CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : Mut = A13A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp813A13AA3955AsyngcAgcG6755590.82814812128-12130
ORF1ab/nsp813A13AA3955AsyngcAgcT675870.12888912128-12130
ORF1ab/nsp813A13AA3955AsyngcAgcC675290.04296312128-12130

Details of the mutation A13A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp813A13AgcAgcG559675All0.000107
ORF1ab/nsp813A13AgcAgcT87675All0.000017
ORF1ab/nsp813A13AgcAgcC29675All0.000006
ORF1ab/nsp813A13AgcAgcG155155AY.330.010351
ORF1ab/nsp813A13AgcAgcG107114B.1.1.70.000096
ORF1ab/nsp813A13AgcAgcT6114B.1.1.70.000005
ORF1ab/nsp813A13AgcAgcC1114B.1.1.70.000001
ORF1ab/nsp813A13AgcAgcG5970AY.440.000359
ORF1ab/nsp813A13AgcAgcT1170AY.440.000067
ORF1ab/nsp813A13AgcAgcG4646B.1.4600.821429
ORF1ab/nsp813A13AgcAgcG3333B.1.20.000291
ORF1ab/nsp813A13AgcAgcG1530B.1.617.20.000056
ORF1ab/nsp813A13AgcAgcT1530B.1.617.20.000056
ORF1ab/nsp813A13AgcAgcG2329AY.40.000036
ORF1ab/nsp813A13AgcAgcT329AY.40.000005
ORF1ab/nsp813A13AgcAgcC329AY.40.000005
ORF1ab/nsp813A13AgcAgcC1620B.1.360.002334
ORF1ab/nsp813A13AgcAgcG420B.1.360.000584
ORF1ab/nsp813A13AgcAgcG1719AY.30.000169
ORF1ab/nsp813A13AgcAgcC219AY.30.00002
ORF1ab/nsp813A13AgcAgcT1013AY.1020.000265
ORF1ab/nsp813A13AgcAgcG313AY.1020.00008
ORF1ab/nsp813A13AgcAgcT1010AY.1190.000353
ORF1ab/nsp813A13AgcAgcG99AY.250.000054
ORF1ab/nsp813A13AgcAgcG79B.10.000064
ORF1ab/nsp813A13AgcAgcC19B.10.000009
ORF1ab/nsp813A13AgcAgcT19B.10.000009
ORF1ab/nsp813A13AgcAgcT58AY.430.000022
ORF1ab/nsp813A13AgcAgcG38AY.430.000013
ORF1ab/nsp813A13AgcAgcT66AY.1110.001099
ORF1ab/nsp813A13AgcAgcG66AY.420.000241
ORF1ab/nsp813A13AgcAgcG55AY.200.000194
ORF1ab/nsp813A13AgcAgcG34AY.1030.000019
ORF1ab/nsp813A13AgcAgcT14AY.1030.000006
ORF1ab/nsp813A13AgcAgcG44AY.98.10.000194
ORF1ab/nsp813A13AgcAgcG34B.1.5260.000071
ORF1ab/nsp813A13AgcAgcT14B.1.5260.000024
ORF1ab/nsp813A13AgcAgcG44B.1.5750.001214
ORF1ab/nsp813A13AgcAgcC330.166667
ORF1ab/nsp813A13AgcAgcT33AY.460.000312
ORF1ab/nsp813A13AgcAgcG33AY.740.000347
ORF1ab/nsp813A13AgcAgcG33B.1.1.2220.000612
ORF1ab/nsp813A13AgcAgcG33B.1.1600.000094
ORF1ab/nsp813A13AgcAgcG33B.1.466.20.001174
ORF1ab/nsp813A13AgcAgcG33B.40.006623
ORF1ab/nsp813A13AgcAgcG33P.1.100.000808
ORF1ab/nsp813A13AgcAgcG22AY.1000.000092
ORF1ab/nsp813A13AgcAgcT22AY.230.000139
ORF1ab/nsp813A13AgcAgcG22B.1.10.000036
ORF1ab/nsp813A13AgcAgcT22B.1.1.3180.000604
ORF1ab/nsp813A13AgcAgcG22B.1.177.60.001953
ORF1ab/nsp813A13AgcAgcC22B.1.2210.000142
ORF1ab/nsp813A13AgcAgcG22B.1.3110.000549
ORF1ab/nsp813A13AgcAgcT22B.1.351.30.001753
ORF1ab/nsp813A13AgcAgcT22P.1.170.000324
ORF1ab/nsp813A13AgcAgcG11AD.20.000219
ORF1ab/nsp813A13AgcAgcG11AY.1070.000466
ORF1ab/nsp813A13AgcAgcG11AY.1130.000142
ORF1ab/nsp813A13AgcAgcG11AY.1180.000063
ORF1ab/nsp813A13AgcAgcG11AY.290.000016
ORF1ab/nsp813A13AgcAgcG11AY.390.000025
ORF1ab/nsp813A13AgcAgcG11AY.46.20.000635
ORF1ab/nsp813A13AgcAgcG11AY.470.000031
ORF1ab/nsp813A13AgcAgcG11AY.540.000095
ORF1ab/nsp813A13AgcAgcG11AY.610.000105
ORF1ab/nsp813A13AgcAgcG11AY.690.000187
ORF1ab/nsp813A13AgcAgcT11AY.790.001211
ORF1ab/nsp813A13AgcAgcT11AY.90.000068
ORF1ab/nsp813A13AgcAgcT11AY.99.20.000092
ORF1ab/nsp813A13AgcAgcT11B.1.1.2160.00089
ORF1ab/nsp813A13AgcAgcG11B.1.1.2770.000759
ORF1ab/nsp813A13AgcAgcG11B.1.1.280.000311
ORF1ab/nsp813A13AgcAgcG11B.1.1.3280.016949
ORF1ab/nsp813A13AgcAgcT11B.1.1260.001276
ORF1ab/nsp813A13AgcAgcG11B.1.1770.000013
ORF1ab/nsp813A13AgcAgcG11B.1.177.160.000664
ORF1ab/nsp813A13AgcAgcG11B.1.177.810.000189
ORF1ab/nsp813A13AgcAgcG11B.1.2580.000067
ORF1ab/nsp813A13AgcAgcG11B.1.36.80.001
ORF1ab/nsp813A13AgcAgcG11B.1.4270.00005
ORF1ab/nsp813A13AgcAgcC11B.1.5250.000113
ORF1ab/nsp813A13AgcAgcG11B.1.5510.00129
ORF1ab/nsp813A13AgcAgcG11B.1.5950.000261
ORF1ab/nsp813A13AgcAgcG11B.1.5960.000087
ORF1ab/nsp813A13AgcAgcG11B.6.80.008264
ORF1ab/nsp813A13AgcAgcT11C.360.000911
ORF1ab/nsp813A13AgcAgcG11D.20.000075
ORF1ab/nsp813A13AgcAgcG11P.10.000016
ORF1ab/nsp813A13AgcAgcT11P.1.150.000232
ORF1ab/nsp813A13AgcAgcG11R.10.00009