CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : CodonNum = 49 & Codon = ca-

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp949Q49del1Q4189del1delcaGca-840.512830-12832

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp949Q49del1caGca-48All0.000001
ORF1ab/nsp949Q49del1caGca-11AY.1000.000046
ORF1ab/nsp949Q49del1caGca-11AY.50.000021
ORF1ab/nsp949Q49del1caGca-11B.1.20.000009
ORF1ab/nsp949Q49del1caGca-11B.1.4290.000024