CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 24 & Codon = caT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp824Q24HQ3966HnonsyncaGcaT147314670.99592712161-12163

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp824Q24HcaGcaT14671473All0.000281
ORF1ab/nsp824Q24HcaGcaT906906B.1.6370.066204
ORF1ab/nsp824Q24HcaGcaT157157AY.860.13029
ORF1ab/nsp824Q24HcaGcaT7272B.10.000659
ORF1ab/nsp824Q24HcaGcaT5354B.1.1.70.000047
ORF1ab/nsp824Q24HcaGcaT2929B.1.617.20.000109
ORF1ab/nsp824Q24HcaGcaT2626AY.1030.000161
ORF1ab/nsp824Q24HcaGcaT2525AY.40.000039
ORF1ab/nsp824Q24HcaGcaT1617AY.440.000097
ORF1ab/nsp824Q24HcaGcaT1616B.1.177.750.016649
ORF1ab/nsp824Q24HcaGcaT1414AY.250.000084
ORF1ab/nsp824Q24HcaGcaT1414B.1.6280.004933
ORF1ab/nsp824Q24HcaGcaT1313AY.30.000129
ORF1ab/nsp824Q24HcaGcaT1212AY.1000.000552
ORF1ab/nsp824Q24HcaGcaT99AY.430.00004
ORF1ab/nsp824Q24HcaGcaT88B.1.10.000145
ORF1ab/nsp824Q24HcaGcaT77B.1.5650.005673
ORF1ab/nsp824Q24HcaGcaT66AY.420.000241
ORF1ab/nsp824Q24HcaGcaT66B.1.20.000053
ORF1ab/nsp824Q24HcaGcaT55AY.1010.002452
ORF1ab/nsp824Q24HcaGcaT55B.1.1.5190.000199
ORF1ab/nsp824Q24HcaGcaT44AY.450.000487
ORF1ab/nsp824Q24HcaGcaT44AY.99.20.000369
ORF1ab/nsp824Q24HcaGcaT44B.1.1600.000125
ORF1ab/nsp824Q24HcaGcaT33AY.390.000074
ORF1ab/nsp824Q24HcaGcaT33B.1.5260.000071
ORF1ab/nsp824Q24HcaGcaT23D.20.00015
ORF1ab/nsp824Q24HcaGcaT23P.10.000032
ORF1ab/nsp824Q24HcaGcaT22AY.1070.000932
ORF1ab/nsp824Q24HcaGcaT12AY.1080.001103
ORF1ab/nsp824Q24HcaGcaT22AY.240.000862
ORF1ab/nsp824Q24HcaGcaT22AY.270.000129
ORF1ab/nsp824Q24HcaGcaT22AY.46.20.001271
ORF1ab/nsp824Q24HcaGcaT22B.1.1.2070.002364
ORF1ab/nsp824Q24HcaGcaT22B.1.1.250.001137
ORF1ab/nsp824Q24HcaGcaT22B.1.1.4120.015267
ORF1ab/nsp824Q24HcaGcaT22B.1.177.70.00033
ORF1ab/nsp824Q24HcaGcaT22B.1.3360.004878
ORF1ab/nsp824Q24HcaGcaT12B.1.3690.000285
ORF1ab/nsp824Q24HcaGcaT11AY.1020.000027
ORF1ab/nsp824Q24HcaGcaT11AY.1110.000183
ORF1ab/nsp824Q24HcaGcaT11AY.23.10.000417
ORF1ab/nsp824Q24HcaGcaT11AY.260.000028
ORF1ab/nsp824Q24HcaGcaT11AY.290.000016
ORF1ab/nsp824Q24HcaGcaT11AY.4.20.000022
ORF1ab/nsp824Q24HcaGcaT11AY.4.50.000107
ORF1ab/nsp824Q24HcaGcaT11AY.460.000104
ORF1ab/nsp824Q24HcaGcaT11AY.50.000021
ORF1ab/nsp824Q24HcaGcaT11AY.540.000095
ORF1ab/nsp824Q24HcaGcaT11AY.870.000833
ORF1ab/nsp824Q24HcaGcaT11B.1.1.280.000311
ORF1ab/nsp824Q24HcaGcaT11B.1.1.370.000193
ORF1ab/nsp824Q24HcaGcaT11B.1.1.390.00051
ORF1ab/nsp824Q24HcaGcaT11B.1.1.4020.011111
ORF1ab/nsp824Q24HcaGcaT11B.1.1.5250.005464
ORF1ab/nsp824Q24HcaGcaT11B.1.177.500.004695
ORF1ab/nsp824Q24HcaGcaT11B.1.2210.000071
ORF1ab/nsp824Q24HcaGcaT11B.1.258.170.000104
ORF1ab/nsp824Q24HcaGcaT11B.1.3380.008621
ORF1ab/nsp824Q24HcaGcaT11B.1.351.30.000876
ORF1ab/nsp824Q24HcaGcaT11B.1.4000.000429
ORF1ab/nsp824Q24HcaGcaT11B.4.70.010101
ORF1ab/nsp824Q24HcaGcaT11P.1.170.000162
ORF1ab/nsp824Q24HcaGcaT11Q.30.000145
ORF1ab/nsp824Q24HcaGcaT11Q.80.000165