CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : Mut = A16A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp916A16AA4156AsyngcCgcT300226360.87808112731-12733
ORF1ab/nsp916A16AA4156AsyngcCgcA30023660.12191912731-12733

Details of the mutation A16A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp916A16AgcCgcT26363002All0.000504
ORF1ab/nsp916A16AgcCgcA3663002All0.00007
ORF1ab/nsp916A16AgcCgcT693693B.1.1770.009125
ORF1ab/nsp916A16AgcCgcA244244B.1.1.2430.995918
ORF1ab/nsp916A16AgcCgcT228232AY.40.000355
ORF1ab/nsp916A16AgcCgcA4232AY.40.000006
ORF1ab/nsp916A16AgcCgcT184198B.1.1.70.000165
ORF1ab/nsp916A16AgcCgcA14198B.1.1.70.000013
ORF1ab/nsp916A16AgcCgcT157158AY.1030.000975
ORF1ab/nsp916A16AgcCgcA1158AY.1030.000006
ORF1ab/nsp916A16AgcCgcT143143B.1.4270.007221
ORF1ab/nsp916A16AgcCgcT9298B.1.617.20.000346
ORF1ab/nsp916A16AgcCgcA698B.1.617.20.000023
ORF1ab/nsp916A16AgcCgcT9393P.10.001465
ORF1ab/nsp916A16AgcCgcT9292B.1.2400.019832
ORF1ab/nsp916A16AgcCgcT7576AY.440.000457
ORF1ab/nsp916A16AgcCgcA176AY.440.000006
ORF1ab/nsp916A16AgcCgcT5656B.1.4290.001318
ORF1ab/nsp916A16AgcCgcT4649AY.430.000204
ORF1ab/nsp916A16AgcCgcA349AY.430.000013
ORF1ab/nsp916A16AgcCgcA3047B.1.10.000544
ORF1ab/nsp916A16AgcCgcT1747B.1.10.000308
ORF1ab/nsp916A16AgcCgcT3939B.1.1.5190.001549
ORF1ab/nsp916A16AgcCgcT3737AY.420.001489
ORF1ab/nsp916A16AgcCgcT3637B.1.20.000317
ORF1ab/nsp916A16AgcCgcA137B.1.20.000009
ORF1ab/nsp916A16AgcCgcT3636B.1.1.2140.001996
ORF1ab/nsp916A16AgcCgcT3535Q.10.004421
ORF1ab/nsp916A16AgcCgcT2430B.10.00022
ORF1ab/nsp916A16AgcCgcA630B.10.000055
ORF1ab/nsp916A16AgcCgcT2828AY.1020.000742
ORF1ab/nsp916A16AgcCgcT2425AY.470.000747
ORF1ab/nsp916A16AgcCgcA125AY.470.000031
ORF1ab/nsp916A16AgcCgcT2124AY.30.000209
ORF1ab/nsp916A16AgcCgcA324AY.30.00003
ORF1ab/nsp916A16AgcCgcT2123AY.50.000434
ORF1ab/nsp916A16AgcCgcA223AY.50.000041
ORF1ab/nsp916A16AgcCgcT2323AY.850.009825
ORF1ab/nsp916A16AgcCgcT2323B.1.2580.001531
ORF1ab/nsp916A16AgcCgcT1722AY.250.000102
ORF1ab/nsp916A16AgcCgcA522AY.250.00003
ORF1ab/nsp916A16AgcCgcT1617B.1.1600.000499
ORF1ab/nsp916A16AgcCgcA117B.1.1600.000031
ORF1ab/nsp916A16AgcCgcT916AY.1000.000414
ORF1ab/nsp916A16AgcCgcA716AY.1000.000322
ORF1ab/nsp916A16AgcCgcT1414AY.290.000221
ORF1ab/nsp916A16AgcCgcT1313AY.360.001927
ORF1ab/nsp916A16AgcCgcT1212AY.140.001056
ORF1ab/nsp916A16AgcCgcT1212B.1.2210.000852
ORF1ab/nsp916A16AgcCgcT1111B.1.4260.0111
ORF1ab/nsp916A16AgcCgcT1010AE.80.00489
ORF1ab/nsp916A16AgcCgcT1010B.1.6020.065359
ORF1ab/nsp916A16AgcCgcT69AY.260.00017
ORF1ab/nsp916A16AgcCgcA39AY.260.000085
ORF1ab/nsp916A16AgcCgcT99AY.390.000222
ORF1ab/nsp916A16AgcCgcT99B.1.3110.002471
ORF1ab/nsp916A16AgcCgcT88AY.540.000763
ORF1ab/nsp916A16AgcCgcT88B.1.1.3660.126984
ORF1ab/nsp916A16AgcCgcT88P.1.140.000382
ORF1ab/nsp916A16AgcCgcT57AY.200.000194
ORF1ab/nsp916A16AgcCgcA27AY.200.000078
ORF1ab/nsp916A16AgcCgcT77B.1.3510.000208
ORF1ab/nsp916A16AgcCgcT66AY.1190.000212
ORF1ab/nsp916A16AgcCgcT56AY.9.20.000184
ORF1ab/nsp916A16AgcCgcA16AY.9.20.000037
ORF1ab/nsp916A16AgcCgcT66B.1.1.2840.000644
ORF1ab/nsp916A16AgcCgcT66B.1.160.300.017857
ORF1ab/nsp916A16AgcCgcT46C.370.000464
ORF1ab/nsp916A16AgcCgcA26C.370.000232
ORF1ab/nsp916A16AgcCgcT55AY.330.000334
ORF1ab/nsp916A16AgcCgcT55AY.75.10.000902
ORF1ab/nsp916A16AgcCgcA35B0.000383
ORF1ab/nsp916A16AgcCgcT25B0.000256
ORF1ab/nsp916A16AgcCgcT55B.1.1.1220.227273
ORF1ab/nsp916A16AgcCgcT55B.1.1.280.001556
ORF1ab/nsp916A16AgcCgcT55B.1.177.670.038168
ORF1ab/nsp916A16AgcCgcT55B.1.3690.001426
ORF1ab/nsp916A16AgcCgcA55B.1.416.10.007812
ORF1ab/nsp916A16AgcCgcT55B.1.5610.001985
ORF1ab/nsp916A16AgcCgcT44AY.1200.000149
ORF1ab/nsp916A16AgcCgcT44AY.60.000165
ORF1ab/nsp916A16AgcCgcT34B.1.2430.000209
ORF1ab/nsp916A16AgcCgcA14B.1.2430.00007
ORF1ab/nsp916A16AgcCgcT44B.1.6210.000354
ORF1ab/nsp916A16AgcCgcT44D.20.0003
ORF1ab/nsp916A16AgcCgcT44P.1.120.001936
ORF1ab/nsp916A16AgcCgcT44P.1.150.000929
ORF1ab/nsp916A16AgcCgcT33AT.10.015385
ORF1ab/nsp916A16AgcCgcT33AY.10.001187
ORF1ab/nsp916A16AgcCgcT33AY.29.10.000662
ORF1ab/nsp916A16AgcCgcT33AY.400.002893
ORF1ab/nsp916A16AgcCgcT33AY.450.000365
ORF1ab/nsp916A16AgcCgcT33AY.46.60.000217
ORF1ab/nsp916A16AgcCgcT33AY.700.000626
ORF1ab/nsp916A16AgcCgcT23B.1.1.700.000682
ORF1ab/nsp916A16AgcCgcA13B.1.1.700.000341
ORF1ab/nsp916A16AgcCgcT33B.1.177.770.002179
ORF1ab/nsp916A16AgcCgcT33B.1.5960.000261
ORF1ab/nsp916A16AgcCgcA33B.1.780.025641
ORF1ab/nsp916A16AgcCgcA23R.10.00018
ORF1ab/nsp916A16AgcCgcT13R.10.00009
ORF1ab/nsp916A16AgcCgcT22A.2.50.000998
ORF1ab/nsp916A16AgcCgcT22A.270.003311
ORF1ab/nsp916A16AgcCgcT22AY.190.002281
ORF1ab/nsp916A16AgcCgcT22AY.3.10.000171
ORF1ab/nsp916A16AgcCgcT22AY.340.000194
ORF1ab/nsp916A16AgcCgcT22AY.39.10.000079
ORF1ab/nsp916A16AgcCgcT22AY.4.2.10.000298
ORF1ab/nsp916A16AgcCgcT22AY.610.00021
ORF1ab/nsp916A16AgcCgcT22AY.790.002421
ORF1ab/nsp916A16AgcCgcT22AY.90.000135
ORF1ab/nsp916A16AgcCgcT22AY.980.000158
ORF1ab/nsp916A16AgcCgcT22AY.98.10.000097
ORF1ab/nsp916A16AgcCgcT22B.1.1.2690.002706
ORF1ab/nsp916A16AgcCgcA22B.1.1.3700.025316
ORF1ab/nsp916A16AgcCgcT22B.1.177.400.010309
ORF1ab/nsp916A16AgcCgcT22B.1.177.570.000562
ORF1ab/nsp916A16AgcCgcT22B.1.177.600.000437
ORF1ab/nsp916A16AgcCgcT22B.1.177.730.001133
ORF1ab/nsp916A16AgcCgcT22B.1.2410.001623
ORF1ab/nsp916A16AgcCgcA22B.1.360.000292
ORF1ab/nsp916A16AgcCgcT22B.1.36.290.001035
ORF1ab/nsp916A16AgcCgcT22B.1.4410.019231
ORF1ab/nsp916A16AgcCgcT22B.1.6200.001892
ORF1ab/nsp916A16AgcCgcT22B.1.930.001867
ORF1ab/nsp916A16AgcCgcT11AY.1130.000142
ORF1ab/nsp916A16AgcCgcT11AY.116.10.000311
ORF1ab/nsp916A16AgcCgcT11AY.1170.000085
ORF1ab/nsp916A16AgcCgcT11AY.130.000161
ORF1ab/nsp916A16AgcCgcT11AY.20.000356
ORF1ab/nsp916A16AgcCgcT11AY.230.00007
ORF1ab/nsp916A16AgcCgcT11AY.270.000065
ORF1ab/nsp916A16AgcCgcA11AY.320.000532
ORF1ab/nsp916A16AgcCgcT11AY.350.000233
ORF1ab/nsp916A16AgcCgcT11AY.39.1.10.000725
ORF1ab/nsp916A16AgcCgcT11AY.4.40.000409
ORF1ab/nsp916A16AgcCgcT11AY.410.000294
ORF1ab/nsp916A16AgcCgcT11AY.460.000104
ORF1ab/nsp916A16AgcCgcT11AY.46.10.001027
ORF1ab/nsp916A16AgcCgcT11AY.46.30.000934
ORF1ab/nsp916A16AgcCgcT11AY.46.40.000165
ORF1ab/nsp916A16AgcCgcT11AY.5.20.002463
ORF1ab/nsp916A16AgcCgcT11AY.530.000288
ORF1ab/nsp916A16AgcCgcA11AY.560.001605
ORF1ab/nsp916A16AgcCgcA11AY.650.000533
ORF1ab/nsp916A16AgcCgcT11AY.670.000464
ORF1ab/nsp916A16AgcCgcT11AY.680.000274
ORF1ab/nsp916A16AgcCgcT11AY.7.10.000113
ORF1ab/nsp916A16AgcCgcT11AY.890.004902
ORF1ab/nsp916A16AgcCgcT11AY.9.10.000084
ORF1ab/nsp916A16AgcCgcT11AY.910.00073
ORF1ab/nsp916A16AgcCgcT11AY.990.001049
ORF1ab/nsp916A16AgcCgcT11AY.99.20.000092
ORF1ab/nsp916A16AgcCgcT11B.1.1.1760.000439
ORF1ab/nsp916A16AgcCgcA11B.1.1.1920.002309
ORF1ab/nsp916A16AgcCgcA11B.1.1.3090.005848
ORF1ab/nsp916A16AgcCgcT11B.1.1.3760.005952
ORF1ab/nsp916A16AgcCgcT11B.1.1.390.00051
ORF1ab/nsp916A16AgcCgcT11B.1.1.4090.002833
ORF1ab/nsp916A16AgcCgcT11B.1.1.4340.000349
ORF1ab/nsp916A16AgcCgcT11B.1.1050.009615
ORF1ab/nsp916A16AgcCgcT11B.1.1110.001175
ORF1ab/nsp916A16AgcCgcT11B.1.1260.001276
ORF1ab/nsp916A16AgcCgcT11B.1.177.210.000076
ORF1ab/nsp916A16AgcCgcT11B.1.177.50.001242
ORF1ab/nsp916A16AgcCgcT11B.1.177.530.002392
ORF1ab/nsp916A16AgcCgcT11B.1.177.690.001484
ORF1ab/nsp916A16AgcCgcT11B.1.177.850.005435
ORF1ab/nsp916A16AgcCgcT11B.1.2650.001271
ORF1ab/nsp916A16AgcCgcA11B.1.3010.005917
ORF1ab/nsp916A16AgcCgcT11B.1.351.30.000876
ORF1ab/nsp916A16AgcCgcA11B.1.36.100.004785
ORF1ab/nsp916A16AgcCgcT11B.1.36.170.000494
ORF1ab/nsp916A16AgcCgcT11B.1.36.260.002857
ORF1ab/nsp916A16AgcCgcT11B.1.3670.000792
ORF1ab/nsp916A16AgcCgcT11B.1.3820.008929
ORF1ab/nsp916A16AgcCgcT11B.1.438.10.000107
ORF1ab/nsp916A16AgcCgcT11B.1.466.20.000391
ORF1ab/nsp916A16AgcCgcT11B.1.4690.00361
ORF1ab/nsp916A16AgcCgcT11B.1.5160.001957
ORF1ab/nsp916A16AgcCgcT11B.1.5210.004975
ORF1ab/nsp916A16AgcCgcT11B.1.5260.000024
ORF1ab/nsp916A16AgcCgcT11B.1.5380.008065
ORF1ab/nsp916A16AgcCgcT11B.1.5580.004566
ORF1ab/nsp916A16AgcCgcT11B.1.5640.000426
ORF1ab/nsp916A16AgcCgcT11B.1.5650.00081
ORF1ab/nsp916A16AgcCgcT11B.1.5750.000303
ORF1ab/nsp916A16AgcCgcT11B.1.5760.000907
ORF1ab/nsp916A16AgcCgcT11B.1.5770.000687
ORF1ab/nsp916A16AgcCgcT11B.1.6090.000479
ORF1ab/nsp916A16AgcCgcT11B.1.6190.000871
ORF1ab/nsp916A16AgcCgcT11B.1.6230.000536
ORF1ab/nsp916A16AgcCgcT11B.1.9.50.005682
ORF1ab/nsp916A16AgcCgcA11B.60.00091
ORF1ab/nsp916A16AgcCgcA11B.6.60.000889
ORF1ab/nsp916A16AgcCgcT11C.36.3.10.002717
ORF1ab/nsp916A16AgcCgcT11P.1.160.000374
ORF1ab/nsp916A16AgcCgcT11P.1.80.004785
ORF1ab/nsp916A16AgcCgcA11Q.80.000165