CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = A53L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp853A53LA3995LnonsynGCaTTa51380.74509812248-12250
ORF1ab/nsp853A53LA3995LnonsynGCATTG51110.21568612248-12250
ORF1ab/nsp853A53LA3995LnonsynGCaCTa5110.019607812248-12250
ORF1ab/nsp853A53LA3995LnonsynGCACTT5110.019607812248-12250

Details of the mutation A53L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp853A53LGCaTTa3851All0.000007
ORF1ab/nsp853A53LGCATTG1151All0.000002
ORF1ab/nsp853A53LGCaCTa151All0
ORF1ab/nsp853A53LGCACTT151All0
ORF1ab/nsp853A53LGCaTTa3446B.1.1.70.00003
ORF1ab/nsp853A53LGCATTG1046B.1.1.70.000009
ORF1ab/nsp853A53LGCACTT146B.1.1.70.000001
ORF1ab/nsp853A53LGCaCTa146B.1.1.70.000001
ORF1ab/nsp853A53LGCaTTa12P.10.000016
ORF1ab/nsp853A53LGCATTG12P.10.000016
ORF1ab/nsp853A53LGCaTTa11AY.250.000006
ORF1ab/nsp853A53LGCaTTa11B.1.10.000018
ORF1ab/nsp853A53LGCaTTa11B.1.5760.000907