CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = A53X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp853A53XA3995XnonsynGCaTAa46260.56521712248-12250
ORF1ab/nsp853A53XA3995XnonsynGCaTGa46130.28260912248-12250
ORF1ab/nsp853A53XA3995XnonsynGCATAG4670.15217412248-12250

Details of the mutation A53X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp853A53XGCaTAa2646All0.000005
ORF1ab/nsp853A53XGCaTGa1346All0.000002
ORF1ab/nsp853A53XGCATAG746All0.000001
ORF1ab/nsp853A53XGCaTAa2443B.1.1.70.000021
ORF1ab/nsp853A53XGCaTGa1243B.1.1.70.000011
ORF1ab/nsp853A53XGCATAG743B.1.1.70.000006
ORF1ab/nsp853A53XGCaTAa11AY.250.000006
ORF1ab/nsp853A53XGCaTGa11B.1.3910.001127
ORF1ab/nsp853A53XGCaTAa11B.1.5760.000907