CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = A74V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp874A74VA4016VnonsyngCtgTt386538620.99922412311-12313
ORF1ab/nsp874A74VA4016VnonsyngCTgTC386530.00077619712311-12313

Details of the mutation A74V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp874A74VgCtgTt38623865All0.000739
ORF1ab/nsp874A74VgCTgTC33865All0.000001
ORF1ab/nsp874A74VgCtgTt16191619B.1.214.20.970624
ORF1ab/nsp874A74VgCtgTt302302B.1.1.70.00027
ORF1ab/nsp874A74VgCtgTt291291B.1.5260.00684
ORF1ab/nsp874A74VgCtgTt287289B.1.360.041873
ORF1ab/nsp874A74VgCTgTC2289B.1.360.000292
ORF1ab/nsp874A74VgCtgTt174174B.1.4290.004094
ORF1ab/nsp874A74VgCtgTt136136B.1.214.30.971429
ORF1ab/nsp874A74VgCtgTt111111B.1.2400.023928
ORF1ab/nsp874A74VgCtgTt109109B.1.214.40.990909
ORF1ab/nsp874A74VgCtgTt106106B.10.000971
ORF1ab/nsp874A74VgCtgTt9090B.1.2140.32967
ORF1ab/nsp874A74VgCtgTt6666B.1.4800.164179
ORF1ab/nsp874A74VgCtgTt6262B.1.20.000546
ORF1ab/nsp874A74VgCtgTt5555B.1.1.2310.170279
ORF1ab/nsp874A74VgCtgTt4848B.1.214.10.96
ORF1ab/nsp874A74VgCtgTt3232B.1.10.000581
ORF1ab/nsp874A74VgCtgTt2828P.10.000441
ORF1ab/nsp874A74VgCtgTt1717AY.1190.0006
ORF1ab/nsp874A74VgCtgTt1515AY.40.000023
ORF1ab/nsp874A74VgCtgTt1414B.1.2100.029851
ORF1ab/nsp874A74VgCtgTt1313B.1.1.630.005015
ORF1ab/nsp874A74VgCtgTt1010B.1.5750.003034
ORF1ab/nsp874A74VgCtgTt1010B.1.617.20.000038
ORF1ab/nsp874A74VgCtgTt1010B.1.6210.000885
ORF1ab/nsp874A74VgCtgTt99B.1.1.2010.219512
ORF1ab/nsp874A74VgCtgTt99B.1.1.5190.000357
ORF1ab/nsp874A74VgCtgTt88AY.430.000035
ORF1ab/nsp874A74VgCtgTt88B.1.6360.053691
ORF1ab/nsp874A74VgCtgTt88C.36.30.004538
ORF1ab/nsp874A74VgCtgTt77AY.440.000043
ORF1ab/nsp874A74VgCtgTt77AY.50.000145
ORF1ab/nsp874A74VgCtgTt77B.1.2580.000466
ORF1ab/nsp874A74VgCtgTt66B.1.2210.000426
ORF1ab/nsp874A74VgCtgTt66B.1.2340.000792
ORF1ab/nsp874A74VgCtgTt55B.1.1770.000066
ORF1ab/nsp874A74VgCtgTt55B.1.2430.000348
ORF1ab/nsp874A74VgCtgTt55B.1.36.160.007123
ORF1ab/nsp874A74VgCtgTt55B.1.3980.014881
ORF1ab/nsp874A74VgCtgTt55B.1.4380.03268
ORF1ab/nsp874A74VgCtgTt44AY.880.003537
ORF1ab/nsp874A74VgCtgTt44B.1.1600.000125
ORF1ab/nsp874A74VgCtgTt44B.1.2410.003247
ORF1ab/nsp874A74VgCtgTt44B.1.36.350.010417
ORF1ab/nsp874A74VgCtgTt44B.1.5960.000349
ORF1ab/nsp874A74VgCtgTt33A0.001161
ORF1ab/nsp874A74VgCtgTt33AY.1030.000019
ORF1ab/nsp874A74VgCtgTt33AY.16.10.00141
ORF1ab/nsp874A74VgCtgTt33AY.390.000074
ORF1ab/nsp874A74VgCtgTt33B.1.1.2840.000322
ORF1ab/nsp874A74VgCtgTt33B.1.2390.003663
ORF1ab/nsp874A74VgCtgTt33B.1.3510.000089
ORF1ab/nsp874A74VgCtgTt33B.1.36.220.003623
ORF1ab/nsp874A74VgCtgTt33B.1.36.80.003
ORF1ab/nsp874A74VgCtgTt33B.1.4330.009585
ORF1ab/nsp874A74VgCtgTt33P.1.10.000953
ORF1ab/nsp874A74VgCtgTt22A.10.000564
ORF1ab/nsp874A74VgCtgTt22A.23.10.001408
ORF1ab/nsp874A74VgCtgTt22AU.20.004843
ORF1ab/nsp874A74VgCtgTt22AY.1000.000092
ORF1ab/nsp874A74VgCtgTt22AY.1210.000271
ORF1ab/nsp874A74VgCtgTt22B.1.1.2160.001781
ORF1ab/nsp874A74VgCtgTt22B.1.1.330.000842
ORF1ab/nsp874A74VgCtgTt22B.1.1.4480.004065
ORF1ab/nsp874A74VgCtgTt22B.1.177.860.000367
ORF1ab/nsp874A74VgCtgTt22B.1.2360.004107
ORF1ab/nsp874A74VgCtgTt22B.1.258.110.000793
ORF1ab/nsp874A74VgCtgTt22B.1.2600.006689
ORF1ab/nsp874A74VgCtgTt22B.1.36.180.00084
ORF1ab/nsp874A74VgCtgTt22B.1.36.290.001035
ORF1ab/nsp874A74VgCtgTt22B.1.3960.001411
ORF1ab/nsp874A74VgCtgTt22B.1.4590.008163
ORF1ab/nsp874A74VgCTgTC12B.1.4620.007246
ORF1ab/nsp874A74VgCtgTt12B.1.4620.007246
ORF1ab/nsp874A74VgCtgTt22B.1.5600.009259
ORF1ab/nsp874A74VgCtgTt22B.1.6090.000959
ORF1ab/nsp874A74VgCtgTt22B.1.617.10.000258
ORF1ab/nsp874A74VgCtgTt22D.20.00015
ORF1ab/nsp874A74VgCtgTt22P.1.140.000096
ORF1ab/nsp874A74VgCtgTt11AP.10.001502
ORF1ab/nsp874A74VgCtgTt11AY.1140.000231
ORF1ab/nsp874A74VgCtgTt11AY.200.000039
ORF1ab/nsp874A74VgCtgTt11AY.230.00007
ORF1ab/nsp874A74VgCtgTt11AY.250.000006
ORF1ab/nsp874A74VgCtgTt11AY.260.000028
ORF1ab/nsp874A74VgCtgTt11AY.290.000016
ORF1ab/nsp874A74VgCtgTt11AY.4.20.000022
ORF1ab/nsp874A74VgCtgTt11AY.450.000122
ORF1ab/nsp874A74VgCtgTt11AY.470.000031
ORF1ab/nsp874A74VgCtgTt11AY.540.000095
ORF1ab/nsp874A74VgCtgTt11AY.550.000917
ORF1ab/nsp874A74VgCtgTt11AY.60.000041
ORF1ab/nsp874A74VgCtgTt11AY.620.000436
ORF1ab/nsp874A74VgCtgTt11AY.670.000464
ORF1ab/nsp874A74VgCtgTt11AY.700.000209
ORF1ab/nsp874A74VgCtgTt11AY.750.000056
ORF1ab/nsp874A74VgCtgTt11AY.9.10.000084
ORF1ab/nsp874A74VgCtgTt11AY.9.20.000037
ORF1ab/nsp874A74VgCtgTt11B.1.1.10.000327
ORF1ab/nsp874A74VgCtgTt11B.1.1.100.001115
ORF1ab/nsp874A74VgCtgTt11B.1.1.1480.008772
ORF1ab/nsp874A74VgCtgTt11B.1.1.1740.003378
ORF1ab/nsp874A74VgCtgTt11B.1.1.2790.001121
ORF1ab/nsp874A74VgCtgTt11B.1.1.3090.005848
ORF1ab/nsp874A74VgCtgTt11B.1.1.3220.008772
ORF1ab/nsp874A74VgCtgTt11B.1.1.3970.002252
ORF1ab/nsp874A74VgCtgTt11B.1.1.4160.000905
ORF1ab/nsp874A74VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp874A74VgCtgTt11B.1.1.5280.004808
ORF1ab/nsp874A74VgCtgTt11B.1.1530.018868
ORF1ab/nsp874A74VgCtgTt11B.1.160.160.000929
ORF1ab/nsp874A74VgCtgTt11B.1.177.460.000918
ORF1ab/nsp874A74VgCtgTt11B.1.177.550.002331
ORF1ab/nsp874A74VgCtgTt11B.1.177.70.000165
ORF1ab/nsp874A74VgCtgTt11B.1.177.730.000566
ORF1ab/nsp874A74VgCtgTt11B.1.220.001318
ORF1ab/nsp874A74VgCtgTt11B.1.258.170.000104
ORF1ab/nsp874A74VgCtgTt11B.1.3150.006061
ORF1ab/nsp874A74VgCtgTt11B.1.36.390.002217
ORF1ab/nsp874A74VgCtgTt11B.1.3660.004878
ORF1ab/nsp874A74VgCtgTt11B.1.3990.001934
ORF1ab/nsp874A74VgCtgTt11B.1.4270.00005
ORF1ab/nsp874A74VgCtgTt11B.1.438.10.000107
ORF1ab/nsp874A74VgCtgTt11B.1.5210.004975
ORF1ab/nsp874A74VgCtgTt11B.1.5760.000907
ORF1ab/nsp874A74VgCtgTt11B.1.5820.000491
ORF1ab/nsp874A74VgCtgTt11B.1.6370.000073
ORF1ab/nsp874A74VgCtgTt11B.1.940.027027
ORF1ab/nsp874A74VgCtgTt11B.270.015385
ORF1ab/nsp874A74VgCtgTt11B.400.000364
ORF1ab/nsp874A74VgCtgTt11B.6.60.000889
ORF1ab/nsp874A74VgCtgTt11C.300.001727
ORF1ab/nsp874A74VgCtgTt11C.370.000116
ORF1ab/nsp874A74VgCtgTt11D.30.005917
ORF1ab/nsp874A74VgCtgTt11N.90.005952
ORF1ab/nsp874A74VgCtgTt11P.1.170.000162
ORF1ab/nsp874A74VgCtgTt11P.20.000187
ORF1ab/nsp874A74VgCtgTt11Q.10.000126
ORF1ab/nsp874A74VgCtgTt11Q.30.000145
ORF1ab/nsp874A74VgCtgTt11Q.40.000455