CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : CodonNum = 42 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp942L42LL4182LsynctTctA173914840.85336412809-12811

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp942L42LctTctA14841739All0.000284
ORF1ab/nsp942L42LctTctA13581358B.1.5260.031919
ORF1ab/nsp942L42LctTctA1735B.1.1.70.000015
ORF1ab/nsp942L42LctTctA2729P.10.000425
ORF1ab/nsp942L42LctTctA916B.1.617.20.000034
ORF1ab/nsp942L42LctTctA914B.1.10.000163
ORF1ab/nsp942L42LctTctA49AY.130.000644
ORF1ab/nsp942L42LctTctA89B.1.4290.000188
ORF1ab/nsp942L42LctTctA48AY.250.000024
ORF1ab/nsp942L42LctTctA28AY.40.000003
ORF1ab/nsp942L42LctTctA58AY.440.00003
ORF1ab/nsp942L42LctTctA38B.10.000027
ORF1ab/nsp942L42LctTctA17B.1.3510.00003
ORF1ab/nsp942L42LctTctA66AY.4.20.00013
ORF1ab/nsp942L42LctTctA46B.1.20.000035
ORF1ab/nsp942L42LctTctA55AY.1020.000133
ORF1ab/nsp942L42LctTctA23AY.430.000009
ORF1ab/nsp942L42LctTctA13AY.470.000031
ORF1ab/nsp942L42LctTctA33AY.630.001161
ORF1ab/nsp942L42LctTctA33C.370.000348
ORF1ab/nsp942L42LctTctA12AY.230.00007
ORF1ab/nsp942L42LctTctA22AY.540.000191
ORF1ab/nsp942L42LctTctA22B.1.6200.001892
ORF1ab/nsp942L42LctTctA11AY.1100.000113
ORF1ab/nsp942L42LctTctA11AY.320.000532
ORF1ab/nsp942L42LctTctA11AY.390.000025
ORF1ab/nsp942L42LctTctA11B.1.1.3060.000438
ORF1ab/nsp942L42LctTctA11B.1.1.5070.008696
ORF1ab/nsp942L42LctTctA11B.1.177.620.001192
ORF1ab/nsp942L42LctTctA11B.1.466.20.000391
ORF1ab/nsp942L42LctTctA11B.1.5250.000113