CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : CodonNum = 49 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp949Q49delQ4189deldelCAG---3232112830-12832

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp949Q49delCAG---3232All0.000006
ORF1ab/nsp949Q49delCAG---1010B.1.1.70.000009
ORF1ab/nsp949Q49delCAG---22AY.40.000003
ORF1ab/nsp949Q49delCAG---22AY.430.000009
ORF1ab/nsp949Q49delCAG---11AY.340.000097
ORF1ab/nsp949Q49delCAG---11AY.5.30.000337
ORF1ab/nsp949Q49delCAG---11AY.720.001361
ORF1ab/nsp949Q49delCAG---11AY.75.10.00018
ORF1ab/nsp949Q49delCAG---11B.10.000009
ORF1ab/nsp949Q49delCAG---11B.1.1.10.000327
ORF1ab/nsp949Q49delCAG---11B.1.1.3480.000796
ORF1ab/nsp949Q49delCAG---11B.1.1770.000013
ORF1ab/nsp949Q49delCAG---11B.1.177.150.000631
ORF1ab/nsp949Q49delCAG---11B.1.177.540.000606
ORF1ab/nsp949Q49delCAG---11B.1.177.810.000189
ORF1ab/nsp949Q49delCAG---11B.1.177.830.001481
ORF1ab/nsp949Q49delCAG---11B.1.258.30.001675
ORF1ab/nsp949Q49delCAG---11B.1.3110.000275
ORF1ab/nsp949Q49delCAG---11B.1.4000.000429
ORF1ab/nsp949Q49delCAG---11B.1.5250.000113
ORF1ab/nsp949Q49delCAG---11D.20.000075
ORF1ab/nsp949Q49delCAG---11N.40.004255