CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 53 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp853A53AA3995AsyngcAgcT190110100.53129912248-12250

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp853A53AgcAgcT10101901All0.000193
ORF1ab/nsp853A53AgcAgcT816816AY.1100.091954
ORF1ab/nsp853A53AgcAgcT6767AY.160.025437
ORF1ab/nsp853A53AgcAgcT3961B.1.1.70.000035
ORF1ab/nsp853A53AgcAgcT1636B.1.617.20.00006
ORF1ab/nsp853A53AgcAgcT2222AY.4.50.002365
ORF1ab/nsp853A53AgcAgcT214B.1.1770.000026
ORF1ab/nsp853A53AgcAgcT1010AY.300.003957
ORF1ab/nsp853A53AgcAgcT310P.10.000047
ORF1ab/nsp853A53AgcAgcT19P.1.140.000048
ORF1ab/nsp853A53AgcAgcT28AY.250.000012
ORF1ab/nsp853A53AgcAgcT28B.1.10.000036
ORF1ab/nsp853A53AgcAgcT37B.1.20.000026
ORF1ab/nsp853A53AgcAgcT15AY.430.000004
ORF1ab/nsp853A53AgcAgcT25B.10.000018
ORF1ab/nsp853A53AgcAgcT55B.1.5410.022124
ORF1ab/nsp853A53AgcAgcT14AY.440.000006
ORF1ab/nsp853A53AgcAgcT44B.1.5260.000094
ORF1ab/nsp853A53AgcAgcT22AY.1000.000092
ORF1ab/nsp853A53AgcAgcT22AY.1170.000169
ORF1ab/nsp853A53AgcAgcT12AY.30.00001
ORF1ab/nsp853A53AgcAgcT12AY.360.000148
ORF1ab/nsp853A53AgcAgcT22AY.840.000875
ORF1ab/nsp853A53AgcAgcT11AY.1110.000183
ORF1ab/nsp853A53AgcAgcT11AY.180.010101
ORF1ab/nsp853A53AgcAgcT11AY.230.00007
ORF1ab/nsp853A53AgcAgcT11AY.850.000427
ORF1ab/nsp853A53AgcAgcT11AY.930.000273
ORF1ab/nsp853A53AgcAgcT11B0.000128