CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp9 | 93 | G93G | G4233G | syn | ggA | ggG | 5798 | 5705 | 0.98396 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93G | G4233G | syn | ggA | ggT | 5798 | 49 | 0.00845119 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93G | G4233G | syn | ggA | ggC | 5798 | 44 | 0.00758882 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93R | G4233R | nonsyn | Gga | Aga | 57 | 55 | 0.964912 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93R | G4233R | nonsyn | Gga | Cga | 57 | 2 | 0.0350877 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93del | G4233del | del | GGA | --- | 52 | 52 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93X | G4233X | nonsyn | Gga | Tga | 12 | 12 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93V | G4233V | nonsyn | gGa | gTa | 8 | 8 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93del2 | G4233del2 | del | gGA | g-- | 6 | 3 | 0.5 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93del2 | G4233del2 | del | GGa | --a | 6 | 2 | 0.333333 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93del2 | G4233del2 | del | GGA | --G | 6 | 1 | 0.166667 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93C | G4233C | nonsyn | GgA | TgC | 4 | 4 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93E | G4233E | nonsyn | gGa | gAa | 4 | 4 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93A | G4233A | nonsyn | gGa | gCa | 2 | 2 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93K | G4233K | nonsyn | GGA | AAG | 1 | 1 | 1 | 12962-12964 |
ORF1ab/nsp9 | 93 | G93del1 | G4233del1 | del | GgA | Ag- | 1 | 1 | 1 | 12962-12964 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 5705 | 5798 | All | 0.001091 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 49 | 5798 | All | 0.000009 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 44 | 5798 | All | 0.000008 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 4915 | 4915 | P.2 | 0.91732 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 238 | 238 | AD.1 | 0.979424 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 99 | 114 | B.1.1.7 | 0.000089 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 11 | 114 | B.1.1.7 | 0.00001 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 4 | 114 | B.1.1.7 | 0.000004 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 55 | 57 | All | 0.000011 |
ORF1ab/nsp9 | 93 | G93R | Gga | Cga | 2 | 57 | All | 0 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 52 | 52 | All | 0.00001 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 52 | 52 | B.1.36.18 | 0.021849 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 40 | 40 | AY.25 | 0.000241 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 33 | 37 | AY.103 | 0.000205 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 4 | 37 | AY.103 | 0.000025 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 33 | 36 | AY.4 | 0.000051 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 3 | 36 | AY.4 | 0.000005 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 33 | 33 | AY.44 | 0.000201 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 27 | 31 | B.1 | 0.000247 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 3 | 31 | B.1 | 0.000027 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 1 | 31 | B.1 | 0.000009 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 26 | 26 | AY.75.1 | 0.004688 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 24 | 24 | AY.75 | 0.001345 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 21 | 22 | B.1.617.2 | 0.000079 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 1 | 22 | B.1.617.2 | 0.000004 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 21 | 21 | AY.3 | 0.000209 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 16 | 20 | B.1.2 | 0.000141 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 3 | 20 | B.1.2 | 0.000026 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 1 | 20 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 17 | 17 | B.1.2 | 0.00015 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 16 | 16 | AY.27 | 0.001036 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 15 | 15 | B.1.1 | 0.000272 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 12 | 12 | All | 0.000002 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 12 | 12 | B.1.575 | 0.003641 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 10 | 10 | B.1.1.315 | 0.084746 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 9 | 9 | AY.102 | 0.000239 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 7 | 9 | AY.43 | 0.000031 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 9 | AY.43 | 0.000009 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 8 | 8 | All | 0.000002 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 5 | 8 | P.1 | 0.000079 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 3 | 8 | P.1 | 0.000047 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 7 | 7 | AY.3 | 0.00007 |
ORF1ab/nsp9 | 93 | G93del2 | gGA | g-- | 3 | 6 | All | 0.000001 |
ORF1ab/nsp9 | 93 | G93del2 | GGa | --a | 2 | 6 | All | 0 |
ORF1ab/nsp9 | 93 | G93del2 | GGA | --G | 1 | 6 | All | 0 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 6 | 6 | B.1.1.519 | 0.000238 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 6 | 6 | B.1.471 | 0.016393 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 5 | 5 | AY.11 | 0.006693 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 5 | 5 | B.1.1.28 | 0.001556 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 5 | 5 | B.1.221 | 0.000355 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp9 | 93 | G93C | GgA | TgC | 4 | 4 | All | 0.000001 |
ORF1ab/nsp9 | 93 | G93E | gGa | gAa | 4 | 4 | All | 0.000001 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 4 | 4 | P.1.1 | 0.001271 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 3 | 3 | A.2.5.3 | 0.030928 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 3 | AY.4.2 | 0.000043 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 1 | 3 | AY.4.2 | 0.000022 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 3 | 3 | B.1.160.26 | 0.007264 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 3 | 3 | B.1.177.8 | 0.002257 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 3 | 3 | B.1.381 | 0.023438 |
ORF1ab/nsp9 | 93 | G93A | gGa | gCa | 2 | 2 | All | 0 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp9 | 93 | G93R | Gga | Cga | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 2 | 2 | B.1.1.426 | 0.071429 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 2 | 2 | B.1.636 | 0.013423 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 2 | P.1.10 | 0.000269 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 1 | 2 | P.1.10 | 0.000269 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | 0.055556 | |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp9 | 93 | G93K | GGA | AAG | 1 | 1 | All | 0 |
ORF1ab/nsp9 | 93 | G93del1 | GgA | Ag- | 1 | 1 | All | 0 |
ORF1ab/nsp9 | 93 | G93del2 | gGA | g-- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp9 | 93 | G93del2 | gGA | g-- | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp9 | 93 | G93E | gGa | gAa | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp9 | 93 | G93E | gGa | gAa | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp9 | 93 | G93K | GGA | AAG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp9 | 93 | G93A | gGa | gCa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp9 | 93 | G93del1 | GgA | Ag- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp9 | 93 | G93del2 | gGA | g-- | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 1 | 1 | B | 0.000128 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B | 0.000128 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.1.128 | 0.007092 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp9 | 93 | G93E | gGa | gAa | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp9 | 93 | G93C | GgA | TgC | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp9 | 93 | G93V | gGa | gTa | 1 | 1 | B.1.160.20 | 0.008929 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp9 | 93 | G93del2 | GGa | --a | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggC | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp9 | 93 | G93E | gGa | gAa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 93 | G93C | GgA | TgC | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp9 | 93 | G93C | GgA | TgC | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp9 | 93 | G93C | GgA | TgC | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.407 | 0.035714 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp9 | 93 | G93R | Gga | Cga | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp9 | 93 | G93del2 | GGA | --G | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp9 | 93 | G93del2 | GGa | --a | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp9 | 93 | G93A | gGa | gCa | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp9 | 93 | G93R | Gga | Aga | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | B.34 | 0.013699 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggG | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp9 | 93 | G93X | Gga | Tga | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp9 | 93 | G93G | ggA | ggT | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp9 | 93 | G93del | GGA | --- | 1 | 1 | U.3 | 0.003861 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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