CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = P10L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp810P10LP3952LnonsyncCacTa3333260.97897912119-12121
ORF1ab/nsp810P10LP3952LnonsynCCaTTa33340.01201212119-12121
ORF1ab/nsp810P10LP3952LnonsyncCAcTG33320.0060060112119-12121
ORF1ab/nsp810P10LP3952LnonsyncCAcTT33310.00300312119-12121

Details of the mutation P10L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp810P10LcCacTa326333All0.000062
ORF1ab/nsp810P10LCCaTTa4333All0.000001
ORF1ab/nsp810P10LcCAcTG2333All0
ORF1ab/nsp810P10LcCAcTT1333All0
ORF1ab/nsp810P10LcCacTa6161AY.1190.002154
ORF1ab/nsp810P10LcCacTa4040B.1.1.70.000036
ORF1ab/nsp810P10LcCacTa3838AY.40.000059
ORF1ab/nsp810P10LcCacTa1818B.1.617.20.000068
ORF1ab/nsp810P10LcCacTa1111B.10.000101
ORF1ab/nsp810P10LcCacTa1111B.1.1.4320.013924
ORF1ab/nsp810P10LcCacTa1010AY.250.00006
ORF1ab/nsp810P10LcCacTa99AY.60.00037
ORF1ab/nsp810P10LcCacTa88AY.1000.000368
ORF1ab/nsp810P10LcCacTa88AY.430.000035
ORF1ab/nsp810P10LcCacTa88AY.440.000049
ORF1ab/nsp810P10LcCacTa88B.1.4290.000188
ORF1ab/nsp810P10LcCacTa77AY.1030.000043
ORF1ab/nsp810P10LcCacTa77AY.4.20.000152
ORF1ab/nsp810P10LcCacTa77B.1.1.2220.001428
ORF1ab/nsp810P10LcCacTa66B.1.1600.000187
ORF1ab/nsp810P10LcCacTa66B.1.1770.000079
ORF1ab/nsp810P10LcCacTa55AY.30.00005
ORF1ab/nsp810P10LcCacTa44AY.1130.00057
ORF1ab/nsp810P10LcCacTa44AY.200.000155
ORF1ab/nsp810P10LcCacTa44B.1.3600.050633
ORF1ab/nsp810P10LcCacTa130.055556
ORF1ab/nsp810P10LCCaTTa130.055556
ORF1ab/nsp810P10LcCAcTT130.055556
ORF1ab/nsp810P10LCCaTTa33B.1.177.810.000568
ORF1ab/nsp810P10LcCacTa22AY.450.000243
ORF1ab/nsp810P10LcCacTa22AY.750.000112
ORF1ab/nsp810P10LcCacTa22B.1.1.2200.003717
ORF1ab/nsp810P10LcCacTa22B.1.1.2840.000215
ORF1ab/nsp810P10LcCacTa22B.1.20.000018
ORF1ab/nsp810P10LcCacTa22B.1.2210.000142
ORF1ab/nsp810P10LcCacTa22B.1.4270.000101
ORF1ab/nsp810P10LcCAcTG22B.1.438.10.000215
ORF1ab/nsp810P10LcCacTa22P.1.140.000096
ORF1ab/nsp810P10LcCacTa11A.23.10.000704
ORF1ab/nsp810P10LcCacTa11AY.1180.000063
ORF1ab/nsp810P10LcCacTa11AY.230.00007
ORF1ab/nsp810P10LcCacTa11AY.270.000065
ORF1ab/nsp810P10LcCacTa11AY.330.000067
ORF1ab/nsp810P10LcCacTa11AY.360.000148
ORF1ab/nsp810P10LcCacTa11AY.420.00004
ORF1ab/nsp810P10LcCacTa11AY.46.40.000165
ORF1ab/nsp810P10LcCacTa11AY.470.000031
ORF1ab/nsp810P10LcCacTa11AY.5.30.000337
ORF1ab/nsp810P10LcCacTa11AY.690.000187
ORF1ab/nsp810P10LcCacTa11AY.98.10.000048
ORF1ab/nsp810P10LcCacTa11B.1.1.2070.001182
ORF1ab/nsp810P10LcCacTa11B.1.1.2160.00089
ORF1ab/nsp810P10LcCacTa11B.1.1.2770.000759
ORF1ab/nsp810P10LcCacTa11B.1.1.370.000193
ORF1ab/nsp810P10LcCacTa11B.1.1670.007812
ORF1ab/nsp810P10LcCacTa11B.1.177.40.000211
ORF1ab/nsp810P10LcCacTa11B.1.2340.000132
ORF1ab/nsp810P10LcCacTa11B.1.2580.000067
ORF1ab/nsp810P10LcCacTa11B.1.3510.00003
ORF1ab/nsp810P10LcCacTa11B.1.3540.043478
ORF1ab/nsp810P10LcCacTa11B.1.3670.000792
ORF1ab/nsp810P10LcCacTa11B.1.575.10.002439
ORF1ab/nsp810P10LcCacTa11B.1.5960.000087
ORF1ab/nsp810P10LcCacTa11C.36.30.000567
ORF1ab/nsp810P10LcCacTa11P.10.000016
ORF1ab/nsp810P10LcCacTa11P.1.150.000232
ORF1ab/nsp810P10LcCacTa11R.10.00009