CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp9 : CodonNum = 42 & Codon = Ttt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp942L42FL4182FnonsynCttTtt2468424684112809-12811

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp942L42FCttTtt2468424684All0.004721
ORF1ab/nsp942L42FCttTtt1268512685B.1.1.70.011356
ORF1ab/nsp942L42FCttTtt69546954AY.30.069167
ORF1ab/nsp942L42FCttTtt927927B.1.1.3330.997847
ORF1ab/nsp942L42FCttTtt507507B.1.10.009197
ORF1ab/nsp942L42FCttTtt463463AY.470.014402
ORF1ab/nsp942L42FCttTtt336336AY.40.000523
ORF1ab/nsp942L42FCttTtt308308AY.430.001365
ORF1ab/nsp942L42FCttTtt300300AY.250.001804
ORF1ab/nsp942L42FCttTtt266266B.1.20.002342
ORF1ab/nsp942L42FCttTtt186186B.1.617.20.0007
ORF1ab/nsp942L42FCttTtt183183AY.360.027123
ORF1ab/nsp942L42FCttTtt111111B.10.001017
ORF1ab/nsp942L42FCttTtt101101AY.440.000615
ORF1ab/nsp942L42FCttTtt9090AY.1020.002386
ORF1ab/nsp942L42FCttTtt8282B.1.1.280.025521
ORF1ab/nsp942L42FCttTtt7979B.1.1770.00104
ORF1ab/nsp942L42FCttTtt7777B.1.4130.32766
ORF1ab/nsp942L42FCttTtt7676Q.40.034561
ORF1ab/nsp942L42FCttTtt6666B.1.1.1920.152425
ORF1ab/nsp942L42FCttTtt3838AY.1170.003212
ORF1ab/nsp942L42FCttTtt3737AY.420.001489
ORF1ab/nsp942L42FCttTtt3535AY.1160.010037
ORF1ab/nsp942L42FCttTtt3434AY.1030.000211
ORF1ab/nsp942L42FCttTtt3030B.1.6210.002656
ORF1ab/nsp942L42FCttTtt3030Q.80.004947
ORF1ab/nsp942L42FCttTtt2424B.1.3490.017155
ORF1ab/nsp942L42FCttTtt2323B.1.5960.002004
ORF1ab/nsp942L42FCttTtt2222AY.390.000544
ORF1ab/nsp942L42FCttTtt1818AY.610.001886
ORF1ab/nsp942L42FCttTtt1717AY.1190.0006
ORF1ab/nsp942L42FCttTtt1717B.1.177.860.003119
ORF1ab/nsp942L42FCttTtt1717B.1.617.10.002192
ORF1ab/nsp942L42FCttTtt1616AY.730.010645
ORF1ab/nsp942L42FCttTtt1616Q.10.002021
ORF1ab/nsp942L42FCttTtt1414B.1.1600.000437
ORF1ab/nsp942L42FCttTtt1414B.1.3400.060086
ORF1ab/nsp942L42FCttTtt1313AY.920.003735
ORF1ab/nsp942L42FCttTtt1212AY.1110.002198
ORF1ab/nsp942L42FCttTtt1212AY.50.000248
ORF1ab/nsp942L42FCttTtt1212AY.98.10.000581
ORF1ab/nsp942L42FCttTtt1212B.1.177.730.006795
ORF1ab/nsp942L42FCttTtt1111AY.1000.000506
ORF1ab/nsp942L42FCttTtt1111AY.260.000311
ORF1ab/nsp942L42FCttTtt1111AY.980.000869
ORF1ab/nsp942L42FCttTtt1111B.1.3510.000327
ORF1ab/nsp942L42FCttTtt1010AY.160.003797
ORF1ab/nsp942L42FCttTtt1010AY.290.000158
ORF1ab/nsp942L42FCttTtt99B0.00115
ORF1ab/nsp942L42FCttTtt99P.10.000142
ORF1ab/nsp942L42FCttTtt88B.1.5260.000188
ORF1ab/nsp942L42FCttTtt77AY.1200.00026
ORF1ab/nsp942L42FCttTtt77AY.450.000852
ORF1ab/nsp942L42FCttTtt66AY.4.20.00013
ORF1ab/nsp942L42FCttTtt66AY.46.60.000433
ORF1ab/nsp942L42FCttTtt66B.1.4270.000303
ORF1ab/nsp942L42FCttTtt66R.10.00054
ORF1ab/nsp942L42FCttTtt55AY.200.000194
ORF1ab/nsp942L42FCttTtt55AY.230.000349
ORF1ab/nsp942L42FCttTtt55AY.3.10.000426
ORF1ab/nsp942L42FCttTtt55AY.5.30.001687
ORF1ab/nsp942L42FCttTtt55B.1.1.330.002104
ORF1ab/nsp942L42FCttTtt55B.1.1.5190.000199
ORF1ab/nsp942L42FCttTtt55B.1.2340.00066
ORF1ab/nsp942L42FCttTtt55B.1.2580.000333
ORF1ab/nsp942L42FCttTtt55B.1.3890.00501
ORF1ab/nsp942L42FCttTtt44AY.1100.000451
ORF1ab/nsp942L42FCttTtt44AY.330.000267
ORF1ab/nsp942L42FCttTtt44AY.4.2.10.000596
ORF1ab/nsp942L42FCttTtt44AY.4.50.00043
ORF1ab/nsp942L42FCttTtt44AY.460.000416
ORF1ab/nsp942L42FCttTtt44AY.46.20.002541
ORF1ab/nsp942L42FCttTtt44AY.620.001743
ORF1ab/nsp942L42FCttTtt44AY.710.0019
ORF1ab/nsp942L42FCttTtt44B.1.1.4090.011331
ORF1ab/nsp942L42FCttTtt44B.1.1.4670.076923
ORF1ab/nsp942L42FCttTtt44C.37.10.010471
ORF1ab/nsp942L42FCttTtt33AY.1140.000693
ORF1ab/nsp942L42FCttTtt33AY.1150.015625
ORF1ab/nsp942L42FCttTtt33AY.1210.000406
ORF1ab/nsp942L42FCttTtt33AY.320.001597
ORF1ab/nsp942L42FCttTtt33AY.880.002653
ORF1ab/nsp942L42FCttTtt33AY.99.20.000276
ORF1ab/nsp942L42FCttTtt33B.1.1.1410.006036
ORF1ab/nsp942L42FCttTtt33B.1.1.2940.003797
ORF1ab/nsp942L42FCttTtt33B.1.177.430.004431
ORF1ab/nsp942L42FCttTtt33B.1.177.570.000843
ORF1ab/nsp942L42FCttTtt33B.1.2210.000213
ORF1ab/nsp942L42FCttTtt33B.1.30.007853
ORF1ab/nsp942L42FCttTtt33B.1.36.10.003421
ORF1ab/nsp942L42FCttTtt33C.370.000348
ORF1ab/nsp942L42FCttTtt33D.20.000225
ORF1ab/nsp942L42FCttTtt33M.30.230769
ORF1ab/nsp942L42FCttTtt22A.2.50.000998
ORF1ab/nsp942L42FCttTtt22AY.1050.001286
ORF1ab/nsp942L42FCttTtt22AY.1060.00067
ORF1ab/nsp942L42FCttTtt22AY.1130.000285
ORF1ab/nsp942L42FCttTtt22AY.1180.000125
ORF1ab/nsp942L42FCttTtt22AY.340.000194
ORF1ab/nsp942L42FCttTtt22AY.39.10.000079
ORF1ab/nsp942L42FCttTtt22AY.5.10.007519
ORF1ab/nsp942L42FCttTtt22AY.5.40.000553
ORF1ab/nsp942L42FCttTtt22AY.60.000082
ORF1ab/nsp942L42FCttTtt22AY.750.000112
ORF1ab/nsp942L42FCttTtt22AY.75.10.000361
ORF1ab/nsp942L42FCttTtt22AY.840.000875
ORF1ab/nsp942L42FCttTtt22AY.9.20.000073
ORF1ab/nsp942L42FCttTtt22AY.910.001461
ORF1ab/nsp942L42FCttTtt22AY.950.001522
ORF1ab/nsp942L42FCttTtt22B.1.1.1340.022727
ORF1ab/nsp942L42FCttTtt22B.1.1.2070.002364
ORF1ab/nsp942L42FCttTtt22B.1.1.2140.000111
ORF1ab/nsp942L42FCttTtt22B.1.1.2220.000408
ORF1ab/nsp942L42FCttTtt22B.1.1.2620.030303
ORF1ab/nsp942L42FCttTtt22B.1.1.3180.000604
ORF1ab/nsp942L42FCttTtt22B.1.1.4340.000697
ORF1ab/nsp942L42FCttTtt22B.1.177.40.000422
ORF1ab/nsp942L42FCttTtt22B.1.177.810.000379
ORF1ab/nsp942L42FCttTtt22B.1.2430.000139
ORF1ab/nsp942L42FCttTtt22B.1.360.000292
ORF1ab/nsp942L42FCttTtt22B.1.36.160.002849
ORF1ab/nsp942L42FCttTtt22B.1.4590.008163
ORF1ab/nsp942L42FCttTtt22B.1.5350.057143
ORF1ab/nsp942L42FCttTtt22B.1.6090.000959
ORF1ab/nsp942L42FCttTtt22B.1.621.10.001012
ORF1ab/nsp942L42FCttTtt22B.30.001661
ORF1ab/nsp942L42FCttTtt22B.60.00182
ORF1ab/nsp942L42FCttTtt22C.230.011628
ORF1ab/nsp942L42FCttTtt22P.1.120.000968
ORF1ab/nsp942L42FCttTtt22P.1.70.000639
ORF1ab/nsp942L42FCttTtt11A0.000387
ORF1ab/nsp942L42FCttTtt11A.20.000662
ORF1ab/nsp942L42FCttTtt11AD.20.000219
ORF1ab/nsp942L42FCttTtt11AY.10.000396
ORF1ab/nsp942L42FCttTtt11AY.1040.001984
ORF1ab/nsp942L42FCttTtt11AY.116.10.000311
ORF1ab/nsp942L42FCttTtt11AY.120.000316
ORF1ab/nsp942L42FCttTtt11AY.120.10.000321
ORF1ab/nsp942L42FCttTtt11AY.130.000161
ORF1ab/nsp942L42FCttTtt11AY.16.10.00047
ORF1ab/nsp942L42FCttTtt11AY.190.00114
ORF1ab/nsp942L42FCttTtt11AY.220.002092
ORF1ab/nsp942L42FCttTtt11AY.270.000065
ORF1ab/nsp942L42FCttTtt11AY.34.10.00051
ORF1ab/nsp942L42FCttTtt11AY.380.000499
ORF1ab/nsp942L42FCttTtt11AY.4.10.000737
ORF1ab/nsp942L42FCttTtt11AY.4.40.000409
ORF1ab/nsp942L42FCttTtt11AY.46.50.000198
ORF1ab/nsp942L42FCttTtt11AY.510.000909
ORF1ab/nsp942L42FCttTtt11AY.540.000095
ORF1ab/nsp942L42FCttTtt11AY.550.000917
ORF1ab/nsp942L42FCttTtt11AY.560.001605
ORF1ab/nsp942L42FCttTtt11AY.580.000907
ORF1ab/nsp942L42FCttTtt11AY.600.000938
ORF1ab/nsp942L42FCttTtt11AY.670.000464
ORF1ab/nsp942L42FCttTtt11AY.680.000274
ORF1ab/nsp942L42FCttTtt11AY.720.001361
ORF1ab/nsp942L42FCttTtt11AY.800.001129
ORF1ab/nsp942L42FCttTtt11AY.870.000833
ORF1ab/nsp942L42FCttTtt11AY.90.000068
ORF1ab/nsp942L42FCttTtt11AY.9.10.000084
ORF1ab/nsp942L42FCttTtt11AY.930.000273
ORF1ab/nsp942L42FCttTtt11AY.960.002075
ORF1ab/nsp942L42FCttTtt11B.1.1.1090.04
ORF1ab/nsp942L42FCttTtt11B.1.1.1720.018182
ORF1ab/nsp942L42FCttTtt11B.1.1.250.000569
ORF1ab/nsp942L42FCttTtt11B.1.1.2690.001353
ORF1ab/nsp942L42FCttTtt11B.1.1.2770.000759
ORF1ab/nsp942L42FCttTtt11B.1.1.2910.000742
ORF1ab/nsp942L42FCttTtt11B.1.1.3040.002809
ORF1ab/nsp942L42FCttTtt11B.1.1.3060.000438
ORF1ab/nsp942L42FCttTtt11B.1.1.3160.000925
ORF1ab/nsp942L42FCttTtt11B.1.1.3170.000412
ORF1ab/nsp942L42FCttTtt11B.1.1.3880.045455
ORF1ab/nsp942L42FCttTtt11B.1.1.390.00051
ORF1ab/nsp942L42FCttTtt11B.1.1.3980.003226
ORF1ab/nsp942L42FCttTtt11B.1.1.4160.000905
ORF1ab/nsp942L42FCttTtt11B.1.1.560.017857
ORF1ab/nsp942L42FCttTtt11B.1.1.630.000386
ORF1ab/nsp942L42FCttTtt11B.1.1.890.006061
ORF1ab/nsp942L42FCttTtt11B.1.160.160.000929
ORF1ab/nsp942L42FCttTtt11B.1.177.210.000076
ORF1ab/nsp942L42FCttTtt11B.1.177.320.00135
ORF1ab/nsp942L42FCttTtt11B.1.177.420.000894
ORF1ab/nsp942L42FCttTtt11B.1.177.530.002392
ORF1ab/nsp942L42FCttTtt11B.1.177.60.000977
ORF1ab/nsp942L42FCttTtt11B.1.177.600.000218
ORF1ab/nsp942L42FCttTtt11B.1.177.70.000165
ORF1ab/nsp942L42FCttTtt11B.1.177.760.002494
ORF1ab/nsp942L42FCttTtt11B.1.2010.005682
ORF1ab/nsp942L42FCttTtt11B.1.2060.000816
ORF1ab/nsp942L42FCttTtt11B.1.2360.002053
ORF1ab/nsp942L42FCttTtt11B.1.258.170.000104
ORF1ab/nsp942L42FCttTtt11B.1.2790.000514
ORF1ab/nsp942L42FCttTtt11B.1.3240.001605
ORF1ab/nsp942L42FCttTtt11B.1.3320.003497
ORF1ab/nsp942L42FCttTtt11B.1.3410.022727
ORF1ab/nsp942L42FCttTtt11B.1.36.100.004785
ORF1ab/nsp942L42FCttTtt11B.1.36.330.007576
ORF1ab/nsp942L42FCttTtt11B.1.36.380.001642
ORF1ab/nsp942L42FCttTtt11B.1.3750.00082
ORF1ab/nsp942L42FCttTtt11B.1.4200.010417
ORF1ab/nsp942L42FCttTtt11B.1.4290.000024
ORF1ab/nsp942L42FCttTtt11B.1.4360.001029
ORF1ab/nsp942L42FCttTtt11B.1.438.10.000107
ORF1ab/nsp942L42FCttTtt11B.1.4850.014925
ORF1ab/nsp942L42FCttTtt11B.1.5240.001406
ORF1ab/nsp942L42FCttTtt11B.1.5300.007143
ORF1ab/nsp942L42FCttTtt11B.1.5600.00463
ORF1ab/nsp942L42FCttTtt11B.1.5820.000491
ORF1ab/nsp942L42FCttTtt11B.1.5880.00091
ORF1ab/nsp942L42FCttTtt11B.1.5950.000261
ORF1ab/nsp942L42FCttTtt11B.1.930.000934
ORF1ab/nsp942L42FCttTtt11B.400.000364
ORF1ab/nsp942L42FCttTtt11C.36.30.000567