CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = S4del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp84S4del1S3946del1delTca-ca420.512101-12103
ORF1ab/nsp84S4del1S3946del1deltcAtc-420.512101-12103

Details of the mutation S4del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp84S4del1Tca-ca24All0
ORF1ab/nsp84S4del1tcAtc-24All0
ORF1ab/nsp84S4del1Tca-ca11AY.250.000006
ORF1ab/nsp84S4del1tcAtc-11B.10.000009
ORF1ab/nsp84S4del1Tca-ca11B.1.5950.000261
ORF1ab/nsp84S4del1tcAtc-11B.1.617.10.000129