CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = L42P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp942L42PL4182PnonsyncTtcCt12110.91666712809-12811
ORF1ab/nsp942L42PL4182PnonsyncTTcCC1210.083333312809-12811

Details of the mutation L42P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp942L42PcTtcCt1112All0.000002
ORF1ab/nsp942L42PcTTcCC112All0
ORF1ab/nsp942L42PcTtcCt44B.1.1.70.000004
ORF1ab/nsp942L42PcTtcCt11AY.1030.000006
ORF1ab/nsp942L42PcTtcCt11AY.40.000002
ORF1ab/nsp942L42PcTtcCt11AY.530.000288
ORF1ab/nsp942L42PcTtcCt11B.10.000009
ORF1ab/nsp942L42PcTtcCt11B.1.1770.000013
ORF1ab/nsp942L42PcTtcCt11B.1.3380.008621
ORF1ab/nsp942L42PcTtcCt11B.1.4290.000024
ORF1ab/nsp942L42PcTTcCC11B.1.617.20.000004