CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = Y66S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp966Y66SY4206SnonsyntAttCt980.88888912881-12883
ORF1ab/nsp966Y66SY4206SnonsynTAtAGt910.11111112881-12883

Details of the mutation Y66S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp966Y66StAttCt89All0.000002
ORF1ab/nsp966Y66STAtAGt19All0
ORF1ab/nsp966Y66StAttCt33B.1.1.70.000003
ORF1ab/nsp966Y66StAttCt22B.1.5250.000226
ORF1ab/nsp966Y66STAtAGt11AY.1030.000006
ORF1ab/nsp966Y66StAttCt11AY.40.000002
ORF1ab/nsp966Y66StAttCt11AY.850.000427
ORF1ab/nsp966Y66StAttCt11B.1.1390.000733