CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = R51L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp851R51LR3993LnonsyncGtcTt117211320.9658712242-12244
ORF1ab/nsp851R51LR3993LnonsynCGTTTA1172330.02815712242-12244
ORF1ab/nsp851R51LR3993LnonsynCGTTTG117270.005972712242-12244

Details of the mutation R51L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp851R51LcGtcTt11321172All0.000217
ORF1ab/nsp851R51LCGTTTA331172All0.000006
ORF1ab/nsp851R51LCGTTTG71172All0.000001
ORF1ab/nsp851R51LcGtcTt403403B.1.1770.005307
ORF1ab/nsp851R51LcGtcTt248248B.1.20.002184
ORF1ab/nsp851R51LcGtcTt125125B.1.160.110.714286
ORF1ab/nsp851R51LcGtcTt3572B.1.1.70.000031
ORF1ab/nsp851R51LCGTTTA3072B.1.1.70.000027
ORF1ab/nsp851R51LCGTTTG772B.1.1.70.000006
ORF1ab/nsp851R51LcGtcTt3838B.1.10.000689
ORF1ab/nsp851R51LcGtcTt2425B.10.00022
ORF1ab/nsp851R51LCGTTTA125B.10.000009
ORF1ab/nsp851R51LcGtcTt2020B.1.5600.092593
ORF1ab/nsp851R51LcGtcTt1919B.1.3460.024902
ORF1ab/nsp851R51LcGtcTt1819B.1.5760.016319
ORF1ab/nsp851R51LCGTTTA119B.1.5760.000907
ORF1ab/nsp851R51LcGtcTt1818B.1.4290.000424
ORF1ab/nsp851R51LcGtcTt1717B.1.617.20.000064
ORF1ab/nsp851R51LcGtcTt1515B.1.36.210.032397
ORF1ab/nsp851R51LcGtcTt1212B.1.5650.009724
ORF1ab/nsp851R51LcGtcTt99AY.430.00004
ORF1ab/nsp851R51LcGtcTt99B.1.177.830.013333
ORF1ab/nsp851R51LcGtcTt99B.1.177.90.011984
ORF1ab/nsp851R51LcGtcTt77B.1.1600.000218
ORF1ab/nsp851R51LcGtcTt77B.1.2410.005682
ORF1ab/nsp851R51LcGtcTt77B.1.360.001021
ORF1ab/nsp851R51LcGtcTt66B0.000767
ORF1ab/nsp851R51LcGtcTt66B.1.1110.007051
ORF1ab/nsp851R51LcGtcTt66B.1.1950.030151
ORF1ab/nsp851R51LcGtcTt44AY.40.000006
ORF1ab/nsp851R51LcGtcTt44B.1.1.2070.004728
ORF1ab/nsp851R51LcGtcTt44B.1.1.2160.003562
ORF1ab/nsp851R51LcGtcTt44B.1.177.70.000659
ORF1ab/nsp851R51LcGtcTt33A.20.001985
ORF1ab/nsp851R51LcGtcTt33AY.90.000203
ORF1ab/nsp851R51LcGtcTt33AY.9.20.00011
ORF1ab/nsp851R51LcGtcTt33B.1.2650.003812
ORF1ab/nsp851R51LcGtcTt33B.1.5960.000261
ORF1ab/nsp851R51LcGtcTt12AY.250.000006
ORF1ab/nsp851R51LCGTTTA12AY.250.000006
ORF1ab/nsp851R51LcGtcTt22AY.290.000032
ORF1ab/nsp851R51LcGtcTt22AY.30.00002
ORF1ab/nsp851R51LcGtcTt22AY.470.000062
ORF1ab/nsp851R51LcGtcTt22B.1.1.5190.000079
ORF1ab/nsp851R51LcGtcTt22B.1.3710.002245
ORF1ab/nsp851R51LcGtcTt22B.1.438.10.000215
ORF1ab/nsp851R51LcGtcTt11AY.1030.000006
ORF1ab/nsp851R51LcGtcTt11AY.1190.000035
ORF1ab/nsp851R51LcGtcTt11AY.120.10.000321
ORF1ab/nsp851R51LcGtcTt11AY.270.000065
ORF1ab/nsp851R51LcGtcTt11AY.4.20.000022
ORF1ab/nsp851R51LcGtcTt11AY.420.00004
ORF1ab/nsp851R51LcGtcTt11AY.99.20.000092
ORF1ab/nsp851R51LcGtcTt11B.1.1.250.000569
ORF1ab/nsp851R51LcGtcTt11B.1.1.280.000311
ORF1ab/nsp851R51LcGtcTt11B.1.1.3110.000358
ORF1ab/nsp851R51LcGtcTt11B.1.1.3160.000925
ORF1ab/nsp851R51LcGtcTt11B.1.1.440.00241
ORF1ab/nsp851R51LcGtcTt11B.1.1.4860.001577
ORF1ab/nsp851R51LcGtcTt11B.1.1390.000733
ORF1ab/nsp851R51LcGtcTt11B.1.177.550.002331
ORF1ab/nsp851R51LcGtcTt11B.1.177.560.000668
ORF1ab/nsp851R51LcGtcTt11B.1.177.650.000665
ORF1ab/nsp851R51LcGtcTt11B.1.177.730.000566
ORF1ab/nsp851R51LcGtcTt11B.1.177.80.000752
ORF1ab/nsp851R51LcGtcTt11B.1.177.870.000728
ORF1ab/nsp851R51LcGtcTt11B.1.2210.000071
ORF1ab/nsp851R51LcGtcTt11B.1.2360.002053
ORF1ab/nsp851R51LcGtcTt11B.1.2400.000216
ORF1ab/nsp851R51LcGtcTt11B.1.2580.000067
ORF1ab/nsp851R51LcGtcTt11B.1.2790.000514
ORF1ab/nsp851R51LcGtcTt11B.1.5640.000426
ORF1ab/nsp851R51LcGtcTt11B.1.5950.000261
ORF1ab/nsp851R51LcGtcTt11B.1.6210.000089
ORF1ab/nsp851R51LcGtcTt11B.4.50.011905
ORF1ab/nsp851R51LcGtcTt11D.20.000075