CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = S4T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp84S4TS3946TnonsynTcaAca1161150.99137912101-12103
ORF1ab/nsp84S4TS3946TnonsynTcAAcC11610.0086206912101-12103

Details of the mutation S4T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp84S4TTcaAca115116All0.000022
ORF1ab/nsp84S4TTcAAcC1116All0
ORF1ab/nsp84S4TTcaAca7676B.1.36.380.124795
ORF1ab/nsp84S4TTcaAca1010B.1.1.70.000009
ORF1ab/nsp84S4TTcaAca77AY.40.000011
ORF1ab/nsp84S4TTcaAca33AY.120.2.10.001495
ORF1ab/nsp84S4TTcaAca33AY.430.000013
ORF1ab/nsp84S4TTcaAca33B.1.1770.00004
ORF1ab/nsp84S4TTcaAca120.055556
ORF1ab/nsp84S4TTcAAcC120.055556
ORF1ab/nsp84S4TTcaAca22AY.440.000012
ORF1ab/nsp84S4TTcaAca22B.1.617.20.000008
ORF1ab/nsp84S4TTcaAca11AY.1000.000046
ORF1ab/nsp84S4TTcaAca11AY.1200.000037
ORF1ab/nsp84S4TTcaAca11AY.30.00001
ORF1ab/nsp84S4TTcaAca11AY.550.000917
ORF1ab/nsp84S4TTcaAca11B.10.000009
ORF1ab/nsp84S4TTcaAca11B.1.10.000018
ORF1ab/nsp84S4TTcaAca11B.1.177.570.000281
ORF1ab/nsp84S4TTcaAca11P.1.120.000484