CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 36

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp836K36QK3978QnonsynAaaCaa450450112197-12199
ORF1ab/nsp836K36KK3978KsynaaAaaG261261112197-12199
ORF1ab/nsp836K36RK3978RnonsynaAaaGa3838112197-12199
ORF1ab/nsp836K36del1K3978del1delAaa-aa2020112197-12199
ORF1ab/nsp836K36delK3978deldelAAA---1818112197-12199
ORF1ab/nsp836K36XK3978XnonsynAaaTaa99112197-12199
ORF1ab/nsp836K36NK3978NnonsynaaAaaT960.66666712197-12199
ORF1ab/nsp836K36NK3978NnonsynaaAaaC930.33333312197-12199
ORF1ab/nsp836K36del2K3978del2delAAa--a55112197-12199
ORF1ab/nsp836K36EK3978EnonsynAaaGaa430.7512197-12199
ORF1ab/nsp836K36EK3978EnonsynAaAGaG410.2512197-12199
ORF1ab/nsp836K36TK3978TnonsynaAaaCa22112197-12199
ORF1ab/nsp836K36GK3978GnonsynAAaGGa22112197-12199
ORF1ab/nsp836K36IK3978InonsynaAaaTa22112197-12199

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp836K36QAaaCaa450450All0.000086
ORF1ab/nsp836K36QAaaCaa433433B.1.5740.931183
ORF1ab/nsp836K36KaaAaaG261261All0.00005
ORF1ab/nsp836K36KaaAaaG156156B.1.1.2910.115813
ORF1ab/nsp836K36RaAaaGa3838All0.000007
ORF1ab/nsp836K36KaaAaaG3838AY.40.000059
ORF1ab/nsp836K36del1Aaa-aa2020All0.000004
ORF1ab/nsp836K36delAAA---1818All0.000003
ORF1ab/nsp836K36RaAaaGa1515B.1.1.70.000013
ORF1ab/nsp836K36KaaAaaG1313D.20.000976
ORF1ab/nsp836K36KaaAaaG1212AY.46.20.007624
ORF1ab/nsp836K36QAaaCaa1010B.10.000092
ORF1ab/nsp836K36XAaaTaa99All0.000002
ORF1ab/nsp836K36NaaAaaT69All0.000001
ORF1ab/nsp836K36NaaAaaC39All0.000001
ORF1ab/nsp836K36del2AAa--a55All0.000001
ORF1ab/nsp836K36delAAA---55AY.250.00003
ORF1ab/nsp836K36KaaAaaG55AY.440.00003
ORF1ab/nsp836K36KaaAaaG55B.1.10.000091
ORF1ab/nsp836K36KaaAaaG55B.1.1.70.000004
ORF1ab/nsp836K36del1Aaa-aa55B.1.20.000044
ORF1ab/nsp836K36EAaaGaa34All0.000001
ORF1ab/nsp836K36EAaAGaG14All0
ORF1ab/nsp836K36KaaAaaG44AY.1030.000025
ORF1ab/nsp836K36KaaAaaG44AY.340.000388
ORF1ab/nsp836K36KaaAaaG44AY.470.000124
ORF1ab/nsp836K36QAaaCaa44B.1.1.70.000004
ORF1ab/nsp836K36delAAA---44B.1.1.70.000004
ORF1ab/nsp836K36RaAaaGa44C.350.003096
ORF1ab/nsp836K36NaaAaaT33AY.260.000085
ORF1ab/nsp836K36RaAaaGa33AY.30.00003
ORF1ab/nsp836K36del1Aaa-aa33AY.440.000018
ORF1ab/nsp836K36XAaaTaa33B.1.1.70.000003
ORF1ab/nsp836K36del1Aaa-aa33B.1.617.20.000011
ORF1ab/nsp836K36IaAaaTa22All0
ORF1ab/nsp836K36TaAaaCa22All0
ORF1ab/nsp836K36GAAaGGa22All0
ORF1ab/nsp836K36RaAaaGa22AY.430.000009
ORF1ab/nsp836K36XAaaTaa22B.10.000018
ORF1ab/nsp836K36NaaAaaC22B.1.1.5190.000079
ORF1ab/nsp836K36del2AAa--a22B.1.1.70.000002
ORF1ab/nsp836K36QAaaCaa22B.1.20.000018
ORF1ab/nsp836K36RaAaaGa22B.1.617.20.000008
ORF1ab/nsp836K36del1Aaa-aa22B.1.6270.00404
ORF1ab/nsp836K36EAaaGaa110.055556
ORF1ab/nsp836K36XAaaTaa110.055556
ORF1ab/nsp836K36del2AAa--a11A0.000387
ORF1ab/nsp836K36KaaAaaG11A.10.000282
ORF1ab/nsp836K36NaaAaaC11A.2.20.001689
ORF1ab/nsp836K36NaaAaaT11AY.1020.000027
ORF1ab/nsp836K36KaaAaaG11AY.1020.000027
ORF1ab/nsp836K36del1Aaa-aa11AY.1030.000006
ORF1ab/nsp836K36del1Aaa-aa11AY.120.10.000321
ORF1ab/nsp836K36EAaaGaa11AY.230.00007
ORF1ab/nsp836K36EAaaGaa11AY.250.000006
ORF1ab/nsp836K36KaaAaaG11AY.300.000396
ORF1ab/nsp836K36IaAaaTa11AY.330.000067
ORF1ab/nsp836K36NaaAaaT11AY.40.000002
ORF1ab/nsp836K36RaAaaGa11AY.40.000002
ORF1ab/nsp836K36delAAA---11AY.40.000002
ORF1ab/nsp836K36KaaAaaG11AY.4.20.000022
ORF1ab/nsp836K36delAAA---11AY.430.000004
ORF1ab/nsp836K36del1Aaa-aa11AY.430.000004
ORF1ab/nsp836K36KaaAaaG11AY.430.000004
ORF1ab/nsp836K36RaAaaGa11AY.440.000006
ORF1ab/nsp836K36TaAaaCa11AY.460.000104
ORF1ab/nsp836K36del1Aaa-aa11AY.46.20.000635
ORF1ab/nsp836K36KaaAaaG11AY.46.60.000072
ORF1ab/nsp836K36EAaAGaG11AY.550.000917
ORF1ab/nsp836K36IaAaaTa11AY.9.20.000037
ORF1ab/nsp836K36delAAA---11B0.000128
ORF1ab/nsp836K36delAAA---11B.10.000009
ORF1ab/nsp836K36NaaAaaT11B.10.000009
ORF1ab/nsp836K36del1Aaa-aa11B.10.000009
ORF1ab/nsp836K36KaaAaaG11B.10.000009
ORF1ab/nsp836K36del1Aaa-aa11B.1.10.000018
ORF1ab/nsp836K36KaaAaaG11B.1.1.1580.012195
ORF1ab/nsp836K36RaAaaGa11B.1.1.1860.003436
ORF1ab/nsp836K36RaAaaGa11B.1.1.2160.00089
ORF1ab/nsp836K36TaAaaCa11B.1.1.3000.010753
ORF1ab/nsp836K36KaaAaaG11B.1.1.330.000421
ORF1ab/nsp836K36del1Aaa-aa11B.1.1.70.000001
ORF1ab/nsp836K36KaaAaaG11B.1.1600.000031
ORF1ab/nsp836K36KaaAaaG11B.1.1770.000013
ORF1ab/nsp836K36RaAaaGa11B.1.1770.000013
ORF1ab/nsp836K36RaAaaGa11B.1.20.000009
ORF1ab/nsp836K36del2AAa--a11B.1.20.000009
ORF1ab/nsp836K36XAaaTaa11B.1.20.000009
ORF1ab/nsp836K36RaAaaGa11B.1.2210.000071
ORF1ab/nsp836K36delAAA---11B.1.3540.043478
ORF1ab/nsp836K36RaAaaGa11B.1.3620.001541
ORF1ab/nsp836K36del2AAa--a11B.1.4290.000024
ORF1ab/nsp836K36RaAaaGa11B.1.4290.000024
ORF1ab/nsp836K36RaAaaGa11B.1.4380.006536
ORF1ab/nsp836K36KaaAaaG11B.1.4380.006536
ORF1ab/nsp836K36QAaaCaa11B.1.5110.034483
ORF1ab/nsp836K36KaaAaaG11B.1.5260.000024
ORF1ab/nsp836K36delAAA---11B.1.5950.000261
ORF1ab/nsp836K36GAAaGGa11B.1.617.20.000004
ORF1ab/nsp836K36KaaAaaG11B.1.617.20.000004
ORF1ab/nsp836K36delAAA---11B.1.6210.000089
ORF1ab/nsp836K36XAaaTaa11B.30.000831
ORF1ab/nsp836K36GAAaGGa11C.170.055556
ORF1ab/nsp836K36RaAaaGa11D.20.000075
ORF1ab/nsp836K36XAaaTaa11D.20.000075
ORF1ab/nsp836K36delAAA---11N.40.004255
ORF1ab/nsp836K36KaaAaaG11P.10.000016
ORF1ab/nsp836K36RaAaaGa11P.10.000016
ORF1ab/nsp836K36delAAA---11Q.20.000613