CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = S46F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp946S46FS4186FnonsyntCctTc2121112821-12823

Details of the mutation S46F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp946S46FtCctTc2121All0.000004
ORF1ab/nsp946S46FtCctTc44B.1.1.70.000004
ORF1ab/nsp946S46FtCctTc33B.10.000027
ORF1ab/nsp946S46FtCctTc22B0.000256
ORF1ab/nsp946S46FtCctTc11AY.1200.000037
ORF1ab/nsp946S46FtCctTc11AY.40.000002
ORF1ab/nsp946S46FtCctTc11AY.440.000006
ORF1ab/nsp946S46FtCctTc11B.1.10.000018
ORF1ab/nsp946S46FtCctTc11B.1.1.280.000311
ORF1ab/nsp946S46FtCctTc11B.1.1.3010.001179
ORF1ab/nsp946S46FtCctTc11B.1.1770.000013
ORF1ab/nsp946S46FtCctTc11B.1.177.600.000218
ORF1ab/nsp946S46FtCctTc11B.1.177.70.000165
ORF1ab/nsp946S46FtCctTc11B.1.20.000009
ORF1ab/nsp946S46FtCctTc11B.1.5210.004975
ORF1ab/nsp946S46FtCctTc11B.1.6210.000089