CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = T109I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp9109T109IT4249InonsynaCaaTa84928492113010-13012

Details of the mutation T109I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp9109T109IaCaaTa84928492All0.001624
ORF1ab/nsp9109T109IaCaaTa21662166B.1.1.70.001939
ORF1ab/nsp9109T109IaCaaTa13391339AY.40.002084
ORF1ab/nsp9109T109IaCaaTa695695B.1.617.20.002617
ORF1ab/nsp9109T109IaCaaTa550550AY.250.003308
ORF1ab/nsp9109T109IaCaaTa204204AY.440.001242
ORF1ab/nsp9109T109IaCaaTa200200AY.430.000886
ORF1ab/nsp9109T109IaCaaTa182182AY.260.005152
ORF1ab/nsp9109T109IaCaaTa174174AY.1030.00108
ORF1ab/nsp9109T109IaCaaTa171171B.1.6260.977143
ORF1ab/nsp9109T109IaCaaTa170170AY.30.001691
ORF1ab/nsp9109T109IaCaaTa156156B.1.1770.002054
ORF1ab/nsp9109T109IaCaaTa9999B.1.5260.002327
ORF1ab/nsp9109T109IaCaaTa9090AY.1020.002386
ORF1ab/nsp9109T109IaCaaTa8484AY.590.044492
ORF1ab/nsp9109T109IaCaaTa8282B.10.000751
ORF1ab/nsp9109T109IaCaaTa8181B.1.20.000713
ORF1ab/nsp9109T109IaCaaTa8080AY.290.001262
ORF1ab/nsp9109T109IaCaaTa7373AY.50.001507
ORF1ab/nsp9109T109IaCaaTa6767AY.1180.004197
ORF1ab/nsp9109T109IaCaaTa6060B.1.177.750.062435
ORF1ab/nsp9109T109IaCaaTa5656AY.980.004424
ORF1ab/nsp9109T109IaCaaTa5454AY.1100.006085
ORF1ab/nsp9109T109IaCaaTa4949B.1.10.000889
ORF1ab/nsp9109T109IaCaaTa4545B.1.4600.803571
ORF1ab/nsp9109T109IaCaaTa4444B.1.4290.001035
ORF1ab/nsp9109T109IaCaaTa4343AY.1000.001978
ORF1ab/nsp9109T109IaCaaTa4141AY.130.0066
ORF1ab/nsp9109T109IaCaaTa4141AY.390.001013
ORF1ab/nsp9109T109IaCaaTa3939AY.1130.005553
ORF1ab/nsp9109T109IaCaaTa3838AY.1190.001342
ORF1ab/nsp9109T109IaCaaTa3737AY.200.001438
ORF1ab/nsp9109T109IaCaaTa3434B.1.3510.001011
ORF1ab/nsp9109T109IaCaaTa3333B.1.177.60.032227
ORF1ab/nsp9109T109IaCaaTa3232B.1.960.603774
ORF1ab/nsp9109T109IaCaaTa3131AY.520.025244
ORF1ab/nsp9109T109IaCaaTa2929AY.9.20.001065
ORF1ab/nsp9109T109IaCaaTa2828B.1.177.440.01453
ORF1ab/nsp9109T109IaCaaTa2727AY.3.10.002302
ORF1ab/nsp9109T109IaCaaTa2727AY.4.50.002902
ORF1ab/nsp9109T109IaCaaTa2727AY.920.007756
ORF1ab/nsp9109T109IaCaaTa2626AY.750.001457
ORF1ab/nsp9109T109IaCaaTa2626B.1.36.160.037037
ORF1ab/nsp9109T109IaCaaTa2424AY.46.60.001733
ORF1ab/nsp9109T109IaCaaTa2424AY.90.001622
ORF1ab/nsp9109T109IaCaaTa2121AY.420.000845
ORF1ab/nsp9109T109IaCaaTa2020D.20.001501
ORF1ab/nsp9109T109IaCaaTa1919AY.1080.020948
ORF1ab/nsp9109T109IaCaaTa1919AY.4.20.000412
ORF1ab/nsp9109T109IaCaaTa1919B.1.4270.000959
ORF1ab/nsp9109T109IaCaaTa1818AY.1010.008828
ORF1ab/nsp9109T109IaCaaTa1818AY.540.001716
ORF1ab/nsp9109T109IaCaaTa1818B.1.1.1410.036217
ORF1ab/nsp9109T109IaCaaTa1818P.10.000284
ORF1ab/nsp9109T109IaCaaTa1717B.1.1.5190.000675
ORF1ab/nsp9109T109IaCaaTa1616AY.1170.001352
ORF1ab/nsp9109T109IaCaaTa1616AY.230.001116
ORF1ab/nsp9109T109IaCaaTa1616AY.98.10.000775
ORF1ab/nsp9109T109IaCaaTa1515AY.1200.000558
ORF1ab/nsp9109T109IaCaaTa1515AY.450.001825
ORF1ab/nsp9109T109IaCaaTa1515AY.75.10.002705
ORF1ab/nsp9109T109IaCaaTa1414AY.470.000435
ORF1ab/nsp9109T109IaCaaTa1414AY.5.30.004723
ORF1ab/nsp9109T109IaCaaTa1414AY.60.000576
ORF1ab/nsp9109T109IaCaaTa1414AY.840.006124
ORF1ab/nsp9109T109IaCaaTa1212AY.1210.001624
ORF1ab/nsp9109T109IaCaaTa1212AY.690.00224
ORF1ab/nsp9109T109IaCaaTa1212B.1.2270.571429
ORF1ab/nsp9109T109IaCaaTa1111AY.610.001153
ORF1ab/nsp9109T109IaCaaTa1111AY.850.004699
ORF1ab/nsp9109T109IaCaaTa1111B.1.2340.001451
ORF1ab/nsp9109T109IaCaaTa1111P.1.70.003512
ORF1ab/nsp9109T109IaCaaTa1010AY.99.20.000922
ORF1ab/nsp9109T109IaCaaTa1010B.1.177.570.00281
ORF1ab/nsp9109T109IaCaaTa1010B.1.2430.000696
ORF1ab/nsp9109T109IaCaaTa1010Q.10.001263
ORF1ab/nsp9109T109IaCaaTa99B0.00115
ORF1ab/nsp9109T109IaCaaTa99B.1.1.2220.001836
ORF1ab/nsp9109T109IaCaaTa99B.1.5960.000784
ORF1ab/nsp9109T109IaCaaTa88AY.340.000776
ORF1ab/nsp9109T109IaCaaTa88AY.39.10.000317
ORF1ab/nsp9109T109IaCaaTa88AY.700.001668
ORF1ab/nsp9109T109IaCaaTa88B.1.1490.027397
ORF1ab/nsp9109T109IaCaaTa77AY.900.004791
ORF1ab/nsp9109T109IaCaaTa77B.1.617.10.000903
ORF1ab/nsp9109T109IaCaaTa66AY.460.000624
ORF1ab/nsp9109T109IaCaaTa66AY.930.001638
ORF1ab/nsp9109T109IaCaaTa66AY.990.006296
ORF1ab/nsp9109T109IaCaaTa66B.1.1.2140.000333
ORF1ab/nsp9109T109IaCaaTa66B.1.1.370.001157
ORF1ab/nsp9109T109IaCaaTa66B.1.1.4270.857143
ORF1ab/nsp9109T109IaCaaTa66B.1.4970.001889
ORF1ab/nsp9109T109IaCaaTa66B.1.5750.00182
ORF1ab/nsp9109T109IaCaaTa66B.1.6250.014118
ORF1ab/nsp9109T109IaCaaTa66P.20.00112
ORF1ab/nsp9109T109IaCaaTa55AY.1160.001434
ORF1ab/nsp9109T109IaCaaTa55AY.630.001934
ORF1ab/nsp9109T109IaCaaTa55AY.730.003327
ORF1ab/nsp9109T109IaCaaTa55AY.740.000578
ORF1ab/nsp9109T109IaCaaTa55B.1.1600.000156
ORF1ab/nsp9109T109IaCaaTa44AY.160.001519
ORF1ab/nsp9109T109IaCaaTa44AY.270.000259
ORF1ab/nsp9109T109IaCaaTa44AY.330.000267
ORF1ab/nsp9109T109IaCaaTa44AY.34.10.00204
ORF1ab/nsp9109T109IaCaaTa44AY.4.2.10.000596
ORF1ab/nsp9109T109IaCaaTa44AY.46.50.000794
ORF1ab/nsp9109T109IaCaaTa44AY.550.00367
ORF1ab/nsp9109T109IaCaaTa44AY.790.004843
ORF1ab/nsp9109T109IaCaaTa44AY.9.10.000335
ORF1ab/nsp9109T109IaCaaTa44B.1.1.1800.043011
ORF1ab/nsp9109T109IaCaaTa44B.1.177.40.000844
ORF1ab/nsp9109T109IaCaaTa44B.1.177.560.00267
ORF1ab/nsp9109T109IaCaaTa44B.1.177.860.000734
ORF1ab/nsp9109T109IaCaaTa44B.1.2210.000284
ORF1ab/nsp9109T109IaCaaTa44B.1.5250.000453
ORF1ab/nsp9109T109IaCaaTa44B.1.5950.001044
ORF1ab/nsp9109T109IaCaaTa44B.1.621.10.002023
ORF1ab/nsp9109T109IaCaaTa44Q.80.00066
ORF1ab/nsp9109T109IaCaaTa33AD.20.000657
ORF1ab/nsp9109T109IaCaaTa33AY.100.00159
ORF1ab/nsp9109T109IaCaaTa33AY.140.000264
ORF1ab/nsp9109T109IaCaaTa33AY.360.000445
ORF1ab/nsp9109T109IaCaaTa33AY.4.10.002212
ORF1ab/nsp9109T109IaCaaTa33AY.46.40.000494
ORF1ab/nsp9109T109IaCaaTa33AY.620.001307
ORF1ab/nsp9109T109IaCaaTa33AY.680.000821
ORF1ab/nsp9109T109IaCaaTa33AY.70.000588
ORF1ab/nsp9109T109IaCaaTa33AY.7.20.001678
ORF1ab/nsp9109T109IaCaaTa33B.1.1.280.000934
ORF1ab/nsp9109T109IaCaaTa33B.1.1.330.001263
ORF1ab/nsp9109T109IaCaaTa33B.1.1.4160.002715
ORF1ab/nsp9109T109IaCaaTa33B.1.1.480.008621
ORF1ab/nsp9109T109IaCaaTa33B.1.1260.003827
ORF1ab/nsp9109T109IaCaaTa33B.1.177.210.000229
ORF1ab/nsp9109T109IaCaaTa33B.1.2400.000647
ORF1ab/nsp9109T109IaCaaTa33B.1.2580.0002
ORF1ab/nsp9109T109IaCaaTa33B.1.3610.003866
ORF1ab/nsp9109T109IaCaaTa33B.1.4700.004213
ORF1ab/nsp9109T109IaCaaTa33B.1.6210.000266
ORF1ab/nsp9109T109IaCaaTa33P.1.140.000143
ORF1ab/nsp9109T109IaCaaTa22A.2.50.000998
ORF1ab/nsp9109T109IaCaaTa22AN.10.04
ORF1ab/nsp9109T109IaCaaTa22AY.1090.001479
ORF1ab/nsp9109T109IaCaaTa22AY.1140.000462
ORF1ab/nsp9109T109IaCaaTa22AY.16.10.00094
ORF1ab/nsp9109T109IaCaaTa22AY.650.001066
ORF1ab/nsp9109T109IaCaaTa22AY.7.10.000225
ORF1ab/nsp9109T109IaCaaTa22AY.860.00166
ORF1ab/nsp9109T109IaCaaTa22AY.880.001768
ORF1ab/nsp9109T109IaCaaTa22AY.950.001522
ORF1ab/nsp9109T109IaCaaTa22B.1.1.3980.006452
ORF1ab/nsp9109T109IaCaaTa22B.1.1.4480.004065
ORF1ab/nsp9109T109IaCaaTa22B.1.1.5250.010929
ORF1ab/nsp9109T109IaCaaTa22B.1.110.30.001437
ORF1ab/nsp9109T109IaCaaTa22B.1.1280.001271
ORF1ab/nsp9109T109IaCaaTa22B.1.1390.001466
ORF1ab/nsp9109T109IaCaaTa22B.1.1620.01005
ORF1ab/nsp9109T109IaCaaTa22B.1.258.170.000208
ORF1ab/nsp9109T109IaCaaTa22B.1.2790.001027
ORF1ab/nsp9109T109IaCaaTa22B.1.3110.000549
ORF1ab/nsp9109T109IaCaaTa22B.1.360.000292
ORF1ab/nsp9109T109IaCaaTa22B.1.4370.041667
ORF1ab/nsp9109T109IaCaaTa22B.1.438.10.000215
ORF1ab/nsp9109T109IaCaaTa22B.1.4800.004975
ORF1ab/nsp9109T109IaCaaTa22B.1.5700.005882
ORF1ab/nsp9109T109IaCaaTa22B.1.6280.000705
ORF1ab/nsp9109T109IaCaaTa22B.1.6370.000146
ORF1ab/nsp9109T109IaCaaTa22B.460.041667
ORF1ab/nsp9109T109IaCaaTa22C.370.000232
ORF1ab/nsp9109T109IaCaaTa22P.1.150.000465
ORF1ab/nsp9109T109IaCaaTa22P.1.160.000748
ORF1ab/nsp9109T109IaCaaTa22W.40.002703
ORF1ab/nsp9109T109IaCaaTa11A0.000387
ORF1ab/nsp9109T109IaCaaTa11A.30.002096
ORF1ab/nsp9109T109IaCaaTa11AA.70.009174
ORF1ab/nsp9109T109IaCaaTa11AK.10.012658
ORF1ab/nsp9109T109IaCaaTa11AU.20.002421
ORF1ab/nsp9109T109IaCaaTa11AY.1070.000466
ORF1ab/nsp9109T109IaCaaTa11AY.1110.000183
ORF1ab/nsp9109T109IaCaaTa11AY.120.10.000321
ORF1ab/nsp9109T109IaCaaTa11AY.190.00114
ORF1ab/nsp9109T109IaCaaTa11AY.23.10.000417
ORF1ab/nsp9109T109IaCaaTa11AY.240.000431
ORF1ab/nsp9109T109IaCaaTa11AY.29.10.000221
ORF1ab/nsp9109T109IaCaaTa11AY.320.000532
ORF1ab/nsp9109T109IaCaaTa11AY.370.000316
ORF1ab/nsp9109T109IaCaaTa11AY.380.000499
ORF1ab/nsp9109T109IaCaaTa11AY.39.20.001541
ORF1ab/nsp9109T109IaCaaTa11AY.400.000964
ORF1ab/nsp9109T109IaCaaTa11AY.410.000294
ORF1ab/nsp9109T109IaCaaTa11AY.560.001605
ORF1ab/nsp9109T109IaCaaTa11AY.770.001127
ORF1ab/nsp9109T109IaCaaTa11AY.80.000606
ORF1ab/nsp9109T109IaCaaTa11AY.820.001357
ORF1ab/nsp9109T109IaCaaTa11AY.940.000443
ORF1ab/nsp9109T109IaCaaTa11AY.960.002075
ORF1ab/nsp9109T109IaCaaTa11B.1.1.1210.002427
ORF1ab/nsp9109T109IaCaaTa11B.1.1.1760.000439
ORF1ab/nsp9109T109IaCaaTa11B.1.1.2000.007463
ORF1ab/nsp9109T109IaCaaTa11B.1.1.2070.001182
ORF1ab/nsp9109T109IaCaaTa11B.1.1.2770.000759
ORF1ab/nsp9109T109IaCaaTa11B.1.1.2940.001266
ORF1ab/nsp9109T109IaCaaTa11B.1.1.3060.000438
ORF1ab/nsp9109T109IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp9109T109IaCaaTa11B.1.1.3590.027778
ORF1ab/nsp9109T109IaCaaTa11B.1.1.3690.000446
ORF1ab/nsp9109T109IaCaaTa11B.1.1.3780.007299
ORF1ab/nsp9109T109IaCaaTa11B.1.1.390.00051
ORF1ab/nsp9109T109IaCaaTa11B.1.1.4090.002833
ORF1ab/nsp9109T109IaCaaTa11B.1.1.410.006329
ORF1ab/nsp9109T109IaCaaTa11B.1.1.4290.004608
ORF1ab/nsp9109T109IaCaaTa11B.1.1.4320.001266
ORF1ab/nsp9109T109IaCaaTa11B.1.1.5230.001563
ORF1ab/nsp9109T109IaCaaTa11B.1.1.700.000341
ORF1ab/nsp9109T109IaCaaTa11B.1.160.280.002924
ORF1ab/nsp9109T109IaCaaTa11B.1.160.300.002976
ORF1ab/nsp9109T109IaCaaTa11B.1.177.150.000631
ORF1ab/nsp9109T109IaCaaTa11B.1.177.160.000664
ORF1ab/nsp9109T109IaCaaTa11B.1.177.240.001295
ORF1ab/nsp9109T109IaCaaTa11B.1.177.320.00135
ORF1ab/nsp9109T109IaCaaTa11B.1.177.330.001645
ORF1ab/nsp9109T109IaCaaTa11B.1.177.410.0025
ORF1ab/nsp9109T109IaCaaTa11B.1.177.810.000189
ORF1ab/nsp9109T109IaCaaTa11B.1.1890.004292
ORF1ab/nsp9109T109IaCaaTa11B.1.2060.000816
ORF1ab/nsp9109T109IaCaaTa11B.1.221.30.000833
ORF1ab/nsp9109T109IaCaaTa11B.1.230.006061
ORF1ab/nsp9109T109IaCaaTa11B.1.2320.000537
ORF1ab/nsp9109T109IaCaaTa11B.1.2450.03125
ORF1ab/nsp9109T109IaCaaTa11B.1.258.140.00098
ORF1ab/nsp9109T109IaCaaTa11B.1.2740.011905
ORF1ab/nsp9109T109IaCaaTa11B.1.3350.010309
ORF1ab/nsp9109T109IaCaaTa11B.1.3380.008621
ORF1ab/nsp9109T109IaCaaTa11B.1.3410.022727
ORF1ab/nsp9109T109IaCaaTa11B.1.3460.001311
ORF1ab/nsp9109T109IaCaaTa11B.1.351.20.000303
ORF1ab/nsp9109T109IaCaaTa11B.1.36.290.000517
ORF1ab/nsp9109T109IaCaaTa11B.1.36.360.000602
ORF1ab/nsp9109T109IaCaaTa11B.1.36.90.003215
ORF1ab/nsp9109T109IaCaaTa11B.1.362.20.004717
ORF1ab/nsp9109T109IaCaaTa11B.1.3690.000285
ORF1ab/nsp9109T109IaCaaTa11B.1.4000.000429
ORF1ab/nsp9109T109IaCaaTa11B.1.4080.00369
ORF1ab/nsp9109T109IaCaaTa11B.1.4090.000781
ORF1ab/nsp9109T109IaCaaTa11B.1.4130.004255
ORF1ab/nsp9109T109IaCaaTa11B.1.4280.00102
ORF1ab/nsp9109T109IaCaaTa11B.1.4850.014925
ORF1ab/nsp9109T109IaCaaTa11B.1.5040.03125
ORF1ab/nsp9109T109IaCaaTa11B.1.5160.001957
ORF1ab/nsp9109T109IaCaaTa11B.1.5350.028571
ORF1ab/nsp9109T109IaCaaTa11B.1.5380.008065
ORF1ab/nsp9109T109IaCaaTa11B.1.564.10.001577
ORF1ab/nsp9109T109IaCaaTa11B.1.5650.00081
ORF1ab/nsp9109T109IaCaaTa11B.1.5760.000907
ORF1ab/nsp9109T109IaCaaTa11B.1.5820.000491
ORF1ab/nsp9109T109IaCaaTa11B.1.5970.00463
ORF1ab/nsp9109T109IaCaaTa11B.1.6090.000479
ORF1ab/nsp9109T109IaCaaTa11B.1.617.30.002985
ORF1ab/nsp9109T109IaCaaTa11B.1.6310.003367
ORF1ab/nsp9109T109IaCaaTa11B.310.003731
ORF1ab/nsp9109T109IaCaaTa11B.60.00091
ORF1ab/nsp9109T109IaCaaTa11C.1.20.004255
ORF1ab/nsp9109T109IaCaaTa11C.36.10.004149
ORF1ab/nsp9109T109IaCaaTa11C.36.30.000567
ORF1ab/nsp9109T109IaCaaTa11L.10.001905
ORF1ab/nsp9109T109IaCaaTa11P.1.170.000162
ORF1ab/nsp9109T109IaCaaTa11P.1.80.004785
ORF1ab/nsp9109T109IaCaaTa11P.40.003802
ORF1ab/nsp9109T109IaCaaTa11Q.40.000455
ORF1ab/nsp9109T109IaCaaTa11U.20.008772