CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : CodonNum = 49 & Codon = caT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp949Q49HQ4189HnonsyncaGcaT230322790.98957912830-12832

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp949Q49HcaGcaT22792303All0.000436
ORF1ab/nsp949Q49HcaGcaT12951295B.1.110.30.930316
ORF1ab/nsp949Q49HcaGcaT190190AY.390.004695
ORF1ab/nsp949Q49HcaGcaT95118B.1.1.70.000085
ORF1ab/nsp949Q49HcaGcaT8787AY.1170.007353
ORF1ab/nsp949Q49HcaGcaT5959AY.40.000092
ORF1ab/nsp949Q49HcaGcaT4848B.1.617.20.000181
ORF1ab/nsp949Q49HcaGcaT4343AY.710.020428
ORF1ab/nsp949Q49HcaGcaT4040B.10.000366
ORF1ab/nsp949Q49HcaGcaT3535AY.440.000213
ORF1ab/nsp949Q49HcaGcaT3232AY.4.50.00344
ORF1ab/nsp949Q49HcaGcaT2828AY.430.000124
ORF1ab/nsp949Q49HcaGcaT2525AY.1030.000155
ORF1ab/nsp949Q49HcaGcaT2525AY.470.000778
ORF1ab/nsp949Q49HcaGcaT2020B.1.4290.000471
ORF1ab/nsp949Q49HcaGcaT1717B.1.1770.000224
ORF1ab/nsp949Q49HcaGcaT1313AY.840.005687
ORF1ab/nsp949Q49HcaGcaT1313AY.98.10.00063
ORF1ab/nsp949Q49HcaGcaT1212AY.50.000248
ORF1ab/nsp949Q49HcaGcaT1010AY.250.00006
ORF1ab/nsp949Q49HcaGcaT1010B.1.10.000181
ORF1ab/nsp949Q49HcaGcaT99B.1.2400.00194
ORF1ab/nsp949Q49HcaGcaT99B.1.5260.000212
ORF1ab/nsp949Q49HcaGcaT99P.1.140.00043
ORF1ab/nsp949Q49HcaGcaT88AY.610.000838
ORF1ab/nsp949Q49HcaGcaT88B.1.1.2190.04
ORF1ab/nsp949Q49HcaGcaT77AY.1020.000186
ORF1ab/nsp949Q49HcaGcaT56AY.1190.000177
ORF1ab/nsp949Q49HcaGcaT66B.1.1.2140.000333
ORF1ab/nsp949Q49HcaGcaT66B.1.1.4340.002091
ORF1ab/nsp949Q49HcaGcaT55B.1.20.000044
ORF1ab/nsp949Q49HcaGcaT55B.1.2580.000333
ORF1ab/nsp949Q49HcaGcaT44AY.920.001149
ORF1ab/nsp949Q49HcaGcaT44B.1.1.2650.012618
ORF1ab/nsp949Q49HcaGcaT44B.1.351.50.002398
ORF1ab/nsp949Q49HcaGcaT44P.10.000063
ORF1ab/nsp949Q49HcaGcaT33AY.120.000948
ORF1ab/nsp949Q49HcaGcaT33AY.30.00003
ORF1ab/nsp949Q49HcaGcaT33AY.460.000312
ORF1ab/nsp949Q49HcaGcaT33AZ.20.002463
ORF1ab/nsp949Q49HcaGcaT33B0.000383
ORF1ab/nsp949Q49HcaGcaT33B.1.1.280.000934
ORF1ab/nsp949Q49HcaGcaT33B.1.1100.013575
ORF1ab/nsp949Q49HcaGcaT33B.1.177.810.000568
ORF1ab/nsp949Q49HcaGcaT22AY.1180.000125
ORF1ab/nsp949Q49HcaGcaT22AY.140.000176
ORF1ab/nsp949Q49HcaGcaT22AY.330.000134
ORF1ab/nsp949Q49HcaGcaT22AY.340.000194
ORF1ab/nsp949Q49HcaGcaT22AY.4.20.000043
ORF1ab/nsp949Q49HcaGcaT22AY.480.00093
ORF1ab/nsp949Q49HcaGcaT22B.1.4270.000101
ORF1ab/nsp949Q49HcaGcaT11A.2.50.000499
ORF1ab/nsp949Q49HcaGcaT11AY.1000.000046
ORF1ab/nsp949Q49HcaGcaT11AY.1060.000335
ORF1ab/nsp949Q49HcaGcaT11AY.1140.000231
ORF1ab/nsp949Q49HcaGcaT11AY.1160.000287
ORF1ab/nsp949Q49HcaGcaT11AY.1200.000037
ORF1ab/nsp949Q49HcaGcaT11AY.260.000028
ORF1ab/nsp949Q49HcaGcaT11AY.270.000065
ORF1ab/nsp949Q49HcaGcaT11AY.290.000016
ORF1ab/nsp949Q49HcaGcaT11AY.350.000233
ORF1ab/nsp949Q49HcaGcaT11AY.360.000148
ORF1ab/nsp949Q49HcaGcaT11AY.39.10.00004
ORF1ab/nsp949Q49HcaGcaT11AY.420.00004
ORF1ab/nsp949Q49HcaGcaT11AY.540.000095
ORF1ab/nsp949Q49HcaGcaT11AY.60.000041
ORF1ab/nsp949Q49HcaGcaT11AY.640.000595
ORF1ab/nsp949Q49HcaGcaT11AY.650.000533
ORF1ab/nsp949Q49HcaGcaT11AY.740.000116
ORF1ab/nsp949Q49HcaGcaT11AY.90.000068
ORF1ab/nsp949Q49HcaGcaT11AY.9.20.000037
ORF1ab/nsp949Q49HcaGcaT11AY.980.000079
ORF1ab/nsp949Q49HcaGcaT11AY.99.20.000092
ORF1ab/nsp949Q49HcaGcaT11B.1.1.1280.007092
ORF1ab/nsp949Q49HcaGcaT11B.1.1.150.013514
ORF1ab/nsp949Q49HcaGcaT11B.1.1.2400.004695
ORF1ab/nsp949Q49HcaGcaT11B.1.1.2840.000107
ORF1ab/nsp949Q49HcaGcaT11B.1.1.3720.000689
ORF1ab/nsp949Q49HcaGcaT11B.1.1.4320.001266
ORF1ab/nsp949Q49HcaGcaT11B.1.1.500.000679
ORF1ab/nsp949Q49HcaGcaT11B.1.1.5190.00004
ORF1ab/nsp949Q49HcaGcaT11B.1.1.520.012195
ORF1ab/nsp949Q49HcaGcaT11B.1.177.120.000152
ORF1ab/nsp949Q49HcaGcaT11B.1.2140.003663
ORF1ab/nsp949Q49HcaGcaT11B.1.2210.000071
ORF1ab/nsp949Q49HcaGcaT11B.1.2340.000132
ORF1ab/nsp949Q49HcaGcaT11B.1.3320.003497
ORF1ab/nsp949Q49HcaGcaT11B.1.351.20.000303
ORF1ab/nsp949Q49HcaGcaT11B.1.351.30.000876
ORF1ab/nsp949Q49HcaGcaT11B.1.36.290.000517
ORF1ab/nsp949Q49HcaGcaT11B.1.5300.007143
ORF1ab/nsp949Q49HcaGcaT11B.1.5470.02439
ORF1ab/nsp949Q49HcaGcaT11B.1.5790.011236
ORF1ab/nsp949Q49HcaGcaT11B.1.5960.000087
ORF1ab/nsp949Q49HcaGcaT11B.1.6090.000479
ORF1ab/nsp949Q49HcaGcaT11B.1.6210.000089
ORF1ab/nsp949Q49HcaGcaT11B.1.6370.000073
ORF1ab/nsp949Q49HcaGcaT11C.370.000116
ORF1ab/nsp949Q49HcaGcaT11P.1.150.000232
ORF1ab/nsp949Q49HcaGcaT11P.1.170.000162
ORF1ab/nsp949Q49HcaGcaT11P.1.90.004808
ORF1ab/nsp949Q49HcaGcaT11P.20.000187