CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 152

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8152A152AA4094AsyngcAgcG6714980.74217612545-12547
ORF1ab/nsp8152A152AA4094AsyngcAgcT6711180.17585712545-12547
ORF1ab/nsp8152A152AA4094AsyngcAgcC671550.081967212545-12547
ORF1ab/nsp8152A152VA4094VnonsyngCagTa343343112545-12547
ORF1ab/nsp8152A152TA4094TnonsynGcaAca194194112545-12547
ORF1ab/nsp8152A152SA4094SnonsynGcaTca111111112545-12547
ORF1ab/nsp8152A152del1A4094del1delGca-ca7979112545-12547
ORF1ab/nsp8152A152delA4094deldelGCA---2828112545-12547
ORF1ab/nsp8152A152EA4094EnonsyngCagAa99112545-12547
ORF1ab/nsp8152A152del2A4094del2delGCa--a320.66666712545-12547
ORF1ab/nsp8152A152del2A4094del2delgCAg--310.33333312545-12547
ORF1ab/nsp8152A152KA4094KnonsynGCaAAa22112545-12547
ORF1ab/nsp8152A152GA4094GnonsyngCagGa11112545-12547

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8152A152AgcAgcG498671All0.000095
ORF1ab/nsp8152A152AgcAgcT118671All0.000023
ORF1ab/nsp8152A152AgcAgcC55671All0.000011
ORF1ab/nsp8152A152VgCagTa343343All0.000066
ORF1ab/nsp8152A152AgcAgcG209209B.1.1770.002752
ORF1ab/nsp8152A152TGcaAca194194All0.000037
ORF1ab/nsp8152A152SGcaTca111111All0.000021
ORF1ab/nsp8152A152TGcaAca8585B.1.20.000748
ORF1ab/nsp8152A152AgcAgcG4182B.1.1.70.000037
ORF1ab/nsp8152A152AgcAgcC2282B.1.1.70.00002
ORF1ab/nsp8152A152AgcAgcT1982B.1.1.70.000017
ORF1ab/nsp8152A152del1Gca-ca7979All0.000015
ORF1ab/nsp8152A152AgcAgcG7070AY.4.20.001518
ORF1ab/nsp8152A152del1Gca-ca6666B.1.1.70.000059
ORF1ab/nsp8152A152AgcAgcG5858B.1.36.200.983051
ORF1ab/nsp8152A152AgcAgcT5757B.1.1.3260.100352
ORF1ab/nsp8152A152VgCagTa5151B.1.1.70.000046
ORF1ab/nsp8152A152VgCagTa5050B.1.360.007295
ORF1ab/nsp8152A152VgCagTa3232AY.40.00005
ORF1ab/nsp8152A152SGcaTca2929P.1.140.001386
ORF1ab/nsp8152A152delGCA---2828All0.000005
ORF1ab/nsp8152A152AgcAgcC2525B.1.258.170.002599
ORF1ab/nsp8152A152VgCagTa2323B.10.000211
ORF1ab/nsp8152A152AgcAgcG2323P.10.000362
ORF1ab/nsp8152A152SGcaTca2222B.1.1.70.00002
ORF1ab/nsp8152A152AgcAgcG1020AY.1030.000062
ORF1ab/nsp8152A152AgcAgcT1020AY.1030.000062
ORF1ab/nsp8152A152VgCagTa2020AY.30.000199
ORF1ab/nsp8152A152TGcaAca2020B.1.1.70.000018
ORF1ab/nsp8152A152VgCagTa1818B.1.617.20.000068
ORF1ab/nsp8152A152VgCagTa1616B.1.1.3690.00714
ORF1ab/nsp8152A152TGcaAca1414AY.40.000022
ORF1ab/nsp8152A152VgCagTa1212AY.200.000466
ORF1ab/nsp8152A152AgcAgcG1011AY.30.000099
ORF1ab/nsp8152A152AgcAgcC111AY.30.00001
ORF1ab/nsp8152A152AgcAgcG611AY.440.000037
ORF1ab/nsp8152A152AgcAgcT511AY.440.00003
ORF1ab/nsp8152A152AgcAgcT1111P.1.160.004115
ORF1ab/nsp8152A152TGcaAca1010B.10.000092
ORF1ab/nsp8152A152EgCagAa99All0.000002
ORF1ab/nsp8152A152SGcaTca99AY.1030.000056
ORF1ab/nsp8152A152AgcAgcG69AY.40.000009
ORF1ab/nsp8152A152AgcAgcC29AY.40.000003
ORF1ab/nsp8152A152AgcAgcT19AY.40.000002
ORF1ab/nsp8152A152TGcaAca99AY.660.009626
ORF1ab/nsp8152A152VgCagTa99AY.740.001041
ORF1ab/nsp8152A152VgCagTa99B.1.20.000079
ORF1ab/nsp8152A152VgCagTa88AY.430.000035
ORF1ab/nsp8152A152VgCagTa88AY.440.000049
ORF1ab/nsp8152A152AgcAgcG88AY.640.004762
ORF1ab/nsp8152A152TGcaAca88AY.750.000448
ORF1ab/nsp8152A152delGCA---88B.1.1.70.000007
ORF1ab/nsp8152A152AgcAgcG78B.1.617.20.000026
ORF1ab/nsp8152A152AgcAgcT18B.1.617.20.000004
ORF1ab/nsp8152A152VgCagTa77AY.1000.000322
ORF1ab/nsp8152A152SGcaTca77AY.1180.000439
ORF1ab/nsp8152A152VgCagTa77B.1.10.000127
ORF1ab/nsp8152A152SGcaTca77B.1.177.190.010014
ORF1ab/nsp8152A152VgCagTa77B.1.4290.000165
ORF1ab/nsp8152A152AgcAgcT77B.1.5370.14
ORF1ab/nsp8152A152SGcaTca66B.1.617.20.000023
ORF1ab/nsp8152A152AgcAgcG55AY.1020.000133
ORF1ab/nsp8152A152AgcAgcG35AY.250.000018
ORF1ab/nsp8152A152AgcAgcC25AY.250.000012
ORF1ab/nsp8152A152TGcaAca55AY.4.20.000108
ORF1ab/nsp8152A152AgcAgcG55AY.430.000022
ORF1ab/nsp8152A152SGcaTca55B.10.000046
ORF1ab/nsp8152A152AgcAgcG45B.10.000037
ORF1ab/nsp8152A152AgcAgcT15B.10.000009
ORF1ab/nsp8152A152TGcaAca55B.1.1.1530.005476
ORF1ab/nsp8152A152VgCagTa55B.1.1770.000066
ORF1ab/nsp8152A152TGcaAca55B.1.5260.000118
ORF1ab/nsp8152A152VgCagTa55B.1.5260.000118
ORF1ab/nsp8152A152EgCagAa440.222222
ORF1ab/nsp8152A152TGcaAca44AY.250.000024
ORF1ab/nsp8152A152VgCagTa44AY.250.000024
ORF1ab/nsp8152A152VgCagTa44AY.98.10.000194
ORF1ab/nsp8152A152TGcaAca44B.1.617.20.000015
ORF1ab/nsp8152A152AgcAgcG44P.1.70.001277
ORF1ab/nsp8152A152del2GCa--a23All0
ORF1ab/nsp8152A152del2gCAg--13All0
ORF1ab/nsp8152A152VgCagTa33AY.1030.000019
ORF1ab/nsp8152A152AgcAgcG33AY.1090.002219
ORF1ab/nsp8152A152TGcaAca33AY.390.000074
ORF1ab/nsp8152A152delGCA---33AY.430.000013
ORF1ab/nsp8152A152AgcAgcG33AY.850.001282
ORF1ab/nsp8152A152del1Gca-ca33B.1.177.820.001432
ORF1ab/nsp8152A152SGcaTca33B.1.20.000026
ORF1ab/nsp8152A152AgcAgcG33B.1.20.000026
ORF1ab/nsp8152A152del1Gca-ca33B.1.3510.000089
ORF1ab/nsp8152A152KGCaAAa220.111111
ORF1ab/nsp8152A152KGCaAAa22All0
ORF1ab/nsp8152A152VgCagTa22AY.10.000791
ORF1ab/nsp8152A152SGcaTca22AY.1020.000053
ORF1ab/nsp8152A152SGcaTca22AY.1080.002205
ORF1ab/nsp8152A152VgCagTa22AY.1170.000169
ORF1ab/nsp8152A152AgcAgcC12AY.1180.000063
ORF1ab/nsp8152A152AgcAgcG12AY.1180.000063
ORF1ab/nsp8152A152VgCagTa22AY.140.000176
ORF1ab/nsp8152A152delGCA---22AY.250.000012
ORF1ab/nsp8152A152SGcaTca22AY.260.000057
ORF1ab/nsp8152A152TGcaAca22AY.440.000012
ORF1ab/nsp8152A152TGcaAca22AY.50.000041
ORF1ab/nsp8152A152del1Gca-ca22AY.520.001629
ORF1ab/nsp8152A152delGCA---22AY.750.000112
ORF1ab/nsp8152A152AgcAgcG22AY.750.000112
ORF1ab/nsp8152A152TGcaAca22AY.850.000854
ORF1ab/nsp8152A152AgcAgcG22AY.90.000135
ORF1ab/nsp8152A152EgCagAa22B.10.000018
ORF1ab/nsp8152A152VgCagTa22B.1.1.5190.000079
ORF1ab/nsp8152A152SGcaTca22B.1.1.700.000682
ORF1ab/nsp8152A152del1Gca-ca22B.1.1600.000062
ORF1ab/nsp8152A152VgCagTa22B.1.36.100.009569
ORF1ab/nsp8152A152VgCagTa22B.1.36.80.002
ORF1ab/nsp8152A152VgCagTa22B.1.4270.000101
ORF1ab/nsp8152A152AgcAgcT22D.20.00015
ORF1ab/nsp8152A152AgcAgcG11A.2.50.000499
ORF1ab/nsp8152A152VgCagTa11A.280.002646
ORF1ab/nsp8152A152VgCagTa11AD.20.000219
ORF1ab/nsp8152A152GgCagGa11All0
ORF1ab/nsp8152A152AgcAgcG11AY.1040.001984
ORF1ab/nsp8152A152VgCagTa11AY.1160.000287
ORF1ab/nsp8152A152VgCagTa11AY.1180.000063
ORF1ab/nsp8152A152AgcAgcC11AY.1210.000135
ORF1ab/nsp8152A152VgCagTa11AY.160.00038
ORF1ab/nsp8152A152SGcaTca11AY.200.000039
ORF1ab/nsp8152A152VgCagTa11AY.230.00007
ORF1ab/nsp8152A152TGcaAca11AY.270.000065
ORF1ab/nsp8152A152VgCagTa11AY.290.000016
ORF1ab/nsp8152A152TGcaAca11AY.30.00001
ORF1ab/nsp8152A152TGcaAca11AY.300.000396
ORF1ab/nsp8152A152VgCagTa11AY.320.000532
ORF1ab/nsp8152A152VgCagTa11AY.330.000067
ORF1ab/nsp8152A152AgcAgcT11AY.380.000499
ORF1ab/nsp8152A152AgcAgcG11AY.390.000025
ORF1ab/nsp8152A152SGcaTca11AY.40.000002
ORF1ab/nsp8152A152VgCagTa11AY.4.20.000022
ORF1ab/nsp8152A152delGCA---11AY.4.50.000107
ORF1ab/nsp8152A152SGcaTca11AY.420.00004
ORF1ab/nsp8152A152TGcaAca11AY.420.00004
ORF1ab/nsp8152A152TGcaAca11AY.430.000004
ORF1ab/nsp8152A152EgCagAa11AY.440.000006
ORF1ab/nsp8152A152delGCA---11AY.46.20.000635
ORF1ab/nsp8152A152VgCagTa11AY.46.40.000165
ORF1ab/nsp8152A152VgCagTa11AY.470.000031
ORF1ab/nsp8152A152VgCagTa11AY.50.000021
ORF1ab/nsp8152A152AgcAgcG11AY.5.40.000277
ORF1ab/nsp8152A152TGcaAca11AY.540.000095
ORF1ab/nsp8152A152VgCagTa11AY.590.00053
ORF1ab/nsp8152A152delGCA---11AY.650.000533
ORF1ab/nsp8152A152VgCagTa11AY.650.000533
ORF1ab/nsp8152A152SGcaTca11AY.7.20.000559
ORF1ab/nsp8152A152VgCagTa11AY.710.000475
ORF1ab/nsp8152A152VgCagTa11AY.750.000056
ORF1ab/nsp8152A152del2GCa--a11AY.780.001541
ORF1ab/nsp8152A152AgcAgcG11AY.840.000437
ORF1ab/nsp8152A152TGcaAca11AY.870.000833
ORF1ab/nsp8152A152VgCagTa11AY.940.000443
ORF1ab/nsp8152A152AgcAgcG11AY.98.10.000048
ORF1ab/nsp8152A152SGcaTca11B0.000128
ORF1ab/nsp8152A152GgCagGa11B.10.000009
ORF1ab/nsp8152A152delGCA---11B.10.000009
ORF1ab/nsp8152A152AgcAgcG11B.1.10.000018
ORF1ab/nsp8152A152SGcaTca11B.1.10.000018
ORF1ab/nsp8152A152delGCA---11B.1.10.000018
ORF1ab/nsp8152A152VgCagTa11B.1.1.1530.001095
ORF1ab/nsp8152A152SGcaTca11B.1.1.2140.000055
ORF1ab/nsp8152A152AgcAgcT11B.1.1.2220.000204
ORF1ab/nsp8152A152delGCA---11B.1.1.280.000311
ORF1ab/nsp8152A152AgcAgcT11B.1.1.280.000311
ORF1ab/nsp8152A152VgCagTa11B.1.1.3170.000412
ORF1ab/nsp8152A152SGcaTca11B.1.1.3240.052632
ORF1ab/nsp8152A152TGcaAca11B.1.1.330.000421
ORF1ab/nsp8152A152delGCA---11B.1.1.4090.002833
ORF1ab/nsp8152A152delGCA---11B.1.1.4480.002033
ORF1ab/nsp8152A152TGcaAca11B.1.1.5190.00004
ORF1ab/nsp8152A152VgCagTa11B.1.1.700.000341
ORF1ab/nsp8152A152SGcaTca11B.1.1600.000031
ORF1ab/nsp8152A152AgcAgcG11B.1.1600.000031
ORF1ab/nsp8152A152SGcaTca11B.1.1770.000013
ORF1ab/nsp8152A152delGCA---11B.1.1770.000013
ORF1ab/nsp8152A152AgcAgcG11B.1.177.320.00135
ORF1ab/nsp8152A152del1Gca-ca11B.1.177.60.000977
ORF1ab/nsp8152A152VgCagTa11B.1.177.690.001484
ORF1ab/nsp8152A152AgcAgcG11B.1.177.730.000566
ORF1ab/nsp8152A152AgcAgcG11B.1.177.810.000189
ORF1ab/nsp8152A152AgcAgcG11B.1.177.830.001481
ORF1ab/nsp8152A152TGcaAca11B.1.2210.000071
ORF1ab/nsp8152A152SGcaTca11B.1.2340.000132
ORF1ab/nsp8152A152TGcaAca11B.1.2340.000132
ORF1ab/nsp8152A152VgCagTa11B.1.2340.000132
ORF1ab/nsp8152A152AgcAgcG11B.1.2580.000067
ORF1ab/nsp8152A152AgcAgcG11B.1.258.110.000396
ORF1ab/nsp8152A152AgcAgcG11B.1.3110.000275
ORF1ab/nsp8152A152del1Gca-ca11B.1.36.10.00114
ORF1ab/nsp8152A152VgCagTa11B.1.36.170.000494
ORF1ab/nsp8152A152VgCagTa11B.1.36.220.001208
ORF1ab/nsp8152A152SGcaTca11B.1.3690.000285
ORF1ab/nsp8152A152TGcaAca11B.1.3820.008929
ORF1ab/nsp8152A152TGcaAca11B.1.4290.000024
ORF1ab/nsp8152A152SGcaTca11B.1.4290.000024
ORF1ab/nsp8152A152SGcaTca11B.1.4320.011236
ORF1ab/nsp8152A152TGcaAca11B.1.438.10.000107
ORF1ab/nsp8152A152VgCagTa11B.1.4560.003268
ORF1ab/nsp8152A152AgcAgcT11B.1.5820.000491
ORF1ab/nsp8152A152TGcaAca11B.1.5960.000087
ORF1ab/nsp8152A152AgcAgcC11B.1.6090.000479
ORF1ab/nsp8152A152EgCagAa11B.1.6120.002653
ORF1ab/nsp8152A152del2GCa--a11B.1.617.20.000004
ORF1ab/nsp8152A152EgCagAa11B.1.617.20.000004
ORF1ab/nsp8152A152delGCA---11B.1.617.20.000004
ORF1ab/nsp8152A152VgCagTa11B.1.621.10.000506
ORF1ab/nsp8152A152TGcaAca11B.1.6280.000352
ORF1ab/nsp8152A152VgCagTa11B.310.003731
ORF1ab/nsp8152A152del2gCAg--11B.340.013699
ORF1ab/nsp8152A152delGCA---11C.360.000911
ORF1ab/nsp8152A152delGCA---11N.40.004255
ORF1ab/nsp8152A152VgCagTa11P.1.100.000269
ORF1ab/nsp8152A152VgCagTa11P.20.000187
ORF1ab/nsp8152A152VgCagTa11Q.10.000126
ORF1ab/nsp8152A152SGcaTca11Q.80.000165
ORF1ab/nsp8152A152delGCA---11Q.80.000165
ORF1ab/nsp8152A152del1Gca-ca11R.10.00009