100G100VgGcgTc3333AY.430.000146
ORF3a100G100VgGcgTc3232AY.980.002528
ORF3a100G100CGgcTgc3232B.1.1.3060.014029
ORF3a100G100DgGcgAc3131B.10.000284
ORF3a100G100CGgcTgc3030AY.910.021914
ORF3a100G100CGgcTgc3030B.1.1.120.223881
ORF3a100G100CGgcTgc3030C.360.027322
ORF3a100G100SGgcAgc2929AY.30.000288
ORF3a100G100SGgcAgc2929AY.46.60.002094
ORF3a100G100GggCggT2929AY.99.20.002673
ORF3a100G100CGgcTgc2828AY.340.002715
ORF3a100G100CGgcTgc2828B.1.2580.001863
ORF3a100G100CGgcTgc2828C.370.00325
ORF3a100G100SGgcAgc2727AY.1030.000168
ORF3a100G100SGgcAgc2727AY.140.002376
ORF3a100G100CGgcTgc2727AY.460.00281
ORF3a100G100CGgcTgc2727AY.750.001513
ORF3a100G100CGgcTgc2727AY.9.20.000992
ORF3a100G100CGgcTgc2727B.1.3990.052224
ORF3a100G100GggCggT2727B.1.5270.1
ORF3a100G100AgGcgCc2426All0.000005
ORF3a100G100AgGCgCT126All0
ORF3a100G100AgGCgCA126All0
ORF3a100G100CGgcTgc2626AY.1060.008707
ORF3a100G100CGgcTgc2525AE.80.012225
ORF3a100G100VgGcgTc2525AY.250.00015
ORF3a100G100CGgcTgc2525AY.290.000394
ORF3a100G100CGgcTgc2525B.1.360.003648
ORF3a100G100CGgcTgc2323B.1.5950.006002
ORF3a100G100GggCggT2222AY.250.000132
ORF3a100G100SGgcAgc2222AY.440.000134
ORF3a100G100GggCggT2122P.10.000331
ORF3a100G100GggCggG122P.10.000016
ORF3a100G100VgGcgTc2121AY.650.011194
ORF3a100G100GggCggT2121B.1.36.180.008824
ORF3a100G100CGgcTgc2121P.1.170.003397
ORF3a100G100VgGcgTc1920AY.440.000116
ORF3a100G100VgGCgTA120AY.440.000006
ORF3a100G100CGgcTgc2020B.1.1.2260.116279
ORF3a100G100CGgcTgc2020Q.30.002901
ORF3a100G100CGgcTgc1919AY.1000.000874
ORF3a100G100GggCggT1919AY.116.10.005917
ORF3a100G100CGgcTgc1919AY.1190.000671
ORF3a100G100RGgcCgc1919B.1.1.70.000017
ORF3a100G100CGgcTgc1919B.1.2320.01021
ORF3a100G100SGgcAgc1919B.1.617.20.000072
ORF3a100G100CGgcTgc1919R.10.00171
ORF3a100G100FGGcTTc1718All0.000003
ORF3a100G100FGGCTTT118All0
ORF3a100G100CGgcTgc1818AY.1170.001521
ORF3a100G100GggCggT1818AY.290.000284
ORF3a100G100DgGcgAc1818AY.40.000028
ORF3a100G100CGgcTgc1818B.1.1.2410.037267
ORF3a100G100SGgcAgc1818B.1.20.000158
ORF3a100G100SGgcAgc1818R.10.00162
ORF3a100G100SGgcAgc1717AY.430.000075
ORF3a100G100CGgcTgc1717AY.5.40.004704
ORF3a100G100CGgcTgc1717AY.70.003332
ORF3a100G100VgGcgTc1717AY.9.20.000624
ORF3a100G100CGgcTgc1717B.1.1.2940.021519
ORF3a100G100GggCggT1617B.1.3510.000476
ORF3a100G100GggCggA117B.1.3510.00003
ORF3a100G100CGgcTgc1717B.1.351.20.005144
ORF3a100G100SGgcAgc1717B.1.4290.0004
ORF3a100G100CGgcTgc1717P.1.17.10.014873
ORF3a100G100CGgcTgc1616AY.4.20.000347
ORF3a100G100CGgcTgc1616B.1.5090.013853
ORF3a100G100CGgcTgc1616B.1.5260.000376
ORF3a100G100CGgcTgc1616P.1.140.000765
ORF3a100G100CGgcTgc1515AY.200.000583
ORF3a100G100CGgcTgc1515AY.470.000467
ORF3a100G100CGgcTgc1515AY.840.006562
ORF3a100G100SGgcAgc1315B.10.000119
ORF3a100G100SGGCTCA115B.10.000009
ORF3a100G100SGGcTCc115B.10.000009
ORF3a100G100CGgcTgc1515B.1.5610.005955
ORF3a100G100CGgcTgc1414AY.230.000976
ORF3a100G100CGgcTgc1414AY.590.007415
ORF3a100G100SGgcAgc1313AY.1190.000459
ORF3a100G100CGgcTgc1313AY.610.001362
ORF3a100G100delGGC---1313B.10.000119
ORF3a100G100CGgcTgc1313B.1.5820.006379
ORF3a100G100CGgcTgc1313D.20.000976
ORF3a100G100CGgcTgc1313Q.80.002144
ORF3a100G100VgGcgTc1212AY.1030.000075
ORF3a100G100CGgcTgc1212AY.1140.002773
ORF3a100G100VgGcgTc1212AY.1190.000424
ORF3a100G100CGgcTgc1212AY.700.002502
ORF3a100G100CGgcTgc1212AY.730.007984
ORF3a100G100CGgcTgc1212AY.90.000811
ORF3a100G100CGgcTgc1212B.1.1.1890.018154
ORF3a100G100CGgcTgc1212B.1.1.3120.022945
ORF3a100G100CGgcTgc1212B.1.3620.01849
ORF3a100G100VgGcgTc1212P.10.000189
ORF3a100G100CGgcTgc1111B.1.1.160.611111
ORF3a100G100CGgcTgc1111B.1.1.3180.003319
ORF3a100G100CGgcTgc1111B.1.2100.023454
ORF3a100G100CGgcTgc1011B.1.2210.00071
ORF3a100G100CGgCTgT111B.1.2210.000071
ORF3a100G100SGgcAgc1111B.1.3510.000327
ORF3a100G100VgGcgTc1010AY.1020.000265
ORF3a100G100DgGcgAc1010AY.250.00006
ORF3a100G100GggCggT810AY.430.000035
ORF3a100G100GggCggA210AY.430.000009
ORF3a100G100GggCggT1010AY.440.000061
ORF3a100G100GggCggT1010AY.450.001217
ORF3a100G100CGgcTgc1010AY.60.000411
ORF3a100G100VgGcgTc1010AY.99.20.000922
ORF3a100G100GggCggT810B.10.000073
ORF3a100G100GggCggA210B.10.000018
ORF3a100G100SGgcAgc1010B.1.10.000181
ORF3a100G100CGgcTgc1010B.1.1.1210.024272
ORF3a100G100delGGC---1010B.1.1770.000132
ORF3a100G100GggCggT1010B.1.20.000088
ORF3a100G100CGgcTgc1010B.1.2340.001319
ORF3a100G100GggCggT1010B.1.36.240.061728
ORF3a100G100CGgcTgc1010B.1.4270.000505
ORF3a100G100CGgcTgc1010C.160.010604
ORF3a100G100VgGcgTc99AY.130.001449
ORF3a100G100delGGC---99AY.430.00004
ORF3a100G100VgGcgTc99AY.50.000186
ORF3a100G100CGgcTgc99AY.75.10.001623
ORF3a100G100GggCggT59B.1.10.000091
ORF3a100G100GggCggA39B.1.10.000054
ORF3a100G100GggCggG19B.1.10.000018
ORF3a100G100GggCggT99B.1.177.860.001651
ORF3a100G100CGgcTgc99B.1.2430.000626
ORF3a100G100delGGC---99B.1.3510.000268
ORF3a100G100CGgcTgc99B.1.36.290.004656
ORF3a100G100CGgcTgc99B.1.428.20.3
ORF3a100G100CGgcTgc99B.1.617.10.001161
ORF3a100G100DgGcgAc99Q.80.001484
ORF3a100G100GggCggG480.222222
ORF3a100G100GggCggA280.111111
ORF3a100G100GggCggT280.111111
ORF3a100G100GggCggT88AY.30.00008
ORF3a100G100CGgcTgc88AY.3.10.000682
ORF3a100G100CGgcTgc88AY.39.10.000317
ORF3a100G100GggCggT88AY.420.000322
ORF3a100G100VgGcgTc88B.1.10.000145
ORF3a100G100VgGcgTc88B.1.1.2170.029091
ORF3a100G100CGgcTgc88B.1.4740.015209
ORF3a100G100CGgcTgc88B.1.5640.003407
ORF3a100G100DgGcgAc88B.1.617.20.00003
ORF3a100G100CGgcTgc77AY.1130.000997
ORF3a100G100GggCggT77AY.46.20.004447
ORF3a100G100CGgcTgc77AY.46.60.000505
ORF3a100G100DgGcgAc77B.1.1.1570.006393
ORF3a100G100CGgcTgc77B.1.1.1590.03271
ORF3a100G100CGgcTgc77B.1.1.2160.006233
ORF3a100G100CGgcTgc77B.1.1.2320.012704
ORF3a100G100VgGcgTc77B.1.1770.000092
ORF3a100G100SGgcAgc77B.1.4670.28
ORF3a100G100VgGcgTc77D.20.000525
ORF3a100G100delGGC---77P.10.00011
ORF3a100G100GggCggT66AY.1000.000276
ORF3a100G100GggCggT66AY.130.000966
ORF3a100G100RGgcCgc66AY.40.000009
ORF3a100G100RGgcCgc66AY.430.000027
ORF3a100G100DgGcgAc66AY.440.000037
ORF3a100G100RGgcCgc66AY.540.000572
ORF3a100G100CGgcTgc66AY.560.009631
ORF3a100G100CGgcTgc66AY.770.006764
ORF3a100G100VgGcgTc66B.10.000055
ORF3a100G100DgGcgAc66B.1.10.000109
ORF3a100G100CGgcTgc66B.1.1.3170.00247
ORF3a100G100CGgcTgc66B.1.1.3690.002677
ORF3a100G100CGgcTgc66B.1.1.500.004073
ORF3a100G100GggCggT56B.1.1600.000156
ORF3a100G100GggCggA16B.1.1600.000031
ORF3a100G100DgGcgAc66B.1.20.000053
ORF3a100G100AgGcgCc66B.1.20.000053
ORF3a100G100SGgcAgc66B.1.2400.001293
ORF3a100G100VgGcgTc66B.1.3510.000178
ORF3a100G100GggCggT66B.1.5260.000141
ORF3a100G100GggCggT66B.1.617.10.000774
ORF3a100G100CGgcTgc66B.1.6210.000531
ORF3a100G100RGgcCgc66B.1.6250.014118
ORF3a100G100NGGcAAc55All0.000001
ORF3a100G100KGGCAAA35All0.000001
ORF3a100G100KGGCAAG25All0
ORF3a100G100GggCggT45AY.1020.000106
ORF3a100G100GggCggG15AY.1020.000027
ORF3a100G100GggCggT55AY.1130.000712
ORF3a100G100AgGcgCc55AY.1160.001434
ORF3a100G100GggCggT45AY.1180.000251
ORF3a100G100GggCggA15AY.1180.000063
ORF3a100G100VgGcgTc55AY.1200.000186
ORF3a100G100VgGcgTc55AY.240.002155
ORF3a100G100DgGcgAc55AY.260.000142
ORF3a100G100VgGcgTc55AY.30.00005
ORF3a100G100CGgcTgc55AY.34.10.00255
ORF3a100G100GggCggT35AY.390.000074
ORF3a100G100GggCggG25AY.390.000049
ORF3a100G100VgGcgTc55AY.4.20.000108
ORF3a100G100GggCggT55AY.4.20.000108
ORF3a100G100VgGcgTc55AY.4.50.000537
ORF3a100G100CGgcTgc55AY.710.002375
ORF3a100G100CGgcTgc55AY.950.003805
ORF3a100G100CGgcTgc55B.1.1.1530.005476
ORF3a100G100CGgcTgc55B.1.1.330.002104
ORF3a100G100GggCggT55B.1.1.3970.011261
ORF3a100G100CGgcTgc55B.1.1.4860.007886
ORF3a100G100SGgcAgc55B.1.1.5190.000199
ORF3a100G100SGgcAgc55B.1.1600.000156
ORF3a100G100SGgcAgc55B.1.1770.000066
ORF3a100G100GggCggT55B.1.2210.000355
ORF3a100G100SGgcAgc55B.1.2580.000333
ORF3a100G100DgGcgAc55B.1.36.80.005
ORF3a100G100CGgcTgc55B.1.4030.01634
ORF3a100G100CGgcTgc55B.1.4110.018519
ORF3a100G100GggCggT55B.1.4290.000118
ORF3a100G100DgGcgAc55B.1.4290.000118
ORF3a100G100delGGC---55B.1.5250.000566
ORF3a100G100RGgcCgc25B.1.910.004149
ORF3a100G100RGgCCgA25B.1.910.004149
ORF3a100G100RGgCAgA15B.1.910.002075
ORF3a100G100RGgCAgG240.111111
ORF3a100G100RGgcCgc140.055556
ORF3a100G100RGgCCgT140.055556
ORF3a100G100XGgCTgA34All0.000001
ORF3a100G100XGGCTAA14All0
ORF3a100G100SGgcAgc44AY.1020.000106
ORF3a100G100CGgcTgc44AY.16.10.00188
ORF3a100G100CGgcTgc44AY.190.004561
ORF3a100G100CGgcTgc44AY.240.001724
ORF3a100G100SGgcAgc44AY.260.000113
ORF3a100G100DgGcgAc44AY.30.00004
ORF3a100G100SGgcAgc44AY.320.00213
ORF3a100G100VgGcgTc44AY.390.000099
ORF3a100G100SGgcAgc44AY.390.000099
ORF3a100G100SGgcAgc44AY.50.000083
ORF3a100G100CGgcTgc44AY.540.000381
ORF3a100G100VgGcgTc44AY.610.000419
ORF3a100G100CGgcTgc44AY.680.001095
ORF3a100G100CGgcTgc44AY.7.10.000451
ORF3a100G100CGgcTgc44AY.980.000316
ORF3a100G100CGgcTgc44AY.990.004197
ORF3a100G100VgGcgTc44B.1.1.2140.000222
ORF3a100G100DgGcgAc44B.1.1.2770.003035
ORF3a100G100CGgcTgc44B.1.1.390.002039
ORF3a100G100VgGcgTc44B.1.177.860.000734
ORF3a100G100RGgcCgc44B.1.177.870.002911
ORF3a100G100VgGcgTc44B.1.2410.003247
ORF3a100G100RGgcCgc44B.1.3130.026316
ORF3a100G100VgGcgTc44B.1.360.000584
ORF3a100G100CGgcTgc44B.1.36.170.001976
ORF3a100G100CGgcTgc44B.1.5250.000453
ORF3a100G100SGgcAgc44B.1.5260.000094
ORF3a100G100VgGcgTc44B.1.5700.011765
ORF3a100G100CGgcTgc44B.1.5910.042553
ORF3a100G100delGGC---44P.1.150.000929
ORF3a100G100CGgcTgc44P.1.70.001277
ORF3a100G100CGgcTgc44P.20.000747
ORF3a100G100CGgcTgc230.111111
ORF3a100G100CGgCTgT130.055556
ORF3a100G100EgGCgAG23All0
ORF3a100G100del1Ggc-gc23All0
ORF3a100G100del1ggCgg-13All0
ORF3a100G100EgGCgAA13All0
ORF3a100G100SGgcAgc33AY.1000.000138
ORF3a100G100DgGcgAc33AY.1020.00008
ORF3a100G100VgGcgTc33AY.1050.001929
ORF3a100G100CGgcTgc33AY.1080.003308
ORF3a100G100VgGcgTc33AY.1180.000188
ORF3a100G100CGgcTgc33AY.1210.000406
ORF3a100G100GggCggT33AY.1210.000406
ORF3a100G100CGgcTgc33AY.130.000483
ORF3a100G100SGgcAgc33AY.200.000117
ORF3a100G100delGGC---33AY.230.000209
ORF3a100G100delGGC---33AY.250.000018
ORF3a100G100CGgcTgc33AY.270.000194
ORF3a100G100VgGcgTc33AY.330.0002
ORF3a100G100CGgcTgc33AY.360.000445
ORF3a100G100FGGcTTc33AY.40.000005
ORF3a100G100GggCggT33AY.4.40.001227
ORF3a100G100delGGC---33AY.4.50.000322
ORF3a100G100DgGcgAc23AY.430.000009
ORF3a100G100DgGCgAT13AY.430.000004
ORF3a100G100CGgcTgc33AY.450.000365
ORF3a100G100CGgcTgc33AY.46.40.000494
ORF3a100G100SGgcAgc33AY.470.000093
ORF3a100G100CGgcTgc33AY.480.001395
ORF3a100G100CGgcTgc33AY.490.009585
ORF3a100G100CGgcTgc33AY.530.000863
ORF3a100G100VgGcgTc33AY.600.002814
ORF3a100G100VgGcgTc33AY.670.001393
ORF3a100G100GggCggT33AY.9.10.000251
ORF3a100G100CGgcTgc33B.1.1.2140.000166
ORF3a100G100SGgcAgc33B.1.1.2530.007519
ORF3a100G100CGgcTgc33B.1.1.2860.008696
ORF3a100G100GggCggT33B.1.1.3060.001315
ORF3a100G100SGgcAgc33B.1.1.330.001263
ORF3a100G100GggCggT23B.1.1.5190.000079
ORF3a100G100GggCggG13B.1.1.5190.00004
ORF3a100G100CGgcTgc33B.1.1080.017442
ORF3a100G100CGgcTgc33B.1.1280.001906
ORF3a100G100DgGcgAc33B.1.1600.000094
ORF3a100G100RGgcCgc33B.1.20.000026
ORF3a100G100SGgcAgc33B.1.2340.000396
ORF3a100G100CGgcTgc33B.1.2410.002435
ORF3a100G100GggCggT33B.1.360.000438
ORF3a100G100CGgcTgc33B.1.3690.000856
ORF3a100G100CGgcTgc33B.1.3900.031915
ORF3a100G100CGgcTgc33B.1.3960.002117
ORF3a100G100CGgcTgc33B.1.4160.003807
ORF3a100G100SGgcAgc33B.1.4270.000151
ORF3a100G100DgGcgAc33B.1.4270.000151
ORF3a100G100CGgcTgc33B.1.4410.028846
ORF3a100G100CGgcTgc33B.1.5380.024194
ORF3a100G100CGgcTgc33B.1.5580.013699
ORF3a100G100CGgcTgc33B.1.5750.00091
ORF3a100G100CGgcTgc33B.1.6090.001438
ORF3a100G100delGGC---33B.1.617.20.000011
ORF3a100G100FGGcTTc33B.1.617.20.000011
ORF3a100G100CGgcTgc33B.1.6200.002838
ORF3a100G100delGGC---33B.1.6210.000266
ORF3a100G100CGgcTgc33B.1.621.10.001517
ORF3a100G100GggCggT33B.550.00885
ORF3a100G100FGGcTTc33C.360.002732
ORF3a100G100SGgcAgc33P.10.000047
ORF3a100G100CGgcTgc33P.1.10.000953
ORF3a100G100SGgcAgc220.111111
ORF3a100G100NGGcAAc220.111111
ORF3a100G100DgGcgAc220.111111
ORF3a100G100KGGCAAG220.111111
ORF3a100G100EgGCgAG220.111111
ORF3a100G100VgGCgTT120.055556
ORF3a100G100LGGCCTT120.055556
ORF3a100G100LGGcCTc120.055556
ORF3a100G100FGGCTTT120.055556
ORF3a100G100VgGcgTc120.055556
ORF3a100G100FGGcTTc120.055556
ORF3a100G100IGGcATc22All0
ORF3a100G100LGGCCTT12All0
ORF3a100G100LGGcCTc12All0
ORF3a100G100VgGcgTc22AY.1000.000092
ORF3a100G100delGGC---22AY.1000.000092
ORF3a100G100CGgcTgc22AY.1010.000981
ORF3a100G100DgGcgAc22AY.1030.000012
ORF3a100G100CGgcTgc22AY.1160.000574
ORF3a100G100CGgcTgc22AY.120.000632
ORF3a100G100SGgcAgc22AY.1200.000074
ORF3a100G100CGgcTgc22AY.120.20.002571
ORF3a100G100CGgcTgc22AY.120.2.10.000997
ORF3a100G100CGgcTgc22AY.140.000176
ORF3a100G100CGgcTgc22AY.160.000759
ORF3a100G100GggCggT22AY.20.000712
ORF3a100G100GggCggT22AY.200.000078
ORF3a100G100VgGcgTc22AY.230.000139
ORF3a100G100RGgcCgc22AY.250.000012
ORF3a100G100CGgcTgc22AY.29.10.000441
ORF3a100G100VgGcgTc22AY.300.000791
ORF3a100G100CGgcTgc22AY.320.001065
ORF3a100G100DgGcgAc22AY.330.000134
ORF3a100G100SGgcAgc22AY.360.000296
ORF3a100G100delGGC---22AY.40.000003
ORF3a100G100GggCggT22AY.4.10.001475
ORF3a100G100CGgcTgc22AY.4.30.001684
ORF3a100G100SGgcAgc22AY.4.40.000818
ORF3a100G100CGgcTgc22AY.4.40.000818
ORF3a100G100CGgcTgc22AY.4.50.000215
ORF3a100G100CGgcTgc22AY.400.001929
ORF3a100G100SGgcAgc22AY.420.00008
ORF3a100G100SGgcAgc22AY.460.000208
ORF3a100G100CGgcTgc22AY.46.20.001271
ORF3a100G100SGgcAgc22AY.46.40.000329
ORF3a100G100GggCggT22AY.470.000062
ORF3a100G100VgGcgTc22AY.5.30.000675
ORF3a100G100CGgcTgc22AY.520.001629
ORF3a100G100SGgcAgc22AY.530.000575
ORF3a100G100SGgcAgc22AY.540.000191
ORF3a100G100CGgcTgc22AY.580.001815
ORF3a100G100GggCggT22AY.610.00021
ORF3a100G100VgGcgTc22AY.620.000871
ORF3a100G100CGgcTgc22AY.630.000774
ORF3a100G100IGGcATc22AY.640.00119
ORF3a100G100VgGcgTc22AY.730.001331
ORF3a100G100VgGcgTc22AY.750.000112
ORF3a100G100DgGcgAc22AY.750.000112
ORF3a100G100VgGcgTc22AY.800.002257
ORF3a100G100CGgcTgc22AY.810.003984
ORF3a100G100CGgcTgc22AY.820.002714
ORF3a100G100SGgcAgc22AY.880.001768
ORF3a100G100AgGcgCc22AY.9.10.000167
ORF3a100G100GggCggT22AY.9.20.000073
ORF3a100G100CGgcTgc22AY.940.000885
ORF3a100G100SGgcAgc22AY.98.10.000097
ORF3a100G100VgGcgTc22B0.000256
ORF3a100G100CGgcTgc22B0.000256
ORF3a100G100RGgcCgc22B.10.000018
ORF3a100G100AgGcgCc12B.10.000009
ORF3a100G100AgGCgCA12B.10.000009
ORF3a100G100FGGcTTc22B.1.10.000036
ORF3a100G100CGgcTgc22B.1.1.1610.007067
ORF3a100G100CGgcTgc22B.1.1.1630.015267
ORF3a100G100VgGcgTc22B.1.1.2220.000408
ORF3a100G100CGgcTgc22B.1.1.250.001137
ORF3a100G100CGgcTgc22B.1.1.2560.027397
ORF3a100G100GggCggT22B.1.1.2790.002242
ORF3a100G100CGgcTgc22B.1.1.280.000622
ORF3a100G100CGgcTgc22B.1.1.3260.003521
ORF3a100G100CGgcTgc22B.1.1.3720.001377
ORF3a100G100GggCggT22B.1.1.390.001019
ORF3a100G100AgGcgCc12B.1.1.5190.00004
ORF3a100G100AgGCgCT12B.1.1.5190.00004
ORF3a100G100AgGcgCc22B.1.1.70.000002
ORF3a100G100FGGcTTc22B.1.1.70.000002
ORF3a100G100CGgcTgc22B.1.1270.004396
ORF3a100G100CGgcTgc22B.1.1470.001512
ORF3a100G100SGgcAgc22B.1.177.150.001262
ORF3a100G100CGgcTgc22B.1.177.40.000422
ORF3a100G100CGgcTgc22B.1.177.800.003824
ORF3a100G100CGgcTgc22B.1.177.820.000955
ORF3a100G100CGgcTgc22B.1.177.860.000367
ORF3a100G100CGgcTgc22B.1.1790.007519
ORF3a100G100DgGcgAc22B.1.2210.000142
ORF3a100G100RGgcCgc22B.1.2340.000264
ORF3a100G100CGgcTgc22B.1.2360.004107
ORF3a100G100FGGcTTc22B.1.2430.000139
ORF3a100G100CGgcTgc22B.1.3110.000549
ORF3a100G100DgGcgAc22B.1.360.000292
ORF3a100G100CGgcTgc22B.1.36.310.003503
ORF3a100G100VgGcgTc22B.1.36.310.003503
ORF3a100G100CGgcTgc22B.1.36.80.002
ORF3a100G100GggCggT22B.1.3970.009709
ORF3a100G100VgGcgTc22B.1.4290.000047
ORF3a100G100CGgcTgc22B.1.466.20.000782
ORF3a100G100SGgcAgc22B.1.5160.003914
ORF3a100G100AgGcgCc22B.1.5240.002813
ORF3a100G100CGgcTgc22B.1.5760.001813
ORF3a100G100CGgcTgc22B.1.5960.000174
ORF3a100G100CGgcTgc22B.1.6050.011905
ORF3a100G100CGgcTgc22B.1.6230.001073
ORF3a100G100del1Ggc-gc22B.1.6270.00404
ORF3a100G100CGgcTgc22B.1.6370.000146
ORF3a100G100XGGCTAA12B.1.910.002075
ORF3a100G100XGgCTgA12B.1.910.002075
ORF3a100G100GggCggT22C.370.000232
ORF3a100G100VgGcgTc22P.1.120.000968
ORF3a100G100VgGcgTc22P.1.140.000096
ORF3a100G100CGgcTgc22P.60.006289
ORF3a100G100CGgcTgc22Q.20.001227
ORF3a100G100VgGcgTc22Q.80.00033
ORF3a100G100WGgCTgG110.055556
ORF3a100G100delGGC---11A0.000387
ORF3a100G100SGgcAgc11A.20.000662
ORF3a100G100GggCggT11A.20.000662
ORF3a100G100CGgcTgc11A.2.20.001689
ORF3a100G100GggCggT11A.2.40.003367
ORF3a100G100CGgcTgc11A.2.50.000499
ORF3a100G100CGgcTgc11A.290.005319
ORF3a100G100CGgcTgc11A.50.001923
ORF3a100G100GggCggT11AD.20.000219
ORF3a100G100CGgcTgc11AE.40.043478
ORF3a100G100VgGcgTc11AE.80.000489
ORF3a100G100SGgcAgc11AE.80.000489
ORF3a100G100delGGC---11AH.30.003802
ORF3a100G100WGgCTgG11All0
ORF3a100G100del2gGCg--11All0
ORF3a100G100HGGcCAc11All0
ORF3a100G100YGGcTAc11All0
ORF3a100G100QGGCCAA11All0
ORF3a100G100delGGC---11AV.10.005051
ORF3a100G100CGgcTgc11AY.10.000396
ORF3a100G100VgGcgTc11AY.100.00053
ORF3a100G100DgGcgAc11AY.1000.000046
ORF3a100G100GggCggT11AY.1010.00049
ORF3a100G100CGgcTgc11AY.1040.001984
ORF3a100G100GggCggT11AY.1060.000335
ORF3a100G100DgGcgAc11AY.1070.000466
ORF3a100G100GggCggT11AY.1080.001103
ORF3a100G100delGGC---11AY.1080.001103
ORF3a100G100VgGcgTc11AY.1100.000113
ORF3a100G100CGgcTgc11AY.1100.000113
ORF3a100G100delGGC---11AY.1110.000183
ORF3a100G100DgGcgAc11AY.1130.000142
ORF3a100G100delGGC---11AY.1130.000142
ORF3a100G100CGgcTgc11AY.1150.005208
ORF3a100G100GggCggT11AY.1160.000287
ORF3a100G100CGgcTgc11AY.116.10.000311
ORF3a100G100SGgcAgc11AY.1170.000085
ORF3a100G100GggCggT11AY.1170.000085
ORF3a100G100DgGcgAc11AY.120.000316
ORF3a100G100GggCggT11AY.1200.000037
ORF3a100G100DgGcgAc11AY.1200.000037
ORF3a100G100CGgcTgc11AY.120.10.000321
ORF3a100G100DgGcgAc11AY.140.000088
ORF3a100G100RGgcCgc11AY.160.00038
ORF3a100G100VgGcgTc11AY.160.00038
ORF3a100G100GggCggT11AY.16.10.00047
ORF3a100G100VgGcgTc11AY.20.000356
ORF3a100G100delGGC---11AY.200.000039
ORF3a100G100DgGcgAc11AY.200.000039
ORF3a100G100VgGcgTc11AY.200.000039
ORF3a100G100SGgcAgc11AY.230.00007
ORF3a100G100GggCggT11AY.230.00007
ORF3a100G100RGgcCgc11AY.260.000028
ORF3a100G100GggCggT11AY.270.000065
ORF3a100G100SGgcAgc11AY.290.000016
ORF3a100G100delGGC---11AY.290.000016
ORF3a100G100SGgcAgc11AY.3.10.000085
ORF3a100G100VgGcgTc11AY.3.10.000085
ORF3a100G100DgGcgAc11AY.3.10.000085
ORF3a100G100SGgcAgc11AY.300.000396
ORF3a100G100GggCggT11AY.320.000532
ORF3a100G100SGgcAgc11AY.330.000067
ORF3a100G100delGGC---11AY.330.000067
ORF3a100G100GggCggT11AY.330.000067
ORF3a100G100GggCggT11AY.340.000097
ORF3a100G100delGGC---11AY.34.10.00051
ORF3a100G100DgGcgAc11AY.350.000233
ORF3a100G100delGGC---11AY.350.000233
ORF3a100G100del1ggCgg-11AY.350.000233
ORF3a100G100VgGcgTc11AY.370.000316
ORF3a100G100CGgcTgc11AY.370.000316
ORF3a100G100RGgcCgc11AY.390.000025
ORF3a100G100delGGC---11AY.390.000025
ORF3a100G100DgGcgAc11AY.390.000025
ORF3a100G100GggCggT11AY.39.10.00004
ORF3a100G100VgGcgTc11AY.39.10.00004
ORF3a100G100NGGcAAc11AY.40.000002
ORF3a100G100SGgcAgc11AY.4.20.000022
ORF3a100G100CGgcTgc11AY.410.000294
ORF3a100G100VgGcgTc11AY.420.00004
ORF3a100G100del2gGCg--11AY.430.000004
ORF3a100G100FGGcTTc11AY.430.000004
ORF3a100G100RGgcCgc11AY.440.000006
ORF3a100G100VgGcgTc11AY.450.000122
ORF3a100G100DgGcgAc11AY.450.000122
ORF3a100G100VgGcgTc11AY.460.000104
ORF3a100G100VgGcgTc11AY.46.10.001027
ORF3a100G100CGgcTgc11AY.46.50.000198
ORF3a100G100VgGcgTc11AY.470.000031
ORF3a100G100DgGcgAc11AY.50.000021
ORF3a100G100CGgcTgc11AY.5.10.003759
ORF3a100G100CGgcTgc11AY.5.30.000337
ORF3a100G100CGgcTgc11AY.500.000799
ORF3a100G100GggCggT11AY.510.000909
ORF3a100G100GggCggT11AY.520.000814
ORF3a100G100GggCggT11AY.540.000095
ORF3a100G100CGgcTgc11AY.550.000917
ORF3a100G100DgGcgAc11AY.570.000656
ORF3a100G100GggCggT11AY.590.00053
ORF3a100G100GggCggT11AY.60.000041
ORF3a100G100DgGcgAc11AY.610.000105
ORF3a100G100CGgcTgc11AY.620.000436
ORF3a100G100CGgcTgc11AY.670.000464
ORF3a100G100delGGC---11AY.680.000274
ORF3a100G100GggCggT11AY.7.10.000113
ORF3a100G100SGgcAgc11AY.7.10.000113
ORF3a100G100SGgcAgc11AY.710.000475
ORF3a100G100VgGcgTc11AY.740.000116
ORF3a100G100RGgcCgc11AY.75.10.00018
ORF3a100G100SGgcAgc11AY.780.001541
ORF3a100G100VgGcgTc11AY.790.001211
ORF3a100G100CGgcTgc11AY.850.000427
ORF3a100G100CGgcTgc11AY.860.00083
ORF3a100G100GggCggT11AY.880.000884
ORF3a100G100CGgcTgc11AY.890.004902
ORF3a100G100SGgcAgc11AY.9.20.000037
ORF3a100G100DgGcgAc11AY.9.20.000037
ORF3a100G100CGgcTgc11AY.920.000287
ORF3a100G100SGgcAgc11AY.920.000287
ORF3a100G100CGgcTgc11AY.930.000273
ORF3a100G100VgGcgTc11AY.930.000273
ORF3a100G100RGgcCgc11AY.98.10.000048
ORF3a100G100VgGcgTc11AY.98.10.000048
ORF3a100G100SGgcAgc11AY.990.001049
ORF3a100G100SGgcAgc11AY.99.20.000092
ORF3a100G100DgGcgAc11AY.99.20.000092
ORF3a100G100VgGcgTc11AZ.20.000821
ORF3a100G100CGgcTgc11AZ.50.003509
ORF3a100G100GggCggT11B0.000128
ORF3a100G100delGGC---11B0.000128
ORF3a100G100XGgCTgA11B.10.000009
ORF3a100G100AgGcgCc11B.1.10.000018
ORF3a100G100delGGC---11B.1.10.000018
ORF3a100G100CGgcTgc11B.1.1.10.000327
ORF3a100G100CGgcTgc11B.1.1.1290.009174
ORF3a100G100SGgcAgc11B.1.1.1340.011364
ORF3a100G100CGgcTgc11B.1.1.1350.004695
ORF3a100G100CGgcTgc11B.1.1.1550.071429
ORF3a100G100GggCggG11B.1.1.1610.003534
ORF3a100G100VgGcgTc11B.1.1.1630.007634
ORF3a100G100DgGcgAc11B.1.1.1640.005155
ORF3a100G100CGgcTgc11B.1.1.1710.003676
ORF3a100G100DgGcgAc11B.1.1.1720.018182
ORF3a100G100CGgcTgc11B.1.1.1760.000439
ORF3a100G100VgGcgTc11B.1.1.1890.001513
ORF3a100G100GggCggT11B.1.1.1890.001513
ORF3a100G100CGgcTgc11B.1.1.1920.002309
ORF3a100G100CGgcTgc11B.1.1.2100.005714
ORF3a100G100CGgcTgc11B.1.1.2190.005
ORF3a100G100SGgcAgc11B.1.1.2220.000204
ORF3a100G100GggCggT11B.1.1.250.000569
ORF3a100G100CGgcTgc11B.1.1.2650.003155
ORF3a100G100CGgcTgc11B.1.1.2770.000759
ORF3a100G100GggCggT11B.1.1.280.000311
ORF3a100G100SGgcAgc11B.1.1.280.000311
ORF3a100G100GggCggA11B.1.1.3040.002809
ORF3a100G100DgGcgAc11B.1.1.3110.000358
ORF3a100G100delGGC---11B.1.1.3150.008475
ORF3a100G100DgGcgAc11B.1.1.3170.000412
ORF3a100G100CGgcTgc11B.1.1.3220.008772
ORF3a100G100GggCggG11B.1.1.3260.001761
ORF3a100G100CGgcTgc11B.1.1.3290.003846
ORF3a100G100RGgCAgA11B.1.1.330.000421
ORF3a100G100GggCggA11B.1.1.330.000421
ORF3a100G100KGGCAAA11B.1.1.330.000421
ORF3a100G100NGGcAAc11B.1.1.330.000421
ORF3a100G100EgGCgAA11B.1.1.330.000421
ORF3a100G100DgGcgAc11B.1.1.330.000421
ORF3a100G100SGgcAgc11B.1.1.3340.016393
ORF3a100G100CGgcTgc11B.1.1.3370.003597
ORF3a100G100SGgcAgc11B.1.1.3480.000796
ORF3a100G100VgGcgTc11B.1.1.3610.045455
ORF3a100G100CGgcTgc11B.1.1.3650.005587
ORF3a100G100CGgcTgc11B.1.1.3680.003086
ORF3a100G100CGgcTgc11B.1.1.370.000193
ORF3a100G100GggCggT11B.1.1.3760.005952
ORF3a100G100CGgcTgc11B.1.1.3800.009804
ORF3a100G100CGgcTgc11B.1.1.3880.045455
ORF3a100G100CGgcTgc11B.1.1.3890.006061
ORF3a100G100SGgcAgc11B.1.1.390.00051
ORF3a100G100CGgcTgc11B.1.1.3970.002252
ORF3a100G100delGGC---11B.1.1.4090.002833
ORF3a100G100delGGC---11B.1.1.4200.001006
ORF3a100G100SGgcAgc11B.1.1.4250.045455
ORF3a100G100GggCggT11B.1.1.4320.001266
ORF3a100G100GggCggA11B.1.1.4340.000349
ORF3a100G100CGgcTgc11B.1.1.4420.018519
ORF3a100G100CGgcTgc11B.1.1.4850.016667
ORF3a100G100CGgcTgc11B.1.1.510.001718
ORF3a100G100DgGcgAc11B.1.1.5190.00004
ORF3a100G100CGgcTgc11B.1.1.5210.005348
ORF3a100G100CGgcTgc11B.1.1.5230.001563
ORF3a100G100CGgcTgc11B.1.1.5250.005464
ORF3a100G100SGgcAgc11B.1.1.630.000386
ORF3a100G100KGGCAAA11B.1.1.70.000001
ORF3a100G100VgGcgTc11B.1.1040.00369
ORF3a100G100DgGcgAc11B.1.1050.009615
ORF3a100G100DgGcgAc11B.1.1110.001175
ORF3a100G100CGgcTgc11B.1.1390.000733
ORF3a100G100delGGC---11B.1.1400.018868
ORF3a100G100delGGC---11B.1.1570.002985
ORF3a100G100delGGC---11B.1.1600.000031
ORF3a100G100CGgcTgc11B.1.160.160.000929
ORF3a100G100delGGC---11B.1.160.230.004831
ORF3a100G100CGgcTgc11B.1.1700.00431
ORF3a100G100DgGcgAc11B.1.1770.000013
ORF3a100G100GggCggT11B.1.177.140.006098
ORF3a100G100AgGcgCc11B.1.177.200.001517
ORF3a100G100CGgcTgc11B.1.177.210.000076
ORF3a100G100CGgcTgc11B.1.177.350.000691
ORF3a100G100RGgcCgc11B.1.177.40.000211
ORF3a100G100GggCggT11B.1.177.440.000519
ORF3a100G100CGgcTgc11B.1.177.440.000519
ORF3a100G100delGGC---11B.1.177.510.004566
ORF3a100G100CGgcTgc11B.1.177.510.004566
ORF3a100G100GggCggT11B.1.177.560.000668
ORF3a100G100CGgcTgc11B.1.177.560.000668
ORF3a100G100CGgcTgc11B.1.177.570.000281
ORF3a100G100delGGC---11B.1.177.60.000977
ORF3a100G100DgGcgAc11B.1.177.60.000977
ORF3a100G100SGgcAgc11B.1.177.620.001192
ORF3a100G100delGGC---11B.1.177.620.001192
ORF3a100G100CGgcTgc11B.1.177.630.002703
ORF3a100G100SGgcAgc11B.1.177.70.000165
ORF3a100G100CGgcTgc11B.1.177.730.000566
ORF3a100G100RGgcCgc11B.1.177.730.000566
ORF3a100G100delGGC---11B.1.20.000009
ORF3a100G100GggCggT11B.1.2060.000816
ORF3a100G100GggCggT11B.1.2100.002132
ORF3a100G100CGgcTgc11B.1.2120.016667
ORF3a100G100VgGcgTc11B.1.2140.003663
ORF3a100G100VgGcgTc11B.1.220.001318
ORF3a100G100SGgcAgc11B.1.2210.000071
ORF3a100G100RGgcCgc11B.1.2210.000071
ORF3a100G100AgGcgCc11B.1.2340.000132
ORF3a100G100CGgcTgc11B.1.2390.001221
ORF3a100G100GggCggT11B.1.2400.000216
ORF3a100G100DgGcgAc11B.1.2580.000067
ORF3a100G100VgGcgTc11B.1.2580.000067
ORF3a100G100CGgcTgc11B.1.2640.012346
ORF3a100G100DgGcgAc11B.1.2790.000514
ORF3a100G100GggCggT11B.1.2980.002114
ORF3a100G100CGgcTgc11B.1.3010.005917
ORF3a100G100RGgcCgc11B.1.3110.000275
ORF3a100G100DgGcgAc11B.1.3510.00003
ORF3a100G100CGgcTgc11B.1.351.30.000876
ORF3a100G100CGgcTgc11B.1.351.50.0006
ORF3a100G100CGgcTgc11B.1.36.120.009615
ORF3a100G100GggCggT11B.1.36.210.00216
ORF3a100G100CGgcTgc11B.1.36.220.001208
ORF3a100G100CGgcTgc11B.1.36.270.000763
ORF3a100G100SGgcAgc11B.1.36.290.000517
ORF3a100G100GggCggT11B.1.36.290.000517
ORF3a100G100CGgcTgc11B.1.36.360.000602
ORF3a100G100CGgcTgc11B.1.36.380.001642
ORF3a100G100SGgcAgc11B.1.36.80.001
ORF3a100G100delGGC---11B.1.3620.001541
ORF3a100G100CGgcTgc11B.1.362.20.004717
ORF3a100G100SGGcTCc11B.1.362.20.004717
ORF3a100G100SGgcAgc11B.1.3670.000792
ORF3a100G100DgGcgAc11B.1.3810.007812
ORF3a100G100GggCggT11B.1.3960.000706
ORF3a100G100GggCggT11B.1.4160.001269
ORF3a100G100delGGC---11B.1.416.10.001563
ORF3a100G100CGgcTgc11B.1.4280.00102
ORF3a100G100CGgcTgc11B.1.4390.005917
ORF3a100G100CGgcTgc11B.1.4530.003236
ORF3a100G100DgGcgAc11B.1.4560.003268
ORF3a100G100CGgcTgc11B.1.4560.003268
ORF3a100G100SGgcAgc11B.1.4680.005714
ORF3a100G100VgGcgTc11B.1.4680.005714
ORF3a100G100GggCggT11B.1.4690.00361
ORF3a100G100CGgcTgc11B.1.4700.001404
ORF3a100G100CGgcTgc11B.1.4710.002732
ORF3a100G100CGgcTgc11B.1.4970.000315
ORF3a100G100CGgcTgc11B.1.5010.007353
ORF3a100G100CGgcTgc11B.1.5170.000427
ORF3a100G100VgGcgTc11B.1.5230.002451
ORF3a100G100GggCggT11B.1.5250.000113
ORF3a100G100AgGcgCc11B.1.5260.000024
ORF3a100G100CGgcTgc11B.1.5270.003704
ORF3a100G100CGgcTgc11B.1.5400.009709
ORF3a100G100AgGcgCc11B.1.5440.006024
ORF3a100G100VgGcgTc11B.1.5540.004405
ORF3a100G100CGgcTgc11B.1.5560.007519
ORF3a100G100VgGcgTc11B.1.5600.00463
ORF3a100G100CGgcTgc11B.1.5670.003333
ORF3a100G100CGgcTgc11B.1.5700.002941
ORF3a100G100GggCggT11B.1.5750.000303
ORF3a100G100CGgcTgc11B.1.5770.000687
ORF3a100G100delGGC---11B.1.5960.000087
ORF3a100G100VgGcgTc11B.1.5960.000087
ORF3a100G100DgGcgAc11B.1.5960.000087
ORF3a100G100CGgcTgc11B.1.5990.00365
ORF3a100G100DgGcgAc11B.1.6090.000479
ORF3a100G100VgGcgTc11B.1.6090.000479
ORF3a100G100delGGC---11B.1.617.10.000129
ORF3a100G100VgGcgTc11B.1.617.10.000129
ORF3a100G100RGgcCgc11B.1.617.10.000129
ORF3a100G100RGgcCgc11B.1.617.20.000004
ORF3a100G100CGgcTgc11B.1.617.30.002985
ORF3a100G100CGgcTgc11B.1.6190.000871
ORF3a100G100SGgcAgc11B.1.6210.000089
ORF3a100G100RGgcCgc11B.1.6210.000089
ORF3a100G100delGGC---11B.1.6380.052632
ORF3a100G100CGgcTgc11B.1.910.002075
ORF3a100G100HGGcCAc11B.1.910.002075
ORF3a100G100NGGcAAc11B.1.910.002075
ORF3a100G100GggCggA11B.1.910.002075
ORF3a100G100YGGcTAc11B.1.910.002075
ORF3a100G100KGGCAAA11B.1.910.002075
ORF3a100G100SGgcAgc11B.1.910.002075
ORF3a100G100QGGCCAA11B.1.910.002075
ORF3a100G100SGgcAgc11B.1.930.000934
ORF3a100G100VgGcgTc11B.280.003279
ORF3a100G100XGgCTgA11B.310.003731
ORF3a100G100CGgcTgc11B.400.000364
ORF3a100G100VgGcgTc11B.60.00091
ORF3a100G100GggCggT11B.6.60.000889
ORF3a100G100GggCggT11C.260.007353
ORF3a100G100CGgcTgc11C.260.007353
ORF3a100G100GggCggT11C.30.10.006711
ORF3a100G100SGgcAgc11C.360.000911
ORF3a100G100SGgcAgc11C.370.000116
ORF3a100G100delGGC---11C.370.000116
ORF3a100G100DgGcgAc11C.370.000116
ORF3a100G100VgGcgTc11C.370.000116
ORF3a100G100CGgcTgc11L.30.003546
ORF3a100G100GggCggT11N.30.005814
ORF3a100G100DgGcgAc11N.50.001767
ORF3a100G100DgGcgAc11P.10.000016
ORF3a100G100CGgcTgc11P.1.120.000484
ORF3a100G100RGgcCgc11P.1.140.000048
ORF3a100G100VgGcgTc11P.20.000187
ORF3a100G100DgGcgAc11Q.10.000126
ORF3a100G100CGgcTgc11Q.40.000455
ORF3a100G100delGGC---11Q.40.000455
ORF3a100G100GggCggT11Q.60.006623
ORF3a100G100SGgcAgc11Q.80.000165
ORF3a100G100delGGC---11U.30.003861