CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = Y87del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp987Y87del1Y4227del1deltaTta-15120.812944-12946
ORF1ab/nsp987Y87del1Y4227del1delTaT-aG1520.13333312944-12946
ORF1ab/nsp987Y87del1Y4227del1deltAtt-t1510.066666712944-12946

Details of the mutation Y87del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp987Y87del1taTta-1215All0.000002
ORF1ab/nsp987Y87del1TaT-aG215All0
ORF1ab/nsp987Y87del1tAtt-t115All0
ORF1ab/nsp987Y87del1taTta-77AY.160.002658
ORF1ab/nsp987Y87del1taTta-22B.1.617.20.000008
ORF1ab/nsp987Y87del1taTta-11AY.4.50.000107
ORF1ab/nsp987Y87del1TaT-aG11AY.670.000464
ORF1ab/nsp987Y87del1taTta-11B.10.000009
ORF1ab/nsp987Y87del1TaT-aG11B.1.1.70.000001
ORF1ab/nsp987Y87del1tAtt-t11B.1.20.000009
ORF1ab/nsp987Y87del1taTta-11B.1.2580.000067