CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = L9F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp89L9FL3951FnonsynCttTtt18081808112116-12118

Details of the mutation L9F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp89L9FCttTtt18081808All0.000346
ORF1ab/nsp89L9FCttTtt505505B.1.1.70.000452
ORF1ab/nsp89L9FCttTtt157157D.20.011781
ORF1ab/nsp89L9FCttTtt126126B.1.3510.003746
ORF1ab/nsp89L9FCttTtt111111B.1.3460.145478
ORF1ab/nsp89L9FCttTtt103103B.1.1.700.03513
ORF1ab/nsp89L9FCttTtt7272B.1.1770.000948
ORF1ab/nsp89L9FCttTtt6868B.1.20.000599
ORF1ab/nsp89L9FCttTtt6161B.1.5260.001434
ORF1ab/nsp89L9FCttTtt5959B.1.10.00107
ORF1ab/nsp89L9FCttTtt4848AN.10.96
ORF1ab/nsp89L9FCttTtt3030B.10.000275
ORF1ab/nsp89L9FCttTtt2323P.10.000362
ORF1ab/nsp89L9FCttTtt2020N.50.035336
ORF1ab/nsp89L9FCttTtt1919B.1.1.2140.001054
ORF1ab/nsp89L9FCttTtt1717B.1.2210.001208
ORF1ab/nsp89L9FCttTtt1616B.1.4290.000376
ORF1ab/nsp89L9FCttTtt1515B.1.177.200.022762
ORF1ab/nsp89L9FCttTtt1414B.1.360.002043
ORF1ab/nsp89L9FCttTtt1414B.1.3690.003993
ORF1ab/nsp89L9FCttTtt1212AY.40.000019
ORF1ab/nsp89L9FCttTtt1111B.1.1.3020.022822
ORF1ab/nsp89L9FCttTtt1010B.1.5960.000871
ORF1ab/nsp89L9FCttTtt99AY.430.00004
ORF1ab/nsp89L9FCttTtt99B.1.1600.000281
ORF1ab/nsp89L9FCttTtt99B.1.177.70.001484
ORF1ab/nsp89L9FCttTtt99B.1.221.30.0075
ORF1ab/nsp89L9FCttTtt88B.1.36.80.008
ORF1ab/nsp89L9FCttTtt88B.1.617.20.00003
ORF1ab/nsp89L9FCttTtt77AY.9.20.000257
ORF1ab/nsp89L9FCttTtt77B0.000895
ORF1ab/nsp89L9FCttTtt77B.1.1.2840.000752
ORF1ab/nsp89L9FCttTtt77B.1.258.170.000728
ORF1ab/nsp89L9FCttTtt77B.1.4270.000353
ORF1ab/nsp89L9FCttTtt77B.1.5250.000792
ORF1ab/nsp89L9FCttTtt66B.1.1.5190.000238
ORF1ab/nsp89L9FCttTtt55AY.250.00003
ORF1ab/nsp89L9FCttTtt55AY.670.002321
ORF1ab/nsp89L9FCttTtt55B.1.1.3620.02809
ORF1ab/nsp89L9FCttTtt55C.370.00058
ORF1ab/nsp89L9FCttTtt44B.1.1.10.001307
ORF1ab/nsp89L9FCttTtt44B.1.2430.000278
ORF1ab/nsp89L9FCttTtt44B.1.438.10.000429
ORF1ab/nsp89L9FCttTtt44B.1.6370.000292
ORF1ab/nsp89L9FCttTtt44C.160.004242
ORF1ab/nsp89L9FCttTtt33AD.20.000657
ORF1ab/nsp89L9FCttTtt33AY.1030.000019
ORF1ab/nsp89L9FCttTtt33AY.1200.000112
ORF1ab/nsp89L9FCttTtt33B.1.1.100.003344
ORF1ab/nsp89L9FCttTtt33B.1.1.1530.003286
ORF1ab/nsp89L9FCttTtt33B.1.1.2160.002671
ORF1ab/nsp89L9FCttTtt33B.1.1.3010.003538
ORF1ab/nsp89L9FCttTtt33B.1.1.330.001263
ORF1ab/nsp89L9FCttTtt33B.1.177.510.013699
ORF1ab/nsp89L9FCttTtt33B.1.177.560.002003
ORF1ab/nsp89L9FCttTtt33B.1.2180.015464
ORF1ab/nsp89L9FCttTtt33B.1.36.290.001552
ORF1ab/nsp89L9FCttTtt33B.1.4000.001287
ORF1ab/nsp89L9FCttTtt33B.1.5170.001281
ORF1ab/nsp89L9FCttTtt33B.1.6210.000266
ORF1ab/nsp89L9FCttTtt33P.1.150.000697
ORF1ab/nsp89L9FCttTtt33P.20.00056
ORF1ab/nsp89L9FCttTtt33R.10.00027
ORF1ab/nsp89L9FCttTtt22AY.3.10.000171
ORF1ab/nsp89L9FCttTtt22AY.330.000134
ORF1ab/nsp89L9FCttTtt22AY.530.000575
ORF1ab/nsp89L9FCttTtt22AY.60.000082
ORF1ab/nsp89L9FCttTtt22AY.700.000417
ORF1ab/nsp89L9FCttTtt22B.1.1.2280.006098
ORF1ab/nsp89L9FCttTtt22B.1.177.120.000303
ORF1ab/nsp89L9FCttTtt22B.1.177.730.001133
ORF1ab/nsp89L9FCttTtt22B.1.390.007812
ORF1ab/nsp89L9FCttTtt22B.1.90.012346
ORF1ab/nsp89L9FCttTtt22C.360.001821
ORF1ab/nsp89L9FCttTtt22Q.80.00033
ORF1ab/nsp89L9FCttTtt11A0.000387
ORF1ab/nsp89L9FCttTtt11A.180.05
ORF1ab/nsp89L9FCttTtt11A.2.20.001689
ORF1ab/nsp89L9FCttTtt11A.2.50.000499
ORF1ab/nsp89L9FCttTtt11A.2.5.10.004808
ORF1ab/nsp89L9FCttTtt11AE.10.011364
ORF1ab/nsp89L9FCttTtt11AW.10.003049
ORF1ab/nsp89L9FCttTtt11AY.1000.000046
ORF1ab/nsp89L9FCttTtt11AY.1060.000335
ORF1ab/nsp89L9FCttTtt11AY.1140.000231
ORF1ab/nsp89L9FCttTtt11AY.1180.000063
ORF1ab/nsp89L9FCttTtt11AY.220.002092
ORF1ab/nsp89L9FCttTtt11AY.260.000028
ORF1ab/nsp89L9FCttTtt11AY.30.00001
ORF1ab/nsp89L9FCttTtt11AY.420.00004
ORF1ab/nsp89L9FCttTtt11AY.440.000006
ORF1ab/nsp89L9FCttTtt11AY.470.000031
ORF1ab/nsp89L9FCttTtt11AY.650.000533
ORF1ab/nsp89L9FCttTtt11AY.710.000475
ORF1ab/nsp89L9FCttTtt11AY.780.001541
ORF1ab/nsp89L9FCttTtt11AY.850.000427
ORF1ab/nsp89L9FCttTtt11AY.950.000761
ORF1ab/nsp89L9FCttTtt11B.1.1.1710.003676
ORF1ab/nsp89L9FCttTtt11B.1.1.1890.001513
ORF1ab/nsp89L9FCttTtt11B.1.1.2220.000204
ORF1ab/nsp89L9FCttTtt11B.1.1.250.000569
ORF1ab/nsp89L9FCttTtt11B.1.1.2690.001353
ORF1ab/nsp89L9FCttTtt11B.1.1.2790.001121
ORF1ab/nsp89L9FCttTtt11B.1.1.3220.008772
ORF1ab/nsp89L9FCttTtt11B.1.1.3260.001761
ORF1ab/nsp89L9FCttTtt11B.1.1.3440.010753
ORF1ab/nsp89L9FCttTtt11B.1.1.3630.005988
ORF1ab/nsp89L9FCttTtt11B.1.1.370.000193
ORF1ab/nsp89L9FCttTtt11B.1.1.3750.011905
ORF1ab/nsp89L9FCttTtt11B.1.1.410.006329
ORF1ab/nsp89L9FCttTtt11B.1.1.540.003021
ORF1ab/nsp89L9FCttTtt11B.1.1110.001175
ORF1ab/nsp89L9FCttTtt11B.1.160.160.000929
ORF1ab/nsp89L9FCttTtt11B.1.1730.026316
ORF1ab/nsp89L9FCttTtt11B.1.177.210.000076
ORF1ab/nsp89L9FCttTtt11B.1.177.440.000519
ORF1ab/nsp89L9FCttTtt11B.1.177.570.000281
ORF1ab/nsp89L9FCttTtt11B.1.177.600.000218
ORF1ab/nsp89L9FCttTtt11B.1.221.20.004016
ORF1ab/nsp89L9FCttTtt11B.1.2360.002053
ORF1ab/nsp89L9FCttTtt11B.1.2400.000216
ORF1ab/nsp89L9FCttTtt11B.1.2580.000067
ORF1ab/nsp89L9FCttTtt11B.1.258.220.002667
ORF1ab/nsp89L9FCttTtt11B.1.2600.003344
ORF1ab/nsp89L9FCttTtt11B.1.2930.0125
ORF1ab/nsp89L9FCttTtt11B.1.3180.038462
ORF1ab/nsp89L9FCttTtt11B.1.3400.004292
ORF1ab/nsp89L9FCttTtt11B.1.3490.000715
ORF1ab/nsp89L9FCttTtt11B.1.36.100.004785
ORF1ab/nsp89L9FCttTtt11B.1.3990.001934
ORF1ab/nsp89L9FCttTtt11B.1.4130.004255
ORF1ab/nsp89L9FCttTtt11B.1.4560.003268
ORF1ab/nsp89L9FCttTtt11B.1.4620.007246
ORF1ab/nsp89L9FCttTtt11B.1.466.20.000391
ORF1ab/nsp89L9FCttTtt11B.1.4730.019231
ORF1ab/nsp89L9FCttTtt11B.1.4970.000315
ORF1ab/nsp89L9FCttTtt11B.1.4990.00105
ORF1ab/nsp89L9FCttTtt11B.1.5030.002488
ORF1ab/nsp89L9FCttTtt11B.1.5090.000866
ORF1ab/nsp89L9FCttTtt11B.1.5240.001406
ORF1ab/nsp89L9FCttTtt11B.1.5400.009709
ORF1ab/nsp89L9FCttTtt11B.1.5430.01
ORF1ab/nsp89L9FCttTtt11B.1.5560.007519
ORF1ab/nsp89L9FCttTtt11B.1.5640.000426
ORF1ab/nsp89L9FCttTtt11B.1.6090.000479
ORF1ab/nsp89L9FCttTtt11B.1.617.10.000129
ORF1ab/nsp89L9FCttTtt11B.30.000831
ORF1ab/nsp89L9FCttTtt11B.390.002331
ORF1ab/nsp89L9FCttTtt11B.400.000364
ORF1ab/nsp89L9FCttTtt11C.37.10.002618
ORF1ab/nsp89L9FCttTtt11P.1.10.000318
ORF1ab/nsp89L9FCttTtt11P.1.140.000048
ORF1ab/nsp89L9FCttTtt11P.1.170.000162
ORF1ab/nsp89L9FCttTtt11Q.10.000126