CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 158

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8158Q158HQ4100HnonsyncaGcaT272827140.99486812563-12565
ORF1ab/nsp8158Q158HQ4100HnonsyncaGcaC2728140.0051319712563-12565
ORF1ab/nsp8158Q158QQ4100QsyncaGcaA286286112563-12565
ORF1ab/nsp8158Q158RQ4100RnonsyncAgcGg3535112563-12565
ORF1ab/nsp8158Q158XQ4100XnonsynCagTag1111112563-12565
ORF1ab/nsp8158Q158delQ4100deldelCAG---1111112563-12565
ORF1ab/nsp8158Q158LQ4100LnonsyncAgcTg1180.72727312563-12565
ORF1ab/nsp8158Q158LQ4100LnonsynCAgTTg1110.090909112563-12565
ORF1ab/nsp8158Q158LQ4100LnonsyncAGcTT1110.090909112563-12565
ORF1ab/nsp8158Q158LQ4100LnonsyncAGcTA1110.090909112563-12565
ORF1ab/nsp8158Q158YQ4100YnonsynCaGTaT530.612563-12565
ORF1ab/nsp8158Q158YQ4100YnonsynCaGTaC520.412563-12565
ORF1ab/nsp8158Q158KQ4100KnonsynCagAag22112563-12565
ORF1ab/nsp8158Q158CQ4100CnonsynCAGTGT22112563-12565
ORF1ab/nsp8158Q158EQ4100EnonsynCagGag11112563-12565
ORF1ab/nsp8158Q158del1Q4100del1delcAgc-g11112563-12565
ORF1ab/nsp8158Q158PQ4100PnonsyncAgcCg11112563-12565

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8158Q158HcaGcaT27142728All0.000519
ORF1ab/nsp8158Q158HcaGcaC142728All0.000003
ORF1ab/nsp8158Q158HcaGcaT16191619AY.1030.010052
ORF1ab/nsp8158Q158HcaGcaT445445B.1.177.200.675266
ORF1ab/nsp8158Q158QcaGcaA286286All0.000055
ORF1ab/nsp8158Q158QcaGcaA197197AY.40.000307
ORF1ab/nsp8158Q158HcaGcaT8587B.1.617.20.00032
ORF1ab/nsp8158Q158HcaGcaC287B.1.617.20.000008
ORF1ab/nsp8158Q158HcaGcaT6565B.1.6210.005754
ORF1ab/nsp8158Q158HcaGcaT4243B.1.1.70.000038
ORF1ab/nsp8158Q158HcaGcaC143B.1.1.70.000001
ORF1ab/nsp8158Q158HcaGcaT4141AY.40.000064
ORF1ab/nsp8158Q158HcaGcaT3737AY.440.000225
ORF1ab/nsp8158Q158HcaGcaT3636AY.610.003772
ORF1ab/nsp8158Q158RcAgcGg3535All0.000007
ORF1ab/nsp8158Q158HcaGcaT2224AY.430.000097
ORF1ab/nsp8158Q158HcaGcaC224AY.430.000009
ORF1ab/nsp8158Q158HcaGcaT2424B.1.20.000211
ORF1ab/nsp8158Q158HcaGcaT2020B.10.000183
ORF1ab/nsp8158Q158HcaGcaT2020B.1.1.1980.029369
ORF1ab/nsp8158Q158QcaGcaA2020B.1.1.70.000018
ORF1ab/nsp8158Q158HcaGcaT1818AY.290.000284
ORF1ab/nsp8158Q158HcaGcaT1717AY.250.000102
ORF1ab/nsp8158Q158HcaGcaT1717B.1.360.00248
ORF1ab/nsp8158Q158HcaGcaT1313B.1.10.000236
ORF1ab/nsp8158Q158QcaGcaA1313B.1.617.20.000049
ORF1ab/nsp8158Q158HcaGcaT1313B.390.030303
ORF1ab/nsp8158Q158delCAG---1111All0.000002
ORF1ab/nsp8158Q158XCagTag1111All0.000002
ORF1ab/nsp8158Q158LcAgcTg811All0.000002
ORF1ab/nsp8158Q158LCAgTTg111All0
ORF1ab/nsp8158Q158LcAGcTA111All0
ORF1ab/nsp8158Q158LcAGcTT111All0
ORF1ab/nsp8158Q158HcaGcaT1111AY.270.000712
ORF1ab/nsp8158Q158QcaGcaA1010AY.430.000044
ORF1ab/nsp8158Q158HcaGcaT99AY.1000.000414
ORF1ab/nsp8158Q158RcAgcGg99AY.40.000014
ORF1ab/nsp8158Q158HcaGcaT88B.1.1600.00025
ORF1ab/nsp8158Q158HcaGcaT88B.1.5260.000188
ORF1ab/nsp8158Q158QcaGcaA77AY.4.20.000152
ORF1ab/nsp8158Q158HcaGcaT77AY.470.000218
ORF1ab/nsp8158Q158QcaGcaA77B.1.2430.000487
ORF1ab/nsp8158Q158RcAgcGg66B.1.1.70.000005
ORF1ab/nsp8158Q158HcaGcaC46P.10.000063
ORF1ab/nsp8158Q158HcaGcaT26P.10.000032
ORF1ab/nsp8158Q158YCaGTaT35All0.000001
ORF1ab/nsp8158Q158YCaGTaC25All0
ORF1ab/nsp8158Q158HcaGcaT55AY.1210.000677
ORF1ab/nsp8158Q158RcAgcGg55AY.250.00003
ORF1ab/nsp8158Q158HcaGcaT55B.1.2430.000348
ORF1ab/nsp8158Q158YCaGTaC240.111111
ORF1ab/nsp8158Q158YCaGTaT240.111111
ORF1ab/nsp8158Q158HcaGcaT44AY.1020.000106
ORF1ab/nsp8158Q158HcaGcaT44AY.1180.000251
ORF1ab/nsp8158Q158HcaGcaT44AY.30.00004
ORF1ab/nsp8158Q158HcaGcaT44AY.330.000267
ORF1ab/nsp8158Q158HcaGcaT44AY.4.20.000087
ORF1ab/nsp8158Q158HcaGcaT44AY.4.50.00043
ORF1ab/nsp8158Q158HcaGcaT44B.1.1.3370.014388
ORF1ab/nsp8158Q158HcaGcaT44B.1.1.5190.000159
ORF1ab/nsp8158Q158HcaGcaT44B.1.1340.021858
ORF1ab/nsp8158Q158HcaGcaT44B.1.1770.000053
ORF1ab/nsp8158Q158HcaGcaT44C.370.000464
ORF1ab/nsp8158Q158HcaGcaT33AY.1200.000112
ORF1ab/nsp8158Q158HcaGcaT33AY.230.000209
ORF1ab/nsp8158Q158HcaGcaT33AY.260.000085
ORF1ab/nsp8158Q158RcAgcGg33AY.60.000123
ORF1ab/nsp8158Q158QcaGcaA33B.1.1.1340.034091
ORF1ab/nsp8158Q158HcaGcaT33B.1.1.3540.013158
ORF1ab/nsp8158Q158HcaGcaT33B.1.36.360.001806
ORF1ab/nsp8158Q158HcaGcaT33B.1.3750.002459
ORF1ab/nsp8158Q158HcaGcaT33B.1.5070.033708
ORF1ab/nsp8158Q158HcaGcaT33D.20.000225
ORF1ab/nsp8158Q158LcAgcTg220.111111
ORF1ab/nsp8158Q158KCagAag220.111111
ORF1ab/nsp8158Q158CCAGTGT220.111111
ORF1ab/nsp8158Q158CCAGTGT22All0
ORF1ab/nsp8158Q158KCagAag22All0
ORF1ab/nsp8158Q158HcaGcaT22AY.1160.000574
ORF1ab/nsp8158Q158HcaGcaT22AY.200.000078
ORF1ab/nsp8158Q158delCAG---22AY.250.000012
ORF1ab/nsp8158Q158QcaGcaA22AY.330.000134
ORF1ab/nsp8158Q158HcaGcaT22AY.360.000296
ORF1ab/nsp8158Q158HcaGcaT22AY.390.000049
ORF1ab/nsp8158Q158QcaGcaA22AY.4.50.000215
ORF1ab/nsp8158Q158QcaGcaA22AY.46.40.000329
ORF1ab/nsp8158Q158QcaGcaA22AY.470.000062
ORF1ab/nsp8158Q158HcaGcaT22AY.50.000041
ORF1ab/nsp8158Q158HcaGcaT22AY.710.00095
ORF1ab/nsp8158Q158HcaGcaT12AY.75.10.00018
ORF1ab/nsp8158Q158HcaGcaC12AY.75.10.00018
ORF1ab/nsp8158Q158HcaGcaT22AY.950.001522
ORF1ab/nsp8158Q158XCagTag22B.10.000018
ORF1ab/nsp8158Q158QcaGcaA22B.10.000018
ORF1ab/nsp8158Q158HcaGcaC22B.1.1.2650.006309
ORF1ab/nsp8158Q158XCagTag22B.1.1.70.000002
ORF1ab/nsp8158Q158delCAG---22B.1.1.70.000002
ORF1ab/nsp8158Q158HcaGcaT22B.1.177.810.000379
ORF1ab/nsp8158Q158RcAgcGg22B.1.3510.000059
ORF1ab/nsp8158Q158HcaGcaT22B.1.4270.000101
ORF1ab/nsp8158Q158HcaGcaT22B.1.4290.000047
ORF1ab/nsp8158Q158QcaGcaA22B.1.617.10.000258
ORF1ab/nsp8158Q158HcaGcaT22B.400.000729
ORF1ab/nsp8158Q158HcaGcaT11A0.000387
ORF1ab/nsp8158Q158del1cAgc-g11All0
ORF1ab/nsp8158Q158ECagGag11All0
ORF1ab/nsp8158Q158PcAgcCg11All0
ORF1ab/nsp8158Q158RcAgcGg11AY.1030.000006
ORF1ab/nsp8158Q158HcaGcaT11AY.110.001339
ORF1ab/nsp8158Q158HcaGcaT11AY.1100.000113
ORF1ab/nsp8158Q158HcaGcaT11AY.1110.000183
ORF1ab/nsp8158Q158LcAgcTg11AY.1180.000063
ORF1ab/nsp8158Q158QcaGcaA11AY.120.20.001285
ORF1ab/nsp8158Q158HcaGcaT11AY.130.000161
ORF1ab/nsp8158Q158QcaGcaA11AY.200.000039
ORF1ab/nsp8158Q158XCagTag11AY.250.000006
ORF1ab/nsp8158Q158QcaGcaA11AY.250.000006
ORF1ab/nsp8158Q158LcAgcTg11AY.250.000006
ORF1ab/nsp8158Q158RcAgcGg11AY.260.000028
ORF1ab/nsp8158Q158QcaGcaA11AY.290.000016
ORF1ab/nsp8158Q158QcaGcaA11AY.29.10.000221
ORF1ab/nsp8158Q158HcaGcaT11AY.340.000097
ORF1ab/nsp8158Q158HcaGcaT11AY.39.10.00004
ORF1ab/nsp8158Q158HcaGcaT11AY.4.40.000409
ORF1ab/nsp8158Q158LCAgTTg11AY.440.000006
ORF1ab/nsp8158Q158QcaGcaA11AY.440.000006
ORF1ab/nsp8158Q158HcaGcaT11AY.450.000122
ORF1ab/nsp8158Q158delCAG---11AY.46.20.000635
ORF1ab/nsp8158Q158RcAgcGg11AY.470.000031
ORF1ab/nsp8158Q158HcaGcaT11AY.5.40.000277
ORF1ab/nsp8158Q158QcaGcaA11AY.610.000105
ORF1ab/nsp8158Q158HcaGcaT11AY.670.000464
ORF1ab/nsp8158Q158QcaGcaA11AY.730.000665
ORF1ab/nsp8158Q158HcaGcaT11AY.740.000116
ORF1ab/nsp8158Q158QcaGcaA11AY.750.000056
ORF1ab/nsp8158Q158delCAG---11AY.750.000056
ORF1ab/nsp8158Q158QcaGcaA11AY.75.10.00018
ORF1ab/nsp8158Q158HcaGcaT11AY.9.20.000037
ORF1ab/nsp8158Q158RcAgcGg11AY.900.000684
ORF1ab/nsp8158Q158HcaGcaT11B0.000128
ORF1ab/nsp8158Q158RcAgcGg11B.10.000009
ORF1ab/nsp8158Q158delCAG---11B.10.000009
ORF1ab/nsp8158Q158RcAgcGg11B.1.10.000018
ORF1ab/nsp8158Q158LcAGcTT11B.1.10.000018
ORF1ab/nsp8158Q158LcAgcTg11B.1.1.2080.012195
ORF1ab/nsp8158Q158QcaGcaA11B.1.1.2160.00089
ORF1ab/nsp8158Q158delCAG---11B.1.1.280.000311
ORF1ab/nsp8158Q158XCagTag11B.1.1.280.000311
ORF1ab/nsp8158Q158HcaGcaT11B.1.1.3260.001761
ORF1ab/nsp8158Q158HcaGcaT11B.1.1.390.00051
ORF1ab/nsp8158Q158ECagGag11B.1.1.4860.001577
ORF1ab/nsp8158Q158QcaGcaA11B.1.1.630.000386
ORF1ab/nsp8158Q158LcAgcTg11B.1.1.70.000001
ORF1ab/nsp8158Q158YCaGTaT11B.1.1.70.000001
ORF1ab/nsp8158Q158del1cAgc-g11B.1.1.70.000001
ORF1ab/nsp8158Q158XCagTag11B.1.1600.000031
ORF1ab/nsp8158Q158QcaGcaA11B.1.160.160.000929
ORF1ab/nsp8158Q158HcaGcaT11B.1.160.310.008065
ORF1ab/nsp8158Q158HcaGcaC11B.1.177.210.000076
ORF1ab/nsp8158Q158HcaGcaT11B.1.177.600.000218
ORF1ab/nsp8158Q158HcaGcaT11B.1.177.820.000477
ORF1ab/nsp8158Q158RcAgcGg11B.1.1790.003759
ORF1ab/nsp8158Q158XCagTag11B.1.20.000009
ORF1ab/nsp8158Q158QcaGcaA11B.1.20.000009
ORF1ab/nsp8158Q158XCagTag11B.1.2210.000071
ORF1ab/nsp8158Q158QcaGcaA11B.1.2370.004975
ORF1ab/nsp8158Q158HcaGcaT11B.1.2400.000216
ORF1ab/nsp8158Q158HcaGcaT11B.1.2580.000067
ORF1ab/nsp8158Q158HcaGcaT11B.1.258.170.000104
ORF1ab/nsp8158Q158HcaGcaT11B.1.258.70.001912
ORF1ab/nsp8158Q158HcaGcaT11B.1.3510.00003
ORF1ab/nsp8158Q158HcaGcaT11B.1.3690.000285
ORF1ab/nsp8158Q158HcaGcaT11B.1.3960.000706
ORF1ab/nsp8158Q158delCAG---11B.1.4090.000781
ORF1ab/nsp8158Q158PcAgcCg11B.1.4290.000024
ORF1ab/nsp8158Q158QcaGcaA11B.1.4590.004082
ORF1ab/nsp8158Q158LcAGcTA11B.1.5750.000303
ORF1ab/nsp8158Q158HcaGcaT11B.1.5770.000687
ORF1ab/nsp8158Q158HcaGcaC11B.1.5960.000087
ORF1ab/nsp8158Q158HcaGcaT11B.1.6090.000479
ORF1ab/nsp8158Q158RcAgcGg11B.1.617.20.000004
ORF1ab/nsp8158Q158XCagTag11B.1.617.20.000004
ORF1ab/nsp8158Q158HcaGcaT11B.1.6230.000536
ORF1ab/nsp8158Q158HcaGcaT11B.1.930.000934
ORF1ab/nsp8158Q158delCAG---11B.340.013699
ORF1ab/nsp8158Q158HcaGcaT11C.140.004329
ORF1ab/nsp8158Q158XCagTag11C.230.005814
ORF1ab/nsp8158Q158RcAgcGg11D.20.000075
ORF1ab/nsp8158Q158LcAgcTg11D.20.000075
ORF1ab/nsp8158Q158delCAG---11N.40.004255
ORF1ab/nsp8158Q158RcAgcGg11P.10.000016
ORF1ab/nsp8158Q158QcaGcaA11P.10.000016
ORF1ab/nsp8158Q158HcaGcaT11P.1.150.000232
ORF1ab/nsp8158Q158LcAgcTg11P.1.70.000319
ORF1ab/nsp8158Q158HcaGcaT11P.1.70.000319
ORF1ab/nsp8158Q158HcaGcaT11R.10.00009