CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp8 | 148 | T148I | T4090I | nonsyn | aCt | aTt | 10123 | 10123 | 1 | 12533-12535 |
Details of the mutation T148I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 10123 | 10123 | All | 0.001936 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1699 | 1699 | C.36.3 | 0.963698 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1662 | 1662 | B.1.1.7 | 0.001488 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1001 | 1001 | AY.4 | 0.001558 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 843 | 843 | C.36 | 0.76776 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 754 | 754 | AY.39 | 0.018632 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 448 | 448 | AY.101 | 0.219716 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 329 | 329 | C.36.3.1 | 0.894022 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 289 | 289 | B.1.617.2 | 0.001088 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 241 | 241 | C.36.1 | 1 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 147 | 147 | B.1.313 | 0.967105 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 135 | 135 | B.1.621 | 0.01195 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 120 | 120 | B.1 | 0.001099 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 101 | 101 | B.1.177 | 0.00133 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 89 | 89 | AY.100 | 0.004095 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 82 | 82 | AY.5 | 0.001693 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 81 | 81 | AY.103 | 0.000503 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 80 | 80 | B.1.429 | 0.001882 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 73 | 73 | B.1.2 | 0.000643 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 71 | 71 | B.1.240 | 0.015305 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 66 | 66 | AY.3 | 0.000656 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 66 | 66 | AY.44 | 0.000402 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 58 | 58 | B.1.1 | 0.001052 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 57 | 57 | AY.43 | 0.000253 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 55 | 55 | AY.120.1 | 0.017657 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 55 | 55 | AY.25 | 0.000331 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 51 | 51 | P.1 | 0.000803 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 50 | 50 | B.1.1.222 | 0.0102 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 49 | 49 | B.1.526 | 0.001152 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 48 | 48 | B.28 | 0.157377 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 44 | 44 | AY.26 | 0.001246 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 40 | 40 | B.1.36 | 0.005836 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 37 | 37 | AY.116 | 0.010611 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 37 | 37 | B.1.311 | 0.010159 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 29 | 29 | C.36.2 | 1 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 28 | 28 | AY.102 | 0.000742 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 26 | 26 | B.1.521 | 0.129353 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 25 | 25 | AY.46 | 0.002602 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 25 | 25 | B.1.265 | 0.031766 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 24 | 24 | AY.99.2 | 0.002212 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 24 | 24 | B | 0.003067 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 23 | 23 | AY.111 | 0.004212 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 23 | 23 | B.1.1.242 | 1 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 23 | 23 | B.1.1.378 | 0.167883 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 23 | 23 | B.1.177.53 | 0.055024 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 21 | 21 | A.2.5 | 0.010479 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 21 | 21 | AY.119 | 0.000741 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 20 | 20 | AY.34 | 0.001939 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 19 | 19 | AY.118 | 0.00119 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 17 | 17 | AY.4.2 | 0.000369 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 17 | 17 | B.1.206 | 0.013866 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 17 | 17 | B.1.351 | 0.000505 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 16 | 16 | AY.106 | 0.005358 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 16 | 16 | B.1.177.81 | 0.003029 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 16 | 16 | B.1.627 | 0.032323 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 15 | 15 | AY.6 | 0.000617 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 15 | 15 | C.17 | 0.833333 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 15 | 15 | R.1 | 0.00135 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 14 | 14 | AY.121 | 0.001894 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 14 | 14 | B.1.258 | 0.000932 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 13 | 13 | AY.47 | 0.000404 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 13 | 13 | B.1.243 | 0.000905 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 12 | 12 | AY.42 | 0.000483 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | AY.54 | 0.001049 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | B.1.1.1 | 0.003594 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | B.1.1.519 | 0.000437 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 11 | 11 | B.1.427 | 0.000555 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 10 | 10 | B.1.1.176 | 0.004394 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 9 | 9 | AY.36 | 0.001334 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 9 | 9 | B.1.1.294 | 0.011392 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 9 | 9 | Q.3 | 0.001305 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 8 | 8 | AY.14 | 0.000704 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 8 | 8 | B.1.234 | 0.001056 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 8 | 8 | B.1.525 | 0.000905 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | AY.29 | 0.00011 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.1.414 | 1 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.160 | 0.000218 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.177.7 | 0.001154 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.177.83 | 0.01037 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | B.1.258.3 | 0.011725 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | P.7 | 0.030568 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 7 | 7 | Q.8 | 0.001154 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | AY.24 | 0.002586 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | AY.29.1 | 0.001323 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | AY.39.1 | 0.000238 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | B.1.1.434 | 0.002091 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | B.1.470 | 0.008427 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | B.1.546 | 0.022222 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | B.1.595 | 0.001566 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 6 | 6 | C.39 | 0.113208 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | AY.46.4 | 0.000823 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | AY.9.2 | 0.000184 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | AY.95 | 0.003805 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | B.1.1.317 | 0.002058 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 5 | 5 | B.1.23 | 0.030303 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.41 | 0.001176 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.74 | 0.000463 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | B.1.351.2 | 0.00121 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | B.1.575 | 0.001214 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | B.1.577 | 0.002749 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | P.1.7 | 0.001277 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.2 | 0.001068 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | AY.90 | 0.002053 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.1.174 | 0.010135 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.1.232 | 0.005445 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.177.11 | 0.005093 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.239 | 0.003663 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.411 | 0.011111 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | A | 0.000774 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.46.3 | 0.001867 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.153 | 0.002191 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.285 | 0.013072 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.380 | 0.019608 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.420 | 0.002012 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.523 | 0.003125 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.62 | 0.054054 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.167 | 0.015625 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.170 | 0.008621 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.214 | 0.007326 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.258.7 | 0.003824 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.351.3 | 0.001753 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.540 | 0.019417 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.591 | 0.021277 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | B.1.81 | 0.042553 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.217 | 0.003636 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.280 | 0.003086 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.31 | 0.066667 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.332 | 0.03125 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.390 | 0.010638 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.605 | 0.005952 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp8 | 148 | T148I | aCt | aTt | 1 | 1 | W.3 | 0.005263 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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