CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp9 | 101 | M101I | M4241I | nonsyn | atG | atT | 26929 | 26705 | 0.991682 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101I | M4241I | nonsyn | atG | atA | 26929 | 195 | 0.00724126 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101I | M4241I | nonsyn | atG | atC | 26929 | 29 | 0.00107691 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101V | M4241V | nonsyn | Atg | Gtg | 1003 | 996 | 0.993021 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101V | M4241V | nonsyn | AtG | GtT | 1003 | 7 | 0.00697906 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101T | M4241T | nonsyn | aTg | aCg | 430 | 430 | 1 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101L | M4241L | nonsyn | Atg | Ttg | 118 | 116 | 0.983051 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101L | M4241L | nonsyn | Atg | Ctg | 118 | 2 | 0.0169492 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101del | M4241del | del | ATG | --- | 42 | 42 | 1 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101K | M4241K | nonsyn | aTg | aAg | 36 | 36 | 1 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101R | M4241R | nonsyn | aTg | aGg | 5 | 5 | 1 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101del1 | M4241del1 | del | atG | at- | 3 | 2 | 0.666667 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101del1 | M4241del1 | del | AtG | -tC | 3 | 1 | 0.333333 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101del2 | M4241del2 | del | aTG | a-- | 1 | 1 | 1 | 12986-12988 |
ORF1ab/nsp9 | 101 | M101N | M4241N | nonsyn | aTG | aAC | 1 | 1 | 1 | 12986-12988 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 26705 | 26929 | All | 0.005108 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 195 | 26929 | All | 0.000037 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 29 | 26929 | All | 0.000006 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 10363 | 10363 | B.1.258 | 0.689625 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 9588 | 9588 | B.1.258.17 | 0.996881 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2437 | 2437 | B.1.258.11 | 0.965914 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 996 | 1003 | All | 0.00019 |
ORF1ab/nsp9 | 101 | M101V | AtG | GtT | 7 | 1003 | All | 0.000001 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 523 | 523 | B.1.258.7 | 1 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 430 | 430 | All | 0.000082 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 418 | 418 | AY.4.1 | 0.30826 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 373 | 373 | B.1.258.22 | 0.994667 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 329 | 330 | B.1.561 | 0.130607 |
ORF1ab/nsp9 | 101 | M101V | AtG | GtT | 1 | 330 | B.1.561 | 0.000397 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 284 | 292 | B.1 | 0.002601 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 7 | 292 | B.1 | 0.000064 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 292 | B.1 | 0.000009 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 289 | 289 | B.1.258.4 | 0.996552 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 285 | 285 | AY.26 | 0.008068 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 232 | 232 | B.1.526 | 0.005453 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 164 | 222 | B.1.1.7 | 0.000147 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 55 | 222 | B.1.1.7 | 0.000049 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 3 | 222 | B.1.1.7 | 0.000003 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 200 | 204 | AY.25 | 0.001203 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 4 | 204 | AY.25 | 0.000024 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 196 | 196 | B.1.258.9 | 0.98 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 188 | 188 | AY.4 | 0.000293 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 139 | 139 | B.1.258.19 | 0.985816 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 113 | 128 | AY.4 | 0.000176 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 9 | 128 | AY.4 | 0.000014 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 6 | 128 | AY.4 | 0.000009 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 127 | 127 | B.1.258.21 | 0.984496 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 125 | 125 | B.1.258.12 | 0.984252 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 116 | 118 | All | 0.000022 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ctg | 2 | 118 | All | 0 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 114 | 114 | B.1.258.5 | 1 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 90 | 90 | B.1.1.7 | 0.000081 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 87 | 87 | B.1.258.10 | 0.988636 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 62 | 69 | AY.44 | 0.000377 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 7 | 69 | AY.44 | 0.000043 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 63 | 63 | B.1.258.20 | 1 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 35 | 57 | B.1.2 | 0.000308 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 22 | 57 | B.1.2 | 0.000194 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 56 | 56 | AY.44 | 0.000341 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 51 | 51 | B.1.258.6 | 1 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 49 | 49 | B.1.429 | 0.001153 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 44 | 48 | B.1.1 | 0.000798 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 2 | 48 | B.1.1 | 0.000036 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 48 | B.1.1 | 0.000036 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 42 | 42 | All | 0.000008 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 42 | 42 | B.1.258.23 | 1 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 41 | 41 | AY.9.1 | 0.003433 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 37 | 40 | B.1.617.2 | 0.000139 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 3 | 40 | B.1.617.2 | 0.000011 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 37 | 37 | B.1.617.2 | 0.000139 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 36 | 36 | All | 0.000007 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 32 | 34 | B.1.177 | 0.000421 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 34 | B.1.177 | 0.000013 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 34 | B.1.177 | 0.000013 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 31 | 31 | AY.4 | 0.000048 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 31 | 31 | B.1.258.24 | 0.333333 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 15 | 29 | AY.103 | 0.000093 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 14 | 29 | AY.103 | 0.000087 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 28 | 28 | AY.3 | 0.000278 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 28 | 28 | B.1.609 | 0.013423 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 27 | 27 | AY.47 | 0.00084 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 27 | 27 | B.1.160 | 0.000842 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 25 | 25 | AY.103 | 0.000155 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 22 | 25 | AY.3 | 0.000219 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 2 | 25 | AY.3 | 0.00002 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 25 | AY.3 | 0.00001 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 24 | 24 | AY.1 | 0.009497 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 23 | 23 | AY.4.5 | 0.002472 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 23 | 23 | B.1.351 | 0.000684 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 22 | 22 | R.1 | 0.00198 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 21 | 21 | B.1.1.7 | 0.000019 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 18 | 18 | AY.43 | 0.00008 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 17 | 17 | AY.4.5 | 0.001827 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 16 | 16 | AY.25 | 0.000096 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 15 | 15 | AY.43 | 0.000066 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 10 | 15 | P.1 | 0.000158 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 5 | 15 | P.1 | 0.000079 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 13 | 14 | B.1.221 | 0.000923 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 14 | B.1.221 | 0.000071 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 14 | 14 | C.16 | 0.014846 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 14 | 14 | Q.1 | 0.001769 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 13 | 13 | B.1.258.14 | 0.012745 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 13 | 13 | B.1.367 | 0.010301 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 12 | 12 | AY.34 | 0.001164 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 12 | 12 | AY.4.2 | 0.00026 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 11 | 11 | A.5 | 0.021154 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 11 | 11 | B.1 | 0.000101 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 11 | 11 | B.1.1.214 | 0.00061 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 11 | 11 | B.1.1.519 | 0.000437 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 10 | 11 | B.1.1.7 | 0.000009 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ctg | 1 | 11 | B.1.1.7 | 0.000001 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 11 | 11 | B.1.2 | 0.000097 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 10 | 10 | B.1.258.18 | 1 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 9 | 9 | A | 0.003483 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 8 | 9 | AY.39 | 0.000198 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 9 | AY.39 | 0.000025 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 9 | 9 | AY.4.2 | 0.000195 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 6 | 8 | AY.20 | 0.000233 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 8 | AY.20 | 0.000078 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 8 | 8 | AY.39 | 0.000198 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 7 | 8 | B.1.1.222 | 0.001428 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 8 | B.1.1.222 | 0.000204 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 5 | 8 | B.1.637 | 0.000365 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 8 | B.1.637 | 0.000219 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 6 | 7 | AY.102 | 0.000159 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 7 | AY.102 | 0.000027 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 5 | 7 | AY.42 | 0.000201 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 7 | AY.42 | 0.00008 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 7 | 7 | AY.74 | 0.00081 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 7 | 7 | B.1.526 | 0.000165 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 7 | 7 | B.4.1 | 0.132075 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 6 | 6 | AY.111 | 0.001099 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 6 | 6 | AY.118 | 0.000376 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 6 | 6 | B.1.177.86 | 0.001101 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 6 | 6 | B.1.625 | 0.014118 |
ORF1ab/nsp9 | 101 | M101R | aTg | aGg | 5 | 5 | All | 0.000001 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 5 | 5 | AY.109 | 0.003698 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 5 | 5 | B.1.177.73 | 0.002831 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 5 | 5 | B.1.375 | 0.004098 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 5 | 5 | B.1.411 | 0.018519 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 5 | 5 | B.29 | 0.017544 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 4 | 4 | AY.13 | 0.000644 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 4 | 4 | AY.26 | 0.000113 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 4 | 4 | AY.32 | 0.00213 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 4 | 4 | AY.34 | 0.000388 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 4 | 4 | AY.8 | 0.002424 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B | 0.000511 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp9 | 101 | M101R | aTg | aGg | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B.1.222 | 0.006768 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B.1.600 | 0.023392 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 4 | 4 | B.1.634 | 0.013699 |
ORF1ab/nsp9 | 101 | M101del1 | atG | at- | 2 | 3 | All | 0 |
ORF1ab/nsp9 | 101 | M101del1 | AtG | -tC | 1 | 3 | All | 0 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | AY.120 | 0.000112 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 3 | 3 | AY.37 | 0.000948 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | AY.78 | 0.004622 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | B.1.1.198 | 0.004405 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 3 | B.1.1.214 | 0.000111 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 3 | B.1.1.214 | 0.000055 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 3 | B.1.1.354 | 0.008772 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 3 | B.1.1.354 | 0.004386 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | B.1.177.6 | 0.00293 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | B.1.241 | 0.002435 |
ORF1ab/nsp9 | 101 | M101V | AtG | GtT | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | B.1.258.15 | 0.056604 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 3 | B.1.617.1 | 0.000258 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 3 | B.1.617.1 | 0.000129 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 3 | D.2 | 0.00015 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 3 | D.2 | 0.000075 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.1.153 | 0.002191 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 2 | B.1.177.60 | 0.000218 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | B.1.177.60 | 0.000218 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | B.1.177.8 | 0.000752 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 2 | B.1.177.8 | 0.000752 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 2 | B.1.237 | 0.004975 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 2 | B.1.237 | 0.004975 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.395 | 0.014085 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | B.31 | 0.007463 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp9 | 101 | M101V | AtG | GtT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | 0.055556 | |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp9 | 101 | M101del2 | aTG | a-- | 1 | 1 | All | 0 |
ORF1ab/nsp9 | 101 | M101N | aTG | aAC | 1 | 1 | All | 0 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ctg | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp9 | 101 | M101del1 | AtG | -tC | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp9 | 101 | M101N | aTG | aAC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.350 | 0.04 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp9 | 101 | M101del2 | aTG | a-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp9 | 101 | M101del1 | atG | at- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.177.28 | 0.007407 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.177.84 | 0.006667 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp9 | 101 | M101V | AtG | GtT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp9 | 101 | M101R | aTg | aGg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.432 | 0.011236 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.473 | 0.019231 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp9 | 101 | M101L | Atg | Ttg | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp9 | 101 | M101del1 | atG | at- | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | B.34 | 0.013699 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp9 | 101 | M101K | aTg | aAg | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp9 | 101 | M101del | ATG | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp9 | 101 | M101T | aTg | aCg | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp9 | 101 | M101I | atG | atA | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp9 | 101 | M101I | atG | atT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp9 | 101 | M101I | atG | atC | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp9 | 101 | M101V | Atg | Gtg | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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