CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = T21T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp921T21TT4161TsynacTacC148110910.73666412746-12748
ORF1ab/nsp921T21TT4161TsynacTacA14813650.24645512746-12748
ORF1ab/nsp921T21TT4161TsynacTacG1481250.016880512746-12748

Details of the mutation T21T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp921T21TacTacC10911481All0.000209
ORF1ab/nsp921T21TacTacA3651481All0.00007
ORF1ab/nsp921T21TacTacG251481All0.000005
ORF1ab/nsp921T21TacTacC531800B.1.1.70.000475
ORF1ab/nsp921T21TacTacA258800B.1.1.70.000231
ORF1ab/nsp921T21TacTacG11800B.1.1.70.00001
ORF1ab/nsp921T21TacTacC326326AW.10.993902
ORF1ab/nsp921T21TacTacC5454B.1.177.120.008192
ORF1ab/nsp921T21TacTacA4040AY.660.042781
ORF1ab/nsp921T21TacTacC3939AY.1020.001034
ORF1ab/nsp921T21TacTacC1616B.1.5750.004854
ORF1ab/nsp921T21TacTacC1414AY.260.000396
ORF1ab/nsp921T21TacTacA1314B.1.10.000236
ORF1ab/nsp921T21TacTacC114B.1.10.000018
ORF1ab/nsp921T21TacTacA1414B.1.3510.000416
ORF1ab/nsp921T21TacTacC1113AY.440.000067
ORF1ab/nsp921T21TacTacG113AY.440.000006
ORF1ab/nsp921T21TacTacA113AY.440.000006
ORF1ab/nsp921T21TacTacC1112AY.430.000049
ORF1ab/nsp921T21TacTacG112AY.430.000004
ORF1ab/nsp921T21TacTacC812B.10.000073
ORF1ab/nsp921T21TacTacA412B.10.000037
ORF1ab/nsp921T21TacTacC811B.1.617.20.00003
ORF1ab/nsp921T21TacTacA211B.1.617.20.000008
ORF1ab/nsp921T21TacTacG111B.1.617.20.000004
ORF1ab/nsp921T21TacTacC48AY.40.000006
ORF1ab/nsp921T21TacTacA38AY.40.000005
ORF1ab/nsp921T21TacTacG18AY.40.000002
ORF1ab/nsp921T21TacTacC77B.1.36.290.003621
ORF1ab/nsp921T21TacTacA56AY.1200.000186
ORF1ab/nsp921T21TacTacC16AY.1200.000037
ORF1ab/nsp921T21TacTacC66AY.30.00006
ORF1ab/nsp921T21TacTacC56B.1.20.000044
ORF1ab/nsp921T21TacTacA16B.1.20.000009
ORF1ab/nsp921T21TacTacG56P.10.000079
ORF1ab/nsp921T21TacTacA16P.10.000016
ORF1ab/nsp921T21TacTacC44AY.950.003044
ORF1ab/nsp921T21TacTacA44B.1.1.2840.00043
ORF1ab/nsp921T21TacTacC44B.1.160.120.025641
ORF1ab/nsp921T21TacTacC33AY.290.000047
ORF1ab/nsp921T21TacTacG13AY.390.000025
ORF1ab/nsp921T21TacTacA13AY.390.000025
ORF1ab/nsp921T21TacTacC13AY.390.000025
ORF1ab/nsp921T21TacTacG33AY.4.40.001227
ORF1ab/nsp921T21TacTacA23B.1.2580.000133
ORF1ab/nsp921T21TacTacG13B.1.2580.000067
ORF1ab/nsp921T21TacTacC33B.1.4290.000071
ORF1ab/nsp921T21TacTacA23B.1.5260.000047
ORF1ab/nsp921T21TacTacC13B.1.5260.000024
ORF1ab/nsp921T21TacTacC22AY.100.00106
ORF1ab/nsp921T21TacTacC22AY.1110.000366
ORF1ab/nsp921T21TacTacC12AY.250.000006
ORF1ab/nsp921T21TacTacA12AY.250.000006
ORF1ab/nsp921T21TacTacC22AY.60.000082
ORF1ab/nsp921T21TacTacC22AY.9.20.000073
ORF1ab/nsp921T21TacTacC22B.1.1.3760.011905
ORF1ab/nsp921T21TacTacC22B.1.1600.000062
ORF1ab/nsp921T21TacTacA12B.1.1770.000013
ORF1ab/nsp921T21TacTacC12B.1.1770.000013
ORF1ab/nsp921T21TacTacC22B.1.177.440.001038
ORF1ab/nsp921T21TacTacC22B.1.360.000292
ORF1ab/nsp921T21TacTacA22B.1.6210.000177
ORF1ab/nsp921T21TacTacC22B.1.6360.013423
ORF1ab/nsp921T21TacTacA22C.370.000232
ORF1ab/nsp921T21TacTacC11AL.10.012987
ORF1ab/nsp921T21TacTacA11AY.1000.000046
ORF1ab/nsp921T21TacTacC11AY.1130.000142
ORF1ab/nsp921T21TacTacC11AY.1190.000035
ORF1ab/nsp921T21TacTacA11AY.120.10.000321
ORF1ab/nsp921T21TacTacC11AY.140.000088
ORF1ab/nsp921T21TacTacC11AY.46.40.000165
ORF1ab/nsp921T21TacTacC11AY.470.000031
ORF1ab/nsp921T21TacTacC11AY.670.000464
ORF1ab/nsp921T21TacTacA11AY.7.20.000559
ORF1ab/nsp921T21TacTacC11AY.750.000056
ORF1ab/nsp921T21TacTacA11B.1.1.3350.012987
ORF1ab/nsp921T21TacTacC11B.1.1.4640.001473
ORF1ab/nsp921T21TacTacC11B.1.1.5190.00004
ORF1ab/nsp921T21TacTacC11B.1.1.80.003584
ORF1ab/nsp921T21TacTacC11B.1.177.430.001477
ORF1ab/nsp921T21TacTacC11B.1.2100.002132
ORF1ab/nsp921T21TacTacA11B.6.60.000889
ORF1ab/nsp921T21TacTacA11P.1.140.000048
ORF1ab/nsp921T21TacTacA11Q.30.000145
ORF1ab/nsp921T21TacTacA11Q.40.000455