CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 156

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8156I156II4098IsynatCatT242623490.96826112557-12559
ORF1ab/nsp8156I156II4098IsynatCatA2426770.031739512557-12559
ORF1ab/nsp8156I156VI4098VnonsynAtcGtc844844112557-12559
ORF1ab/nsp8156I156TI4098TnonsynaTcaCc2402390.99583312557-12559
ORF1ab/nsp8156I156TI4098TnonsynaTCaCG24010.0041666712557-12559
ORF1ab/nsp8156I156LI4098LnonsynAtcCtc9696112557-12559
ORF1ab/nsp8156I156delI4098deldelATC---1919112557-12559
ORF1ab/nsp8156I156NI4098NnonsynaTcaAc88112557-12559
ORF1ab/nsp8156I156FI4098FnonsynAtcTtc77112557-12559
ORF1ab/nsp8156I156del2I4098del2delATc--c530.612557-12559
ORF1ab/nsp8156I156del2I4098del2delATC--T520.412557-12559
ORF1ab/nsp8156I156MI4098MnonsynatCatG33112557-12559
ORF1ab/nsp8156I156del1I4098del1delAtc-tc320.66666712557-12559
ORF1ab/nsp8156I156SI4098SnonsynaTcaGc320.66666712557-12559
ORF1ab/nsp8156I156SI4098SnonsynATcTCc310.33333312557-12559
ORF1ab/nsp8156I156del1I4098del1delatCat-310.33333312557-12559
ORF1ab/nsp8156I156PI4098PnonsynATCCCA22112557-12559

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8156I156IatCatT23492426All0.000449
ORF1ab/nsp8156I156IatCatA772426All0.000015
ORF1ab/nsp8156I156VAtcGtc844844All0.000161
ORF1ab/nsp8156I156IatCatT491511AY.40.000764
ORF1ab/nsp8156I156IatCatA20511AY.40.000031
ORF1ab/nsp8156I156IatCatT348364B.1.1.70.000312
ORF1ab/nsp8156I156IatCatA16364B.1.1.70.000014
ORF1ab/nsp8156I156IatCatT348348AY.1130.049551
ORF1ab/nsp8156I156VAtcGtc325325B.1.1.70.000291
ORF1ab/nsp8156I156TaTcaCc239240All0.000046
ORF1ab/nsp8156I156TaTCaCG1240All0
ORF1ab/nsp8156I156IatCatT165169B.10.001511
ORF1ab/nsp8156I156IatCatA4169B.10.000037
ORF1ab/nsp8156I156VAtcGtc154154AY.99.20.014192
ORF1ab/nsp8156I156IatCatT111111B.1.1770.001462
ORF1ab/nsp8156I156LAtcCtc9696All0.000018
ORF1ab/nsp8156I156IatCatT8888AY.250.000529
ORF1ab/nsp8156I156IatCatT5362B.1.617.20.0002
ORF1ab/nsp8156I156IatCatA962B.1.617.20.000034
ORF1ab/nsp8156I156VAtcGtc5858A.190.54717
ORF1ab/nsp8156I156IatCatT5656B.1.10.001016
ORF1ab/nsp8156I156IatCatT5353B.1.4290.001247
ORF1ab/nsp8156I156IatCatT5252AY.390.001285
ORF1ab/nsp8156I156TaTcaCc4949AY.40.000076
ORF1ab/nsp8156I156IatCatT4849B.1.20.000423
ORF1ab/nsp8156I156IatCatA149B.1.20.000009
ORF1ab/nsp8156I156VAtcGtc4848B.461
ORF1ab/nsp8156I156IatCatT4646AY.1030.000286
ORF1ab/nsp8156I156LAtcCtc4343B.1.3410.977273
ORF1ab/nsp8156I156VAtcGtc3838B.1.5960.003311
ORF1ab/nsp8156I156IatCatT3232P.10.000504
ORF1ab/nsp8156I156IatCatT2828B.1.1.5190.001112
ORF1ab/nsp8156I156IatCatT2727B.1.1600.000842
ORF1ab/nsp8156I156IatCatT2626B.1.5650.02107
ORF1ab/nsp8156I156IatCatT2225AY.430.000097
ORF1ab/nsp8156I156IatCatA325AY.430.000013
ORF1ab/nsp8156I156VAtcGtc2424AY.40.000037
ORF1ab/nsp8156I156VAtcGtc2222AY.250.000132
ORF1ab/nsp8156I156TaTcaCc2020B.1.1.70.000018
ORF1ab/nsp8156I156delATC---1919All0.000004
ORF1ab/nsp8156I156TaTcaCc1819B.1.617.20.000068
ORF1ab/nsp8156I156TaTCaCG119B.1.617.20.000004
ORF1ab/nsp8156I156IatCatT1516B.1.1.2140.000832
ORF1ab/nsp8156I156IatCatA116B.1.1.2140.000055
ORF1ab/nsp8156I156TaTcaCc1616B.1.1.370.003086
ORF1ab/nsp8156I156IatCatT1515B.1.1.4160.013575
ORF1ab/nsp8156I156VAtcGtc1515B.1.20.000132
ORF1ab/nsp8156I156IatCatT1515B.1.5500.205479
ORF1ab/nsp8156I156VAtcGtc1414AY.10.00554
ORF1ab/nsp8156I156VAtcGtc1313B.1.617.20.000049
ORF1ab/nsp8156I156IatCatT1313W.40.017568
ORF1ab/nsp8156I156IatCatT1212AY.340.001164
ORF1ab/nsp8156I156LAtcCtc1212B.1.1.70.000011
ORF1ab/nsp8156I156IatCatT1212B.1.351.20.003631
ORF1ab/nsp8156I156VAtcGtc1111AY.1200.000409
ORF1ab/nsp8156I156IatCatT1111AY.50.000227
ORF1ab/nsp8156I156IatCatT1010AY.290.000158
ORF1ab/nsp8156I156IatCatT1010AY.420.000402
ORF1ab/nsp8156I156IatCatT910AY.440.000055
ORF1ab/nsp8156I156IatCatA110AY.440.000006
ORF1ab/nsp8156I156IatCatT99AY.450.001095
ORF1ab/nsp8156I156TaTcaCc99B.10.000082
ORF1ab/nsp8156I156VAtcGtc99B.1.1770.000119
ORF1ab/nsp8156I156IatCatT99B.1.2210.000639
ORF1ab/nsp8156I156TaTcaCc99B.1.2400.00194
ORF1ab/nsp8156I156IatCatA99B.1.3970.043689
ORF1ab/nsp8156I156NaTcaAc88All0.000002
ORF1ab/nsp8156I156TaTcaCc88AY.140.000704
ORF1ab/nsp8156I156IatCatT88AY.200.000311
ORF1ab/nsp8156I156TaTcaCc88AY.39.10.000317
ORF1ab/nsp8156I156LAtcCtc88B.1.3330.084211
ORF1ab/nsp8156I156FAtcTtc77All0.000001
ORF1ab/nsp8156I156IatCatT67AY.1190.000212
ORF1ab/nsp8156I156IatCatA17AY.1190.000035
ORF1ab/nsp8156I156TaTcaCc77AY.260.000198
ORF1ab/nsp8156I156TaTcaCc77AY.430.000031
ORF1ab/nsp8156I156TaTcaCc77AY.440.000043
ORF1ab/nsp8156I156TaTcaCc66AY.1030.000037
ORF1ab/nsp8156I156IatCatT66AY.1080.006615
ORF1ab/nsp8156I156IatCatT66AY.30.00006
ORF1ab/nsp8156I156VAtcGtc66AY.950.004566
ORF1ab/nsp8156I156VAtcGtc66B.10.000055
ORF1ab/nsp8156I156IatCatT66B.1.177.750.006243
ORF1ab/nsp8156I156IatCatT46B.1.3510.000119
ORF1ab/nsp8156I156IatCatA26B.1.3510.000059
ORF1ab/nsp8156I156IatCatT66B.1.5260.000141
ORF1ab/nsp8156I156TaTcaCc66B.1.617.10.000774
ORF1ab/nsp8156I156IatCatT66B.1.6370.000438
ORF1ab/nsp8156I156del2ATc--c35All0.000001
ORF1ab/nsp8156I156del2ATC--T25All0
ORF1ab/nsp8156I156IatCatT55AY.270.000324
ORF1ab/nsp8156I156IatCatT55AY.330.000334
ORF1ab/nsp8156I156LAtcCtc55B.1.1600.000156
ORF1ab/nsp8156I156IatCatT55B.1.2340.00066
ORF1ab/nsp8156I156TaTcaCc55B.1.4290.000118
ORF1ab/nsp8156I156IatCatT55B.1.6230.002682
ORF1ab/nsp8156I156IatCatT44AY.1020.000106
ORF1ab/nsp8156I156IatCatT44AY.240.001724
ORF1ab/nsp8156I156IatCatT44AY.4.20.000087
ORF1ab/nsp8156I156IatCatT44AY.46.60.000289
ORF1ab/nsp8156I156LAtcCtc44B.10.000037
ORF1ab/nsp8156I156IatCatT44B.1.1.1920.009238
ORF1ab/nsp8156I156TaTcaCc44B.1.1.4160.00362
ORF1ab/nsp8156I156TaTcaCc44B.1.1.5190.000159
ORF1ab/nsp8156I156FAtcTtc44B.1.1.70.000004
ORF1ab/nsp8156I156TaTcaCc44B.1.1770.000053
ORF1ab/nsp8156I156LAtcCtc44B.1.20.000035
ORF1ab/nsp8156I156IatCatT44B.1.2400.000862
ORF1ab/nsp8156I156VAtcGtc44B.1.2580.000266
ORF1ab/nsp8156I156IatCatA44B.1.3250.027586
ORF1ab/nsp8156I156VAtcGtc44B.1.4040.005208
ORF1ab/nsp8156I156IatCatT44C.36.30.002269
ORF1ab/nsp8156I156VAtcGtc44C.370.000464
ORF1ab/nsp8156I156VAtcGtc44P.1.150.000929
ORF1ab/nsp8156I156VAtcGtc33A0.001161
ORF1ab/nsp8156I156MatCatG33All0.000001
ORF1ab/nsp8156I156del1Atc-tc23All0
ORF1ab/nsp8156I156SaTcaGc23All0
ORF1ab/nsp8156I156SATcTCc13All0
ORF1ab/nsp8156I156del1atCat-13All0
ORF1ab/nsp8156I156IatCatT33AY.1170.000254
ORF1ab/nsp8156I156VAtcGtc33AY.200.000117
ORF1ab/nsp8156I156TaTcaCc33AY.250.000018
ORF1ab/nsp8156I156VAtcGtc33AY.30.00003
ORF1ab/nsp8156I156VAtcGtc33AY.390.000074
ORF1ab/nsp8156I156IatCatT33AY.39.10.000119
ORF1ab/nsp8156I156VAtcGtc33AY.39.10.000119
ORF1ab/nsp8156I156VAtcGtc33AY.440.000018
ORF1ab/nsp8156I156TaTcaCc33AY.50.000062
ORF1ab/nsp8156I156IatCatT33AY.750.000168
ORF1ab/nsp8156I156IatCatT33AY.880.002653
ORF1ab/nsp8156I156VAtcGtc33B.1.10.000054
ORF1ab/nsp8156I156IatCatT33B.1.1.4320.003797
ORF1ab/nsp8156I156IatCatT33B.1.1.670.013699
ORF1ab/nsp8156I156delATC---33B.1.1.70.000003
ORF1ab/nsp8156I156del2ATC--T23B.1.1.70.000002
ORF1ab/nsp8156I156del2ATc--c13B.1.1.70.000001
ORF1ab/nsp8156I156IatCatT33B.1.130.007126
ORF1ab/nsp8156I156VAtcGtc33B.1.1600.000094
ORF1ab/nsp8156I156TaTcaCc33B.1.20.000026
ORF1ab/nsp8156I156IatCatT33B.1.2430.000209
ORF1ab/nsp8156I156VAtcGtc33B.1.2430.000209
ORF1ab/nsp8156I156IatCatT33B.1.3610.003866
ORF1ab/nsp8156I156IatCatT33B.1.3750.002459
ORF1ab/nsp8156I156IatCatT33B.1.4090.002344
ORF1ab/nsp8156I156LAtcCtc33B.1.4460.06
ORF1ab/nsp8156I156delATC---220.111111
ORF1ab/nsp8156I156NaTcaAc220.111111
ORF1ab/nsp8156I156TaTcaCc220.111111
ORF1ab/nsp8156I156PATCCCA220.111111
ORF1ab/nsp8156I156IatCatT22AD.20.000438
ORF1ab/nsp8156I156IatCatT22AE.80.000978
ORF1ab/nsp8156I156PATCCCA22All0
ORF1ab/nsp8156I156TaTcaCc22AY.1020.000053
ORF1ab/nsp8156I156VAtcGtc22AY.1030.000012
ORF1ab/nsp8156I156VAtcGtc22AY.1130.000285
ORF1ab/nsp8156I156delATC---22AY.250.000012
ORF1ab/nsp8156I156LAtcCtc22AY.360.000296
ORF1ab/nsp8156I156LAtcCtc22AY.40.000003
ORF1ab/nsp8156I156VAtcGtc22AY.4.20.000043
ORF1ab/nsp8156I156VAtcGtc22AY.430.000009
ORF1ab/nsp8156I156IatCatT22AY.460.000208
ORF1ab/nsp8156I156TaTcaCc22AY.470.000062
ORF1ab/nsp8156I156IatCatT22AY.470.000062
ORF1ab/nsp8156I156IatCatT22AY.60.000082
ORF1ab/nsp8156I156delATC---22AY.750.000112
ORF1ab/nsp8156I156VAtcGtc22AY.790.002421
ORF1ab/nsp8156I156TaTcaCc22AY.90.000135
ORF1ab/nsp8156I156IatCatT12AY.98.10.000048
ORF1ab/nsp8156I156IatCatA12AY.98.10.000048
ORF1ab/nsp8156I156VAtcGtc22B0.000256
ORF1ab/nsp8156I156TaTcaCc22B.1.10.000036
ORF1ab/nsp8156I156TaTcaCc22B.1.1.2200.003717
ORF1ab/nsp8156I156IatCatT22B.1.1.2630.003115
ORF1ab/nsp8156I156TaTcaCc22B.1.1.3180.000604
ORF1ab/nsp8156I156IatCatT22B.1.177.600.000437
ORF1ab/nsp8156I156IatCatT22B.1.2060.001631
ORF1ab/nsp8156I156IatCatT22B.1.2410.001623
ORF1ab/nsp8156I156IatCatT22B.1.2580.000133
ORF1ab/nsp8156I156IatCatT22B.1.258.170.000208
ORF1ab/nsp8156I156TaTcaCc22B.1.36.290.001035
ORF1ab/nsp8156I156LAtcCtc22B.1.4090.001563
ORF1ab/nsp8156I156IatCatT22B.1.4270.000101
ORF1ab/nsp8156I156VAtcGtc22B.1.4270.000101
ORF1ab/nsp8156I156IatCatT22B.1.5090.001732
ORF1ab/nsp8156I156TaTcaCc22B.1.5260.000047
ORF1ab/nsp8156I156IatCatT22B.1.5960.000174
ORF1ab/nsp8156I156LAtcCtc22B.1.6210.000177
ORF1ab/nsp8156I156TaTcaCc22C.37.10.005236
ORF1ab/nsp8156I156IatCatT22P.20.000373
ORF1ab/nsp8156I156IatCatT11A.10.000282
ORF1ab/nsp8156I156VAtcGtc11A.20.000662
ORF1ab/nsp8156I156NaTcaAc11A.20.000662
ORF1ab/nsp8156I156IatCatT11A.2.50.000499
ORF1ab/nsp8156I156TaTcaCc11AY.1000.000046
ORF1ab/nsp8156I156IatCatT11AY.1050.000643
ORF1ab/nsp8156I156TaTcaCc11AY.1100.000113
ORF1ab/nsp8156I156LAtcCtc11AY.1130.000142
ORF1ab/nsp8156I156IatCatT11AY.1160.000287
ORF1ab/nsp8156I156LAtcCtc11AY.1180.000063
ORF1ab/nsp8156I156VAtcGtc11AY.1180.000063
ORF1ab/nsp8156I156IatCatT11AY.1180.000063
ORF1ab/nsp8156I156VAtcGtc11AY.1190.000035
ORF1ab/nsp8156I156IatCatT11AY.120.000316
ORF1ab/nsp8156I156del2ATc--c11AY.120.10.000321
ORF1ab/nsp8156I156VAtcGtc11AY.1210.000135
ORF1ab/nsp8156I156IatCatT11AY.260.000028
ORF1ab/nsp8156I156LAtcCtc11AY.260.000028
ORF1ab/nsp8156I156VAtcGtc11AY.260.000028
ORF1ab/nsp8156I156VAtcGtc11AY.290.000016
ORF1ab/nsp8156I156VAtcGtc11AY.300.000396
ORF1ab/nsp8156I156IatCatT11AY.320.000532
ORF1ab/nsp8156I156VAtcGtc11AY.330.000067
ORF1ab/nsp8156I156IatCatT11AY.360.000148
ORF1ab/nsp8156I156TaTcaCc11AY.390.000025
ORF1ab/nsp8156I156FAtcTtc11AY.40.000002
ORF1ab/nsp8156I156TaTcaCc11AY.4.50.000107
ORF1ab/nsp8156I156del2ATc--c11AY.4.50.000107
ORF1ab/nsp8156I156VAtcGtc11AY.420.00004
ORF1ab/nsp8156I156delATC---11AY.430.000004
ORF1ab/nsp8156I156SaTcaGc11AY.430.000004
ORF1ab/nsp8156I156FAtcTtc11AY.430.000004
ORF1ab/nsp8156I156SATcTCc11AY.440.000006
ORF1ab/nsp8156I156LAtcCtc11AY.440.000006
ORF1ab/nsp8156I156NaTcaAc11AY.440.000006
ORF1ab/nsp8156I156TaTcaCc11AY.460.000104
ORF1ab/nsp8156I156delATC---11AY.46.20.000635
ORF1ab/nsp8156I156IatCatA11AY.46.40.000165
ORF1ab/nsp8156I156IatCatT11AY.46.50.000198
ORF1ab/nsp8156I156NaTcaAc11AY.46.60.000072
ORF1ab/nsp8156I156VAtcGtc11AY.50.000021
ORF1ab/nsp8156I156IatCatT11AY.5.30.000337
ORF1ab/nsp8156I156VAtcGtc11AY.5.30.000337
ORF1ab/nsp8156I156IatCatT11AY.510.000909
ORF1ab/nsp8156I156IatCatT11AY.540.000095
ORF1ab/nsp8156I156LAtcCtc11AY.60.000041
ORF1ab/nsp8156I156TaTcaCc11AY.610.000105
ORF1ab/nsp8156I156VAtcGtc11AY.610.000105
ORF1ab/nsp8156I156del1Atc-tc11AY.650.000533
ORF1ab/nsp8156I156delATC---11AY.670.000464
ORF1ab/nsp8156I156IatCatA11AY.670.000464
ORF1ab/nsp8156I156LAtcCtc11AY.670.000464
ORF1ab/nsp8156I156TaTcaCc11AY.680.000274
ORF1ab/nsp8156I156IatCatT11AY.720.001361
ORF1ab/nsp8156I156IatCatA11AY.75.10.00018
ORF1ab/nsp8156I156IatCatT11AY.770.001127
ORF1ab/nsp8156I156FAtcTtc11AY.80.000606
ORF1ab/nsp8156I156VAtcGtc11AY.850.000427
ORF1ab/nsp8156I156IatCatT11AY.9.10.000084
ORF1ab/nsp8156I156del1atCat-11AY.9.20.000037
ORF1ab/nsp8156I156IatCatT11AY.9.20.000037
ORF1ab/nsp8156I156IatCatT11AY.9.2.10.001976
ORF1ab/nsp8156I156VAtcGtc11AY.910.00073
ORF1ab/nsp8156I156IatCatT11AY.920.000287
ORF1ab/nsp8156I156IatCatT11AY.930.000273
ORF1ab/nsp8156I156IatCatT11AY.940.000443
ORF1ab/nsp8156I156IatCatT11AY.980.000079
ORF1ab/nsp8156I156LAtcCtc11AY.980.000079
ORF1ab/nsp8156I156VAtcGtc11AY.98.10.000048
ORF1ab/nsp8156I156delATC---11B.10.000009
ORF1ab/nsp8156I156NaTcaAc11B.1.10.000018
ORF1ab/nsp8156I156TaTcaCc11B.1.1.10.000327
ORF1ab/nsp8156I156VAtcGtc11B.1.1.2070.001182
ORF1ab/nsp8156I156VAtcGtc11B.1.1.2140.000055
ORF1ab/nsp8156I156IatCatT11B.1.1.2160.00089
ORF1ab/nsp8156I156VAtcGtc11B.1.1.2630.001558
ORF1ab/nsp8156I156IatCatT11B.1.1.2690.001353
ORF1ab/nsp8156I156IatCatT11B.1.1.2770.000759
ORF1ab/nsp8156I156delATC---11B.1.1.280.000311
ORF1ab/nsp8156I156TaTcaCc11B.1.1.3120.001912
ORF1ab/nsp8156I156VAtcGtc11B.1.1.3160.000925
ORF1ab/nsp8156I156TaTcaCc11B.1.1.3590.027778
ORF1ab/nsp8156I156VAtcGtc11B.1.1.370.000193
ORF1ab/nsp8156I156VAtcGtc11B.1.1.390.00051
ORF1ab/nsp8156I156delATC---11B.1.1.4480.002033
ORF1ab/nsp8156I156IatCatT11B.1.1.550.012987
ORF1ab/nsp8156I156NaTcaAc11B.1.1.70.000001
ORF1ab/nsp8156I156SaTcaGc11B.1.1.70.000001
ORF1ab/nsp8156I156MatCatG11B.1.1.70.000001
ORF1ab/nsp8156I156del1Atc-tc11B.1.1.70.000001
ORF1ab/nsp8156I156IatCatT11B.1.1130.015625
ORF1ab/nsp8156I156IatCatT11B.1.1390.000733
ORF1ab/nsp8156I156IatCatT11B.1.1420.002899
ORF1ab/nsp8156I156TaTcaCc11B.1.1600.000031
ORF1ab/nsp8156I156VAtcGtc11B.1.160.70.002079
ORF1ab/nsp8156I156delATC---11B.1.1770.000013
ORF1ab/nsp8156I156IatCatT11B.1.177.190.001431
ORF1ab/nsp8156I156VAtcGtc11B.1.177.350.000691
ORF1ab/nsp8156I156VAtcGtc11B.1.177.440.000519
ORF1ab/nsp8156I156IatCatT11B.1.177.440.000519
ORF1ab/nsp8156I156TaTcaCc11B.1.177.510.004566
ORF1ab/nsp8156I156VAtcGtc11B.1.177.650.000665
ORF1ab/nsp8156I156IatCatA11B.1.177.70.000165
ORF1ab/nsp8156I156IatCatT11B.1.177.730.000566
ORF1ab/nsp8156I156VAtcGtc11B.1.177.730.000566
ORF1ab/nsp8156I156IatCatT11B.1.177.770.000726
ORF1ab/nsp8156I156VAtcGtc11B.1.177.770.000726
ORF1ab/nsp8156I156IatCatT11B.1.177.80.000752
ORF1ab/nsp8156I156IatCatT11B.1.2220.001692
ORF1ab/nsp8156I156VAtcGtc11B.1.2360.002053
ORF1ab/nsp8156I156LAtcCtc11B.1.2580.000067
ORF1ab/nsp8156I156MatCatG11B.1.2580.000067
ORF1ab/nsp8156I156IatCatT11B.1.258.20.004505
ORF1ab/nsp8156I156VAtcGtc11B.1.258.240.010753
ORF1ab/nsp8156I156VAtcGtc11B.1.3080.034483
ORF1ab/nsp8156I156IatCatT11B.1.3110.000275
ORF1ab/nsp8156I156IatCatT11B.1.3240.001605
ORF1ab/nsp8156I156VAtcGtc11B.1.3410.022727
ORF1ab/nsp8156I156VAtcGtc11B.1.3510.00003
ORF1ab/nsp8156I156TaTcaCc11B.1.3510.00003
ORF1ab/nsp8156I156TaTcaCc11B.1.360.000146
ORF1ab/nsp8156I156VAtcGtc11B.1.36.160.001425
ORF1ab/nsp8156I156TaTcaCc11B.1.36.160.001425
ORF1ab/nsp8156I156IatCatT11B.1.36.310.001751
ORF1ab/nsp8156I156IatCatT11B.1.36.380.001642
ORF1ab/nsp8156I156TaTcaCc11B.1.36.380.001642
ORF1ab/nsp8156I156IatCatT11B.1.3780.006849
ORF1ab/nsp8156I156VAtcGtc11B.1.3910.001127
ORF1ab/nsp8156I156IatCatT11B.1.3950.007042
ORF1ab/nsp8156I156delATC---11B.1.4090.000781
ORF1ab/nsp8156I156IatCatT11B.1.4110.003704
ORF1ab/nsp8156I156MatCatG11B.1.4290.000024
ORF1ab/nsp8156I156VAtcGtc11B.1.4290.000024
ORF1ab/nsp8156I156IatCatT11B.1.466.20.000391
ORF1ab/nsp8156I156TaTcaCc11B.1.4680.005714
ORF1ab/nsp8156I156VAtcGtc11B.1.5260.000024
ORF1ab/nsp8156I156TaTcaCc11B.1.5640.000426
ORF1ab/nsp8156I156VAtcGtc11B.1.5650.00081
ORF1ab/nsp8156I156IatCatT11B.1.5760.000907
ORF1ab/nsp8156I156VAtcGtc11B.1.5880.00091
ORF1ab/nsp8156I156IatCatT11B.1.5950.000261
ORF1ab/nsp8156I156TaTcaCc11B.1.5960.000087
ORF1ab/nsp8156I156IatCatT11B.1.617.10.000129
ORF1ab/nsp8156I156TaTcaCc11B.1.6210.000089
ORF1ab/nsp8156I156VAtcGtc11B.1.6210.000089
ORF1ab/nsp8156I156IatCatT11B.1.6300.005236
ORF1ab/nsp8156I156delATC---11B.340.013699
ORF1ab/nsp8156I156NaTcaAc11B.550.00295
ORF1ab/nsp8156I156VAtcGtc11B.550.00295
ORF1ab/nsp8156I156VAtcGtc11B.60.00091
ORF1ab/nsp8156I156IatCatA11B.60.00091
ORF1ab/nsp8156I156IatCatT11C.370.000116
ORF1ab/nsp8156I156IatCatT11D.20.000075
ORF1ab/nsp8156I156TaTcaCc11D.20.000075
ORF1ab/nsp8156I156delATC---11N.40.004255
ORF1ab/nsp8156I156IatCatT11N.50.001767
ORF1ab/nsp8156I156VAtcGtc11P.10.000016
ORF1ab/nsp8156I156TaTcaCc11P.1.100.000269
ORF1ab/nsp8156I156IatCatT11P.1.120.000484
ORF1ab/nsp8156I156IatCatT11P.1.140.000048
ORF1ab/nsp8156I156IatCatT11P.1.150.000232
ORF1ab/nsp8156I156IatCatT11P.1.70.000319
ORF1ab/nsp8156I156VAtcGtc11P.20.000187
ORF1ab/nsp8156I156LAtcCtc11Q.80.000165
ORF1ab/nsp8156I156VAtcGtc11R.10.00009
ORF1ab/nsp8156I156TaTcaCc11W.30.005263

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.