CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = R55K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp955R55KR4195KnonsynaGaaAa9393112848-12850

Details of the mutation R55K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp955R55KaGaaAa9393All0.000018
ORF1ab/nsp955R55KaGaaAa2525B.1.617.20.000094
ORF1ab/nsp955R55KaGaaAa1212AY.1030.000075
ORF1ab/nsp955R55KaGaaAa1212AY.40.000019
ORF1ab/nsp955R55KaGaaAa55B.1.1.70.000004
ORF1ab/nsp955R55KaGaaAa44B.1.258.170.000416
ORF1ab/nsp955R55KaGaaAa33AY.250.000018
ORF1ab/nsp955R55KaGaaAa33AY.440.000018
ORF1ab/nsp955R55KaGaaAa33B.10.000027
ORF1ab/nsp955R55KaGaaAa33B.1.4000.001287
ORF1ab/nsp955R55KaGaaAa22AY.260.000057
ORF1ab/nsp955R55KaGaaAa22B.1.10.000036
ORF1ab/nsp955R55KaGaaAa22B.100.016529
ORF1ab/nsp955R55KaGaaAa11A0.000387
ORF1ab/nsp955R55KaGaaAa11AE.80.000489
ORF1ab/nsp955R55KaGaaAa11AY.230.00007
ORF1ab/nsp955R55KaGaaAa11AY.270.000065
ORF1ab/nsp955R55KaGaaAa11AY.460.000104
ORF1ab/nsp955R55KaGaaAa11AY.90.000068
ORF1ab/nsp955R55KaGaaAa11B.1.1.1220.045455
ORF1ab/nsp955R55KaGaaAa11B.1.1770.000013
ORF1ab/nsp955R55KaGaaAa11B.1.20.000009
ORF1ab/nsp955R55KaGaaAa11B.1.36.10.00114
ORF1ab/nsp955R55KaGaaAa11B.1.416.10.001563
ORF1ab/nsp955R55KaGaaAa11B.1.4290.000024
ORF1ab/nsp955R55KaGaaAa11B.1.5090.000866
ORF1ab/nsp955R55KaGaaAa11B.1.5260.000024
ORF1ab/nsp955R55KaGaaAa11B.1.6370.000073
ORF1ab/nsp955R55KaGaaAa11B.400.000364
ORF1ab/nsp955R55KaGaaAa11P.10.000016