CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 160

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8160V160IV4102InonsynGtaAta8478450.99763912569-12571
ORF1ab/nsp8160V160IV4102InonsynGtAAtT84720.0023612812569-12571
ORF1ab/nsp8160V160VV4102VsyngtAgtG3102590.83548412569-12571
ORF1ab/nsp8160V160VV4102VsyngtAgtT310500.1612912569-12571
ORF1ab/nsp8160V160VV4102VsyngtAgtC31010.0032258112569-12571
ORF1ab/nsp8160V160LV4102LnonsynGtaTta1801760.97777812569-12571
ORF1ab/nsp8160V160LV4102LnonsynGtaCta18040.022222212569-12571
ORF1ab/nsp8160V160AV4102AnonsyngTagCa2424112569-12571
ORF1ab/nsp8160V160delV4102deldelGTA---1111112569-12571
ORF1ab/nsp8160V160del1V4102del1delgTag-a320.66666712569-12571
ORF1ab/nsp8160V160del1V4102del1delGta-ta310.33333312569-12571
ORF1ab/nsp8160V160FV4102FnonsynGtATtT22112569-12571
ORF1ab/nsp8160V160GV4102GnonsyngTagGa22112569-12571
ORF1ab/nsp8160V160CV4102CnonsynGTATGT11112569-12571
ORF1ab/nsp8160V160EV4102EnonsyngTagAa11112569-12571

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8160V160IGtaAta845847All0.000162
ORF1ab/nsp8160V160IGtAAtT2847All0
ORF1ab/nsp8160V160VgtAgtG259310All0.00005
ORF1ab/nsp8160V160VgtAgtT50310All0.00001
ORF1ab/nsp8160V160VgtAgtC1310All0
ORF1ab/nsp8160V160LGtaTta176180All0.000034
ORF1ab/nsp8160V160LGtaCta4180All0.000001
ORF1ab/nsp8160V160IGtaAta167167B.1.617.20.000629
ORF1ab/nsp8160V160IGtaAta132132B.1.6320.885906
ORF1ab/nsp8160V160IGtaAta7474AY.1020.001962
ORF1ab/nsp8160V160IGtaAta6666AY.430.000292
ORF1ab/nsp8160V160VgtAgtG6464AY.30.000637
ORF1ab/nsp8160V160IGtaAta5151AY.1030.000317
ORF1ab/nsp8160V160IGtaAta4747AY.40.000073
ORF1ab/nsp8160V160VgtAgtT4142AY.330.002738
ORF1ab/nsp8160V160VgtAgtG142AY.330.000067
ORF1ab/nsp8160V160LGtaTta3434AY.640.020238
ORF1ab/nsp8160V160LGtaTta2828AY.1110.005128
ORF1ab/nsp8160V160VgtAgtG2627B.1.1.70.000023
ORF1ab/nsp8160V160VgtAgtT127B.1.1.70.000001
ORF1ab/nsp8160V160LGtaTta2727B.1.617.20.000102
ORF1ab/nsp8160V160IGtaAta2626AY.1180.001629
ORF1ab/nsp8160V160IGtaAta2525AY.30.000249
ORF1ab/nsp8160V160VgtAgtG2525AY.40.000039
ORF1ab/nsp8160V160AgTagCa2424All0.000005
ORF1ab/nsp8160V160VgtAgtG2424B.1.617.20.00009
ORF1ab/nsp8160V160LGtaTta2021B.1.1.70.000018
ORF1ab/nsp8160V160LGtaCta121B.1.1.70.000001
ORF1ab/nsp8160V160VgtAgtG2121B.1.20.000185
ORF1ab/nsp8160V160IGtaAta2020AY.250.00012
ORF1ab/nsp8160V160IGtaAta2020AY.440.000122
ORF1ab/nsp8160V160LGtaTta1717AY.10.006727
ORF1ab/nsp8160V160IGtaAta1616AY.390.000395
ORF1ab/nsp8160V160VgtAgtG1616AY.98.10.000775
ORF1ab/nsp8160V160IGtaAta1616B.1.1.70.000014
ORF1ab/nsp8160V160IGtaAta1515B.1.2210.001065
ORF1ab/nsp8160V160IGtaAta1212AY.260.00034
ORF1ab/nsp8160V160delGTA---1111All0.000002
ORF1ab/nsp8160V160VgtAgtG1111AY.430.000049
ORF1ab/nsp8160V160VgtAgtG1111B.1.10.0002
ORF1ab/nsp8160V160IGtaAta1010AY.330.000668
ORF1ab/nsp8160V160LGtaTta99AY.40.000014
ORF1ab/nsp8160V160AgTagCa88AY.40.000012
ORF1ab/nsp8160V160IGtaAta88B.1.20.00007
ORF1ab/nsp8160V160VgtAgtG77B.1.438.10.000751
ORF1ab/nsp8160V160IGtaAta77B.1.6190.006098
ORF1ab/nsp8160V160IGtaAta66AY.1200.000223
ORF1ab/nsp8160V160VgtAgtG66B.450.022989
ORF1ab/nsp8160V160VgtAgtG55AY.200.000194
ORF1ab/nsp8160V160IGtaAta55AY.290.000079
ORF1ab/nsp8160V160IGtaAta55AY.4.50.000537
ORF1ab/nsp8160V160AgTagCa55B.1.20.000044
ORF1ab/nsp8160V160VgtAgtT440.222222
ORF1ab/nsp8160V160LGtaTta44AY.1020.000106
ORF1ab/nsp8160V160IGtaAta44AY.200.000155
ORF1ab/nsp8160V160IGtaAta44AY.230.000279
ORF1ab/nsp8160V160LGtaTta44AY.430.000018
ORF1ab/nsp8160V160IGtaAta44AY.460.000416
ORF1ab/nsp8160V160IGtaAta44AY.50.000083
ORF1ab/nsp8160V160IGtaAta44B.1.1.500.002716
ORF1ab/nsp8160V160IGtaAta44B.1.1770.000053
ORF1ab/nsp8160V160IGtaAta44P.10.000063
ORF1ab/nsp8160V160del1gTag-a23All0
ORF1ab/nsp8160V160del1Gta-ta13All0
ORF1ab/nsp8160V160IGtaAta33AY.100.00159
ORF1ab/nsp8160V160IGtaAta33AY.1090.002219
ORF1ab/nsp8160V160IGtaAta33AY.1170.000254
ORF1ab/nsp8160V160LGtaTta33AY.250.000018
ORF1ab/nsp8160V160IGtaAta33AY.4.20.000065
ORF1ab/nsp8160V160LGtaTta33AY.450.000365
ORF1ab/nsp8160V160VgtAgtG33AY.5.30.001012
ORF1ab/nsp8160V160IGtaAta33B.10.000027
ORF1ab/nsp8160V160AgTagCa33B.10.000027
ORF1ab/nsp8160V160delGTA---33B.1.1.70.000003
ORF1ab/nsp8160V160IGtaAta33B.1.4290.000071
ORF1ab/nsp8160V160LGtaCta220.111111
ORF1ab/nsp8160V160FGtATtT220.111111
ORF1ab/nsp8160V160IGtAAtT220.111111
ORF1ab/nsp8160V160del1gTag-a220.111111
ORF1ab/nsp8160V160VgtAgtG22AA.70.018349
ORF1ab/nsp8160V160FGtATtT22All0
ORF1ab/nsp8160V160GgTagGa22All0
ORF1ab/nsp8160V160LGtaTta22AY.1030.000012
ORF1ab/nsp8160V160IGtaAta22AY.1080.002205
ORF1ab/nsp8160V160IGtaAta22AY.1140.000462
ORF1ab/nsp8160V160delGTA---22AY.250.000012
ORF1ab/nsp8160V160VgtAgtT12AY.250.000006
ORF1ab/nsp8160V160VgtAgtG12AY.250.000006
ORF1ab/nsp8160V160LGtaTta22AY.280.003781
ORF1ab/nsp8160V160IGtaAta22AY.300.000791
ORF1ab/nsp8160V160IGtaAta22AY.420.00008
ORF1ab/nsp8160V160VgtAgtG22AY.420.00008
ORF1ab/nsp8160V160IGtaAta22AY.450.000243
ORF1ab/nsp8160V160IGtaAta22AY.46.60.000144
ORF1ab/nsp8160V160IGtaAta22AY.470.000062
ORF1ab/nsp8160V160IGtaAta22AY.490.00639
ORF1ab/nsp8160V160IGtaAta22AY.550.001835
ORF1ab/nsp8160V160IGtaAta22AY.750.000112
ORF1ab/nsp8160V160IGtaAta22AY.840.000875
ORF1ab/nsp8160V160IGtaAta22AY.90.000135
ORF1ab/nsp8160V160IGtaAta22AY.950.001522
ORF1ab/nsp8160V160IGtaAta22AY.99.20.000184
ORF1ab/nsp8160V160LGtaCta12B.10.000009
ORF1ab/nsp8160V160LGtaTta12B.10.000009
ORF1ab/nsp8160V160IGtaAta22B.1.10.000036
ORF1ab/nsp8160V160LGtaTta22B.1.1.280.000622
ORF1ab/nsp8160V160AgTagCa22B.1.1.70.000002
ORF1ab/nsp8160V160IGtaAta22B.1.2340.000264
ORF1ab/nsp8160V160IGtaAta22B.1.2810.043478
ORF1ab/nsp8160V160VgtAgtG22B.1.4290.000047
ORF1ab/nsp8160V160IGtaAta22B.1.4990.002101
ORF1ab/nsp8160V160VgtAgtG22B.1.5990.007299
ORF1ab/nsp8160V160IGtaAta22B.1.6230.001073
ORF1ab/nsp8160V160VgtAgtG22P.20.000373
ORF1ab/nsp8160V160CGTATGT11All0
ORF1ab/nsp8160V160EgTagAa11All0
ORF1ab/nsp8160V160EgTagAa11AU.20.002421
ORF1ab/nsp8160V160IGtaAta11AY.1000.000046
ORF1ab/nsp8160V160AgTagCa11AY.1030.000006
ORF1ab/nsp8160V160VgtAgtT11AY.1060.000335
ORF1ab/nsp8160V160IGtaAta11AY.1110.000183
ORF1ab/nsp8160V160LGtaTta11AY.1160.000287
ORF1ab/nsp8160V160VgtAgtG11AY.120.000316
ORF1ab/nsp8160V160LGtaTta11AY.120.000316
ORF1ab/nsp8160V160IGtaAta11AY.240.000431
ORF1ab/nsp8160V160VgtAgtG11AY.260.000028
ORF1ab/nsp8160V160VgtAgtG11AY.320.000532
ORF1ab/nsp8160V160IGtaAta11AY.34.10.00051
ORF1ab/nsp8160V160VgtAgtG11AY.360.000148
ORF1ab/nsp8160V160LGtaTta11AY.390.000025
ORF1ab/nsp8160V160VgtAgtT11AY.390.000025
ORF1ab/nsp8160V160VgtAgtG11AY.4.20.000022
ORF1ab/nsp8160V160AgTagCa11AY.440.000006
ORF1ab/nsp8160V160VgtAgtG11AY.440.000006
ORF1ab/nsp8160V160VgtAgtG11AY.450.000122
ORF1ab/nsp8160V160LGtaTta11AY.460.000104
ORF1ab/nsp8160V160IGtaAta11AY.46.20.000635
ORF1ab/nsp8160V160delGTA---11AY.46.20.000635
ORF1ab/nsp8160V160IGtaAta11AY.5.40.000277
ORF1ab/nsp8160V160VgtAgtG11AY.530.000288
ORF1ab/nsp8160V160VgtAgtG11AY.560.001605
ORF1ab/nsp8160V160LGtaTta11AY.590.00053
ORF1ab/nsp8160V160VgtAgtG11AY.600.000938
ORF1ab/nsp8160V160IGtaAta11AY.610.000105
ORF1ab/nsp8160V160LGtaTta11AY.670.000464
ORF1ab/nsp8160V160IGtaAta11AY.680.000274
ORF1ab/nsp8160V160LGtaTta11AY.700.000209
ORF1ab/nsp8160V160IGtaAta11AY.700.000209
ORF1ab/nsp8160V160delGTA---11AY.750.000056
ORF1ab/nsp8160V160VgtAgtG11AY.75.10.00018
ORF1ab/nsp8160V160VgtAgtG11AY.80.000606
ORF1ab/nsp8160V160VgtAgtG11AY.870.000833
ORF1ab/nsp8160V160VgtAgtG11AY.90.000068
ORF1ab/nsp8160V160LGtaTta11AY.9.10.000084
ORF1ab/nsp8160V160IGtaAta11AY.900.000684
ORF1ab/nsp8160V160IGtaAta11AY.98.10.000048
ORF1ab/nsp8160V160IGtaAta11B0.000128
ORF1ab/nsp8160V160GgTagGa11B0.000128
ORF1ab/nsp8160V160VgtAgtG11B.10.000009
ORF1ab/nsp8160V160delGTA---11B.10.000009
ORF1ab/nsp8160V160LGtaTta11B.1.10.000018
ORF1ab/nsp8160V160IGtaAta11B.1.1.2160.00089
ORF1ab/nsp8160V160delGTA---11B.1.1.280.000311
ORF1ab/nsp8160V160IGtaAta11B.1.1.3180.000302
ORF1ab/nsp8160V160IGtaAta11B.1.1.370.000193
ORF1ab/nsp8160V160IGtaAta11B.1.1.4200.001006
ORF1ab/nsp8160V160AgTagCa11B.1.1.4330.001425
ORF1ab/nsp8160V160VgtAgtG11B.1.1.4860.001577
ORF1ab/nsp8160V160IGtaAta11B.1.1.5190.00004
ORF1ab/nsp8160V160AgTagCa11B.1.1.5190.00004
ORF1ab/nsp8160V160GgTagGa11B.1.1.70.000001
ORF1ab/nsp8160V160CGTATGT11B.1.1.70.000001
ORF1ab/nsp8160V160AgTagCa11B.1.1600.000031
ORF1ab/nsp8160V160AgTagCa11B.1.1770.000013
ORF1ab/nsp8160V160IGtaAta11B.1.177.770.000726
ORF1ab/nsp8160V160LGtaTta11B.1.20.000009
ORF1ab/nsp8160V160IGtaAta11B.1.2230.002778
ORF1ab/nsp8160V160LGtaTta11B.1.2390.001221
ORF1ab/nsp8160V160VgtAgtG11B.1.2400.000216
ORF1ab/nsp8160V160VgtAgtG11B.1.2430.00007
ORF1ab/nsp8160V160IGtaAta11B.1.2580.000067
ORF1ab/nsp8160V160LGtaTta11B.1.2600.003344
ORF1ab/nsp8160V160VgtAgtG11B.1.3110.000275
ORF1ab/nsp8160V160IGtaAta11B.1.3440.008197
ORF1ab/nsp8160V160IGtaAta11B.1.3510.00003
ORF1ab/nsp8160V160VgtAgtG11B.1.360.000146
ORF1ab/nsp8160V160VgtAgtG11B.1.36.170.000494
ORF1ab/nsp8160V160VgtAgtG11B.1.36.180.00042
ORF1ab/nsp8160V160IGtaAta11B.1.3750.00082
ORF1ab/nsp8160V160del1Gta-ta11B.1.4090.000781
ORF1ab/nsp8160V160IGtaAta11B.1.4270.00005
ORF1ab/nsp8160V160LGtaTta11B.1.466.20.000391
ORF1ab/nsp8160V160LGtaTta11B.1.5090.000866
ORF1ab/nsp8160V160IGtaAta11B.1.5230.002451
ORF1ab/nsp8160V160VgtAgtG11B.1.5260.000024
ORF1ab/nsp8160V160IGtaAta11B.1.5500.013699
ORF1ab/nsp8160V160VgtAgtG11B.1.5650.00081
ORF1ab/nsp8160V160IGtaAta11B.1.5820.000491
ORF1ab/nsp8160V160LGtaTta11B.1.5950.000261
ORF1ab/nsp8160V160LGtaTta11B.1.595.10.005848
ORF1ab/nsp8160V160IGtaAta11B.1.5960.000087
ORF1ab/nsp8160V160IGtaAta11B.1.617.10.000129
ORF1ab/nsp8160V160VgtAgtG11B.1.617.10.000129
ORF1ab/nsp8160V160LGtaTta11B.1.6210.000089
ORF1ab/nsp8160V160VgtAgtG11B.1.621.10.000506
ORF1ab/nsp8160V160IGtaAta11B.1.6250.002353
ORF1ab/nsp8160V160VgtAgtG11B.1.6280.000352
ORF1ab/nsp8160V160IGtaAta11B.1.6280.000352
ORF1ab/nsp8160V160LGtaTta11B.1.6370.000073
ORF1ab/nsp8160V160IGtaAta11B.30.000831
ORF1ab/nsp8160V160delGTA---11B.340.013699
ORF1ab/nsp8160V160IGtaAta11C.360.000911
ORF1ab/nsp8160V160LGtaTta11C.370.000116
ORF1ab/nsp8160V160VgtAgtT11D.20.000075
ORF1ab/nsp8160V160delGTA---11N.40.004255
ORF1ab/nsp8160V160VgtAgtG11P.10.000016
ORF1ab/nsp8160V160LGtaTta11P.10.000016
ORF1ab/nsp8160V160VgtAgtC11P.1.20.001156