CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = T77A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp977T77AT4217AnonsynAcaGca4444112914-12916

Details of the mutation T77A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp977T77AAcaGca4444All0.000008
ORF1ab/nsp977T77AAcaGca1111B.1.1.70.00001
ORF1ab/nsp977T77AAcaGca77AY.950.005327
ORF1ab/nsp977T77AAcaGca55AY.40.000008
ORF1ab/nsp977T77AAcaGca33AY.250.000018
ORF1ab/nsp977T77AAcaGca33B.1.617.20.000011
ORF1ab/nsp977T77AAcaGca33P.20.00056
ORF1ab/nsp977T77AAcaGca22AY.1020.000053
ORF1ab/nsp977T77AAcaGca22AY.1030.000012
ORF1ab/nsp977T77AAcaGca22AY.440.000012
ORF1ab/nsp977T77AAcaGca11AY.1200.000037
ORF1ab/nsp977T77AAcaGca11AY.390.000025
ORF1ab/nsp977T77AAcaGca11AY.430.000004
ORF1ab/nsp977T77AAcaGca11AY.790.001211
ORF1ab/nsp977T77AAcaGca11B.10.000009
ORF1ab/nsp977T77AAcaGca11B.1.2580.000067