CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 190

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8190R190RR4132RsynagGagA8127930.97660112659-12661
ORF1ab/nsp8190R190RR4132RsynAggCgg812190.02339912659-12661
ORF1ab/nsp8190R190KR4132KnonsynaGgaAg4444112659-12661
ORF1ab/nsp8190R190PR4132PnonsynAGGCCT2525112659-12661
ORF1ab/nsp8190R190delR4132deldelAGG---1212112659-12661
ORF1ab/nsp8190R190MR4132MnonsynaGgaTg1212112659-12661
ORF1ab/nsp8190R190SR4132SnonsynagGagT99112659-12661
ORF1ab/nsp8190R190GR4132GnonsynAggGgg860.7512659-12661
ORF1ab/nsp8190R190GR4132GnonsynAgGGgT820.2512659-12661
ORF1ab/nsp8190R190CR4132CnonsynAgGTgT44112659-12661
ORF1ab/nsp8190R190ER4132EnonsynAGgGAg33112659-12661
ORF1ab/nsp8190R190WR4132WnonsynAggTgg33112659-12661
ORF1ab/nsp8190R190LR4132LnonsynAGGTTA22112659-12661
ORF1ab/nsp8190R190VR4132VnonsynAGGGTT22112659-12661
ORF1ab/nsp8190R190FR4132FnonsynAGGTTT22112659-12661
ORF1ab/nsp8190R190TR4132TnonsynaGGaCA210.512659-12661
ORF1ab/nsp8190R190TR4132TnonsynaGgaCg210.512659-12661
ORF1ab/nsp8190R190QR4132QnonsynAGgCAg11112659-12661
ORF1ab/nsp8190R190del1R4132del1delaGga-g11112659-12661

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8190R190RagGagA793812All0.000152
ORF1ab/nsp8190R190RAggCgg19812All0.000004
ORF1ab/nsp8190R190RagGagA136136C.261
ORF1ab/nsp8190R190RagGagA8390B.1.1.70.000074
ORF1ab/nsp8190R190RAggCgg790B.1.1.70.000006
ORF1ab/nsp8190R190RagGagA6969B.1.20.000608
ORF1ab/nsp8190R190KaGgaAg4444All0.000008
ORF1ab/nsp8190R190RagGagA3742AY.30.000368
ORF1ab/nsp8190R190RAggCgg542AY.30.00005
ORF1ab/nsp8190R190RagGagA4242AY.440.000256
ORF1ab/nsp8190R190RagGagA4242B.1.617.20.000158
ORF1ab/nsp8190R190RagGagA3336AY.40.000051
ORF1ab/nsp8190R190RAggCgg336AY.40.000005
ORF1ab/nsp8190R190RagGagA3030AP.10.045045
ORF1ab/nsp8190R190PAGGCCT2525All0.000005
ORF1ab/nsp8190R190RagGagA2222P.10.000347
ORF1ab/nsp8190R190RagGagA1717B.1.4290.0004
ORF1ab/nsp8190R190RagGagA1516AY.250.00009
ORF1ab/nsp8190R190RAggCgg116AY.250.000006
ORF1ab/nsp8190R190RagGagA1313B.10.000119
ORF1ab/nsp8190R190RagGagA1313C.160.013786
ORF1ab/nsp8190R190delAGG---1212All0.000002
ORF1ab/nsp8190R190MaGgaTg1212All0.000002
ORF1ab/nsp8190R190RagGagA1111B.1.1600.000343
ORF1ab/nsp8190R190RagGagA1111B.1.6370.000804
ORF1ab/nsp8190R190RagGagA1010AY.290.000158
ORF1ab/nsp8190R190SagGagT99All0.000002
ORF1ab/nsp8190R190RagGagA99B.1.6210.000797
ORF1ab/nsp8190R190RagGagA99P.20.00168
ORF1ab/nsp8190R190GAggGgg68All0.000001
ORF1ab/nsp8190R190GAgGGgT28All0
ORF1ab/nsp8190R190RagGagA88AY.1020.000212
ORF1ab/nsp8190R190RagGagA88AY.4.20.000174
ORF1ab/nsp8190R190RagGagA88B.1.1770.000105
ORF1ab/nsp8190R190RagGagA77AY.390.000173
ORF1ab/nsp8190R190RagGagA77AY.430.000031
ORF1ab/nsp8190R190PAGGCCT77AY.440.000043
ORF1ab/nsp8190R190KaGgaAg77B.1.1.70.000006
ORF1ab/nsp8190R190RagGagA66AY.100.00318
ORF1ab/nsp8190R190RagGagA66Q.30.00087
ORF1ab/nsp8190R190RagGagA55AY.420.000201
ORF1ab/nsp8190R190MaGgaTg55B.10.000046
ORF1ab/nsp8190R190RagGagA55B.1.10.000091
ORF1ab/nsp8190R190RagGagA55B.1.4800.012438
ORF1ab/nsp8190R190CAgGTgT440.222222
ORF1ab/nsp8190R190SagGagT440.222222
ORF1ab/nsp8190R190CAgGTgT44All0.000001
ORF1ab/nsp8190R190PAGGCCT44AY.1030.000025
ORF1ab/nsp8190R190KaGgaAg44AY.1060.00134
ORF1ab/nsp8190R190RagGagA44AY.3.10.000341
ORF1ab/nsp8190R190RagGagA44AY.360.000593
ORF1ab/nsp8190R190RagGagA44AY.46.40.000658
ORF1ab/nsp8190R190RagGagA44AY.750.000224
ORF1ab/nsp8190R190KaGgaAg44B.1.1.2160.003562
ORF1ab/nsp8190R190RagGagA44B.1.1.250.002274
ORF1ab/nsp8190R190delAGG---44B.1.1.70.000004
ORF1ab/nsp8190R190RagGagA44B.1.2580.000266
ORF1ab/nsp8190R190RagGagA44B.1.4270.000202
ORF1ab/nsp8190R190RagGagA44B.1.5260.000094
ORF1ab/nsp8190R190RagGagA33A.20.001985
ORF1ab/nsp8190R190WAggTgg33All0.000001
ORF1ab/nsp8190R190EAGgGAg33All0.000001
ORF1ab/nsp8190R190RagGagA33AY.1200.000112
ORF1ab/nsp8190R190PAGGCCT33AY.250.000018
ORF1ab/nsp8190R190RagGagA33B.1.1.2220.000612
ORF1ab/nsp8190R190KaGgaAg33B.1.20.000026
ORF1ab/nsp8190R190RagGagA33B.1.2430.000209
ORF1ab/nsp8190R190PAGGCCT33B.1.617.20.000011
ORF1ab/nsp8190R190RagGagA33C.370.000348
ORF1ab/nsp8190R190RagGagA33P.1.140.000143
ORF1ab/nsp8190R190RagGagA33R.10.00027
ORF1ab/nsp8190R190GAgGGgT220.111111
ORF1ab/nsp8190R190VAGGGTT220.111111
ORF1ab/nsp8190R190FAGGTTT220.111111
ORF1ab/nsp8190R190FAGGTTT22All0
ORF1ab/nsp8190R190VAGGGTT22All0
ORF1ab/nsp8190R190LAGGTTA22All0
ORF1ab/nsp8190R190TaGgaCg12All0
ORF1ab/nsp8190R190TaGGaCA12All0
ORF1ab/nsp8190R190RagGagA22AY.29.10.000441
ORF1ab/nsp8190R190RagGagA22AY.330.000134
ORF1ab/nsp8190R190RagGagA22AY.4.50.000215
ORF1ab/nsp8190R190KaGgaAg22AY.430.000009
ORF1ab/nsp8190R190KaGgaAg22AY.440.000012
ORF1ab/nsp8190R190RagGagA22AY.450.000243
ORF1ab/nsp8190R190KaGgaAg22AY.46.40.000329
ORF1ab/nsp8190R190RagGagA22AY.840.000875
ORF1ab/nsp8190R190PAGGCCT22B0.000256
ORF1ab/nsp8190R190WAggTgg22B.10.000018
ORF1ab/nsp8190R190KaGgaAg22B.1.10.000036
ORF1ab/nsp8190R190RagGagA22B.1.1.1570.001826
ORF1ab/nsp8190R190RagGagA22B.1.1.3480.001592
ORF1ab/nsp8190R190RagGagA22B.1.1.3720.001377
ORF1ab/nsp8190R190RagGagA22B.1.1.5190.000079
ORF1ab/nsp8190R190RagGagA22B.1.1.5230.003125
ORF1ab/nsp8190R190MaGgaTg22B.1.1.70.000002
ORF1ab/nsp8190R190GAggGgg22B.1.1.70.000002
ORF1ab/nsp8190R190RagGagA22B.1.36.360.001204
ORF1ab/nsp8190R190RagGagA22B.1.416.10.003125
ORF1ab/nsp8190R190KaGgaAg22B.1.4290.000047
ORF1ab/nsp8190R190MaGgaTg22D.20.00015
ORF1ab/nsp8190R190TaGgaCg11A0.000387
ORF1ab/nsp8190R190RagGagA11A.50.001923
ORF1ab/nsp8190R190KaGgaAg11AD.20.000219
ORF1ab/nsp8190R190QAGgCAg11All0
ORF1ab/nsp8190R190del1aGga-g11All0
ORF1ab/nsp8190R190RagGagA11AY.1000.000046
ORF1ab/nsp8190R190KaGgaAg11AY.1030.000006
ORF1ab/nsp8190R190RagGagA11AY.1030.000006
ORF1ab/nsp8190R190RagGagA11AY.1060.000335
ORF1ab/nsp8190R190delAGG---11AY.1110.000183
ORF1ab/nsp8190R190PAGGCCT11AY.1170.000085
ORF1ab/nsp8190R190RagGagA11AY.1180.000063
ORF1ab/nsp8190R190RagGagA11AY.1190.000035
ORF1ab/nsp8190R190PAGGCCT11AY.130.000161
ORF1ab/nsp8190R190RagGagA11AY.190.00114
ORF1ab/nsp8190R190RagGagA11AY.200.000039
ORF1ab/nsp8190R190PAGGCCT11AY.230.00007
ORF1ab/nsp8190R190RagGagA11AY.230.00007
ORF1ab/nsp8190R190RagGagA11AY.23.10.000417
ORF1ab/nsp8190R190delAGG---11AY.250.000006
ORF1ab/nsp8190R190RagGagA11AY.260.000028
ORF1ab/nsp8190R190PAGGCCT11AY.30.00001
ORF1ab/nsp8190R190RagGagA11AY.320.000532
ORF1ab/nsp8190R190RagGagA11AY.39.10.00004
ORF1ab/nsp8190R190KaGgaAg11AY.40.000002
ORF1ab/nsp8190R190MaGgaTg11AY.40.000002
ORF1ab/nsp8190R190delAGG---11AY.430.000004
ORF1ab/nsp8190R190EAGgGAg11AY.440.000006
ORF1ab/nsp8190R190RagGagA11AY.46.50.000198
ORF1ab/nsp8190R190RagGagA11AY.50.000021
ORF1ab/nsp8190R190KaGgaAg11AY.50.000021
ORF1ab/nsp8190R190GAggGgg11AY.590.00053
ORF1ab/nsp8190R190RagGagA11AY.60.000041
ORF1ab/nsp8190R190RagGagA11AY.620.000436
ORF1ab/nsp8190R190RAggCgg11AY.650.000533
ORF1ab/nsp8190R190EAGgGAg11AY.670.000464
ORF1ab/nsp8190R190RagGagA11AY.70.000196
ORF1ab/nsp8190R190RagGagA11AY.7.10.000113
ORF1ab/nsp8190R190EAGgGAg11AY.750.000056
ORF1ab/nsp8190R190PAGGCCT11AY.840.000437
ORF1ab/nsp8190R190RagGagA11AY.9.10.000084
ORF1ab/nsp8190R190RagGagA11AY.9.20.000037
ORF1ab/nsp8190R190GAggGgg11AY.9.20.000037
ORF1ab/nsp8190R190RagGagA11AY.900.000684
ORF1ab/nsp8190R190PAGGCCT11AY.98.10.000048
ORF1ab/nsp8190R190KaGgaAg11AY.98.10.000048
ORF1ab/nsp8190R190delAGG---11AY.990.001049
ORF1ab/nsp8190R190KaGgaAg11B.10.000009
ORF1ab/nsp8190R190QAGgCAg11B.10.000009
ORF1ab/nsp8190R190SagGagT11B.10.000009
ORF1ab/nsp8190R190TaGGaCA11B.1.10.000018
ORF1ab/nsp8190R190SagGagT11B.1.10.000018
ORF1ab/nsp8190R190LAGGTTA11B.1.10.000018
ORF1ab/nsp8190R190RagGagA11B.1.1.10.000327
ORF1ab/nsp8190R190KaGgaAg11B.1.1.1760.000439
ORF1ab/nsp8190R190WAggTgg11B.1.1.2080.012195
ORF1ab/nsp8190R190RagGagA11B.1.1.2410.00207
ORF1ab/nsp8190R190KaGgaAg11B.1.1.280.000311
ORF1ab/nsp8190R190delAGG---11B.1.1.280.000311
ORF1ab/nsp8190R190RagGagA11B.1.1.2970.002237
ORF1ab/nsp8190R190RagGagA11B.1.1.3180.000302
ORF1ab/nsp8190R190RagGagA11B.1.1.3240.052632
ORF1ab/nsp8190R190delAGG---11B.1.1.3480.000796
ORF1ab/nsp8190R190RagGagA11B.1.1.50.008333
ORF1ab/nsp8190R190RagGagA11B.1.1.5280.004808
ORF1ab/nsp8190R190del1aGga-g11B.1.1.70.000001
ORF1ab/nsp8190R190LAGGTTA11B.1.1.70.000001
ORF1ab/nsp8190R190KaGgaAg11B.1.1.700.000341
ORF1ab/nsp8190R190RagGagA11B.1.1.710.006061
ORF1ab/nsp8190R190RagGagA11B.1.1100.004525
ORF1ab/nsp8190R190MaGgaTg11B.1.1570.002985
ORF1ab/nsp8190R190SagGagT11B.1.1600.000031
ORF1ab/nsp8190R190RagGagA11B.1.160.70.002079
ORF1ab/nsp8190R190KaGgaAg11B.1.160.90.007194
ORF1ab/nsp8190R190KaGgaAg11B.1.1770.000013
ORF1ab/nsp8190R190delAGG---11B.1.1770.000013
ORF1ab/nsp8190R190SagGagT11B.1.1770.000013
ORF1ab/nsp8190R190KaGgaAg11B.1.177.440.000519
ORF1ab/nsp8190R190RagGagA11B.1.177.540.000606
ORF1ab/nsp8190R190RagGagA11B.1.177.810.000189
ORF1ab/nsp8190R190SagGagT11B.1.20.000009
ORF1ab/nsp8190R190KaGgaAg11B.1.2980.002114
ORF1ab/nsp8190R190RagGagA11B.1.3110.000275
ORF1ab/nsp8190R190RagGagA11B.1.3200.001245
ORF1ab/nsp8190R190RagGagA11B.1.360.000146
ORF1ab/nsp8190R190RAggCgg11B.1.4110.003704
ORF1ab/nsp8190R190KaGgaAg11B.1.4270.00005
ORF1ab/nsp8190R190RagGagA11B.1.4360.001029
ORF1ab/nsp8190R190RagGagA11B.1.466.20.000391
ORF1ab/nsp8190R190RagGagA11B.1.4710.002732
ORF1ab/nsp8190R190MaGgaTg11B.1.4790.038462
ORF1ab/nsp8190R190GAggGgg11B.1.5820.000491
ORF1ab/nsp8190R190RagGagA11B.1.5960.000087
ORF1ab/nsp8190R190RagGagA11B.1.617.10.000129
ORF1ab/nsp8190R190KaGgaAg11B.1.617.20.000004
ORF1ab/nsp8190R190RagGagA11B.550.00295
ORF1ab/nsp8190R190RagGagA11C.1.20.004255
ORF1ab/nsp8190R190RagGagA11C.140.004329
ORF1ab/nsp8190R190GAggGgg11D.20.000075
ORF1ab/nsp8190R190RagGagA11D.20.000075
ORF1ab/nsp8190R190RagGagA11N.40.004255
ORF1ab/nsp8190R190delAGG---11N.40.004255
ORF1ab/nsp8190R190RagGagA11N.50.001767
ORF1ab/nsp8190R190KaGgaAg11P.1.140.000048
ORF1ab/nsp8190R190RAggCgg11Q.10.000126
ORF1ab/nsp8190R190RagGagA11Q.80.000165