CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 145

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8145T145IT4087InonsynaCaaTa3666336663112524-12526
ORF1ab/nsp8145T145TT4087TsynacAacT9977570.75927812524-12526
ORF1ab/nsp8145T145TT4087TsynacAacG9972090.20962912524-12526
ORF1ab/nsp8145T145TT4087TsynacAacC997310.031093312524-12526
ORF1ab/nsp8145T145AT4087AnonsynAcaGca1541530.99350612524-12526
ORF1ab/nsp8145T145AT4087AnonsynAcAGcT15410.0064935112524-12526
ORF1ab/nsp8145T145delT4087deldelACA---4848112524-12526
ORF1ab/nsp8145T145KT4087KnonsynaCaaAa1818112524-12526
ORF1ab/nsp8145T145VT4087VnonsynACaGTa12100.83333312524-12526
ORF1ab/nsp8145T145VT4087VnonsynACAGTT1220.16666712524-12526
ORF1ab/nsp8145T145RT4087RnonsynaCaaGa55112524-12526
ORF1ab/nsp8145T145PT4087PnonsynAcaCca33112524-12526
ORF1ab/nsp8145T145LT4087LnonsynACaTTa320.66666712524-12526
ORF1ab/nsp8145T145LT4087LnonsynACACTT310.33333312524-12526
ORF1ab/nsp8145T145XT4087XnonsynACaTAa22112524-12526
ORF1ab/nsp8145T145GT4087GnonsynACAGGT210.512524-12526
ORF1ab/nsp8145T145ST4087SnonsynAcaTca210.512524-12526
ORF1ab/nsp8145T145ST4087SnonsynaCAaGT210.512524-12526
ORF1ab/nsp8145T145GT4087GnonsynACaGGa210.512524-12526
ORF1ab/nsp8145T145MT4087MnonsynaCAaTG11112524-12526
ORF1ab/nsp8145T145del2T4087del2delACa--a11112524-12526
ORF1ab/nsp8145T145del1T4087del1delacAac-11112524-12526

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8145T145IaCaaTa3666336663All0.007012
ORF1ab/nsp8145T145IaCaaTa1098710987B.1.1.70.009836
ORF1ab/nsp8145T145IaCaaTa1071110711AY.99.20.987098
ORF1ab/nsp8145T145IaCaaTa34433443B.1.3110.94536
ORF1ab/nsp8145T145IaCaaTa26422642AY.40.004112
ORF1ab/nsp8145T145IaCaaTa19461946B.1.2790.999486
ORF1ab/nsp8145T145TacAacT757997All0.000145
ORF1ab/nsp8145T145TacAacG209997All0.00004
ORF1ab/nsp8145T145TacAacC31997All0.000006
ORF1ab/nsp8145T145IaCaaTa885885B.1.20.007793
ORF1ab/nsp8145T145IaCaaTa587587AY.50.012121
ORF1ab/nsp8145T145IaCaaTa554554Q.80.091359
ORF1ab/nsp8145T145TacAacT449452AY.430.001989
ORF1ab/nsp8145T145TacAacG3452AY.430.000013
ORF1ab/nsp8145T145IaCaaTa449449AY.430.001989
ORF1ab/nsp8145T145IaCaaTa362362B.1.617.20.001363
ORF1ab/nsp8145T145IaCaaTa308308AY.1030.001912
ORF1ab/nsp8145T145IaCaaTa255255B.1.1.2220.05202
ORF1ab/nsp8145T145TacAacT237252AY.40.000369
ORF1ab/nsp8145T145TacAacG14252AY.40.000022
ORF1ab/nsp8145T145TacAacC1252AY.40.000002
ORF1ab/nsp8145T145IaCaaTa236236B.10.002162
ORF1ab/nsp8145T145IaCaaTa227227B.1.2350.571788
ORF1ab/nsp8145T145IaCaaTa214214AY.440.001303
ORF1ab/nsp8145T145AAcaGca153154All0.000029
ORF1ab/nsp8145T145AAcAGcT1154All0
ORF1ab/nsp8145T145IaCaaTa125125AY.1060.041862
ORF1ab/nsp8145T145IaCaaTa106106AY.30.001054
ORF1ab/nsp8145T145IaCaaTa9999P.10.00156
ORF1ab/nsp8145T145IaCaaTa9292B.1.10.001669
ORF1ab/nsp8145T145IaCaaTa8181AY.250.000487
ORF1ab/nsp8145T145IaCaaTa7676B.1.1.4160.068778
ORF1ab/nsp8145T145IaCaaTa7575AY.260.002123
ORF1ab/nsp8145T145IaCaaTa7070B.1.1600.002183
ORF1ab/nsp8145T145TacAacG6666B.1.177.830.097778
ORF1ab/nsp8145T145IaCaaTa6464B.1.1770.000843
ORF1ab/nsp8145T145IaCaaTa6060B.1.1.5190.002383
ORF1ab/nsp8145T145IaCaaTa5656B.1.4601
ORF1ab/nsp8145T145IaCaaTa5151B.1.2340.006729
ORF1ab/nsp8145T145IaCaaTa4949AY.1000.002254
ORF1ab/nsp8145T145delACA---4848All0.000009
ORF1ab/nsp8145T145IaCaaTa4848AY.1180.003007
ORF1ab/nsp8145T145IaCaaTa4848B.1.5960.004183
ORF1ab/nsp8145T145TacAacT2947B.1.1.70.000026
ORF1ab/nsp8145T145TacAacG1247B.1.1.70.000011
ORF1ab/nsp8145T145TacAacC647B.1.1.70.000005
ORF1ab/nsp8145T145IaCaaTa4646Q.10.005811
ORF1ab/nsp8145T145IaCaaTa4242AY.1020.001114
ORF1ab/nsp8145T145IaCaaTa4040AY.290.000631
ORF1ab/nsp8145T145IaCaaTa4040B.1.2580.002662
ORF1ab/nsp8145T145TacAacG3738B.1.1770.000487
ORF1ab/nsp8145T145TacAacT138B.1.1770.000013
ORF1ab/nsp8145T145IaCaaTa3636B.1.3510.00107
ORF1ab/nsp8145T145IaCaaTa3636B.1.4290.000847
ORF1ab/nsp8145T145IaCaaTa3333AY.390.000815
ORF1ab/nsp8145T145IaCaaTa3131P.1.150.007203
ORF1ab/nsp8145T145IaCaaTa3030AY.1190.001059
ORF1ab/nsp8145T145IaCaaTa2929B.1.2400.006251
ORF1ab/nsp8145T145IaCaaTa2828AY.200.001088
ORF1ab/nsp8145T145IaCaaTa2727B.1.5260.000635
ORF1ab/nsp8145T145IaCaaTa2626B.1.2430.001809
ORF1ab/nsp8145T145IaCaaTa2525B.1.4270.001262
ORF1ab/nsp8145T145IaCaaTa2424B.1.177.330.039474
ORF1ab/nsp8145T145IaCaaTa2323B.1.1.1520.92
ORF1ab/nsp8145T145IaCaaTa2222B.1.5610.008734
ORF1ab/nsp8145T145IaCaaTa2121B.1.1.1780.875
ORF1ab/nsp8145T145IaCaaTa2121B.1.1.250.011939
ORF1ab/nsp8145T145IaCaaTa2121B.1.5170.008967
ORF1ab/nsp8145T145IaCaaTa2121B.1.5820.010304
ORF1ab/nsp8145T145AAcaGca2121B.1.617.20.000079
ORF1ab/nsp8145T145TacAacG1620AY.250.000096
ORF1ab/nsp8145T145TacAacT420AY.250.000024
ORF1ab/nsp8145T145IaCaaTa2020AZ.10.017346
ORF1ab/nsp8145T145AAcaGca1919AY.40.00003
ORF1ab/nsp8145T145IaCaaTa1919B.1.2210.00135
ORF1ab/nsp8145T145IaCaaTa1919B.1.6370.001388
ORF1ab/nsp8145T145KaCaaAa1818All0.000003
ORF1ab/nsp8145T145TacAacC1818AY.1190.000636
ORF1ab/nsp8145T145IaCaaTa1818AY.360.002668
ORF1ab/nsp8145T145IaCaaTa1818B.1.1390.013196
ORF1ab/nsp8145T145IaCaaTa1818B.1.177.730.010193
ORF1ab/nsp8145T145IaCaaTa1818P.1.70.005747
ORF1ab/nsp8145T145IaCaaTa1717AY.330.001135
ORF1ab/nsp8145T145IaCaaTa1717AY.990.017838
ORF1ab/nsp8145T145TacAacG1717P.10.000268
ORF1ab/nsp8145T145IaCaaTa1616AY.740.00185
ORF1ab/nsp8145T145IaCaaTa1616B0.002045
ORF1ab/nsp8145T145IaCaaTa1616B.1.177.440.008303
ORF1ab/nsp8145T145IaCaaTa1515AY.1130.002136
ORF1ab/nsp8145T145IaCaaTa1515AY.530.004313
ORF1ab/nsp8145T145IaCaaTa1515B.1.617.10.001934
ORF1ab/nsp8145T145IaCaaTa1515B.400.005464
ORF1ab/nsp8145T145IaCaaTa1414AY.750.000784
ORF1ab/nsp8145T145IaCaaTa1414AY.90.000946
ORF1ab/nsp8145T145delACA---1414B.1.1.70.000013
ORF1ab/nsp8145T145IaCaaTa1414B.1.4510.114754
ORF1ab/nsp8145T145IaCaaTa1414B.1.5950.003653
ORF1ab/nsp8145T145IaCaaTa1414C.370.001625
ORF1ab/nsp8145T145IaCaaTa1414P.1.140.000669
ORF1ab/nsp8145T145IaCaaTa1313AY.470.000404
ORF1ab/nsp8145T145IaCaaTa1313AY.60.000535
ORF1ab/nsp8145T145IaCaaTa1313AY.980.001027
ORF1ab/nsp8145T145AAcaGca1313B.1.1.70.000012
ORF1ab/nsp8145T145IaCaaTa1313Q.30.001885
ORF1ab/nsp8145T145VACaGTa1012All0.000002
ORF1ab/nsp8145T145VACAGTT212All0
ORF1ab/nsp8145T145IaCaaTa1212AY.1210.001624
ORF1ab/nsp8145T145AAcaGca1212AY.5.30.004049
ORF1ab/nsp8145T145IaCaaTa1212B.1.1.100.013378
ORF1ab/nsp8145T145TacAacG711AY.30.00007
ORF1ab/nsp8145T145TacAacC311AY.30.00003
ORF1ab/nsp8145T145TacAacT111AY.30.00001
ORF1ab/nsp8145T145IaCaaTa1111AY.420.000443
ORF1ab/nsp8145T145IaCaaTa1111AY.5.30.003711
ORF1ab/nsp8145T145IaCaaTa1111AY.9.20.000404
ORF1ab/nsp8145T145IaCaaTa1111B.1.177.80.008277
ORF1ab/nsp8145T145IaCaaTa1111B.1.36.290.005691
ORF1ab/nsp8145T145TacAacT911B.1.617.20.000034
ORF1ab/nsp8145T145TacAacG211B.1.617.20.000008
ORF1ab/nsp8145T145IaCaaTa1111B.1.6210.000974
ORF1ab/nsp8145T145AAcaGca1010AY.1170.000845
ORF1ab/nsp8145T145IaCaaTa1010AY.3.10.000853
ORF1ab/nsp8145T145IaCaaTa1010AY.39.10.000396
ORF1ab/nsp8145T145IaCaaTa1010AY.46.60.000722
ORF1ab/nsp8145T145AAcaGca1010AY.750.00056
ORF1ab/nsp8145T145IaCaaTa1010B.1.1.2140.000555
ORF1ab/nsp8145T145IaCaaTa1010B.1.1.700.003411
ORF1ab/nsp8145T145IaCaaTa1010B.1.3610.012887
ORF1ab/nsp8145T145IaCaaTa1010B.1.4000.00429
ORF1ab/nsp8145T145AAcaGca99AY.290.000142
ORF1ab/nsp8145T145AAcaGca99AY.440.000055
ORF1ab/nsp8145T145IaCaaTa99AY.460.000937
ORF1ab/nsp8145T145IaCaaTa99AY.480.004186
ORF1ab/nsp8145T145IaCaaTa99AY.840.003937
ORF1ab/nsp8145T145IaCaaTa99AY.98.10.000436
ORF1ab/nsp8145T145VACaGTa99AY.99.20.000829
ORF1ab/nsp8145T145IaCaaTa99AZ.20.007389
ORF1ab/nsp8145T145AAcaGca99B.1.1.2220.001836
ORF1ab/nsp8145T145IaCaaTa99B.1.177.600.001966
ORF1ab/nsp8145T145IaCaaTa99B.1.360.001313
ORF1ab/nsp8145T145IaCaaTa99B.1.5250.001018
ORF1ab/nsp8145T145IaCaaTa99B.1.5880.008189
ORF1ab/nsp8145T145IaCaaTa88AY.1200.000297
ORF1ab/nsp8145T145delACA---88AY.40.000012
ORF1ab/nsp8145T145IaCaaTa88B.1.1.2940.010127
ORF1ab/nsp8145T145IaCaaTa88B.1.1.3180.002414
ORF1ab/nsp8145T145IaCaaTa88B.1.3460.010485
ORF1ab/nsp8145T145IaCaaTa88B.1.3690.002282
ORF1ab/nsp8145T145IaCaaTa88B.1.3960.005646
ORF1ab/nsp8145T145IaCaaTa77AY.1170.000592
ORF1ab/nsp8145T145IaCaaTa77AY.140.000616
ORF1ab/nsp8145T145IaCaaTa77AY.280.013233
ORF1ab/nsp8145T145IaCaaTa77AY.46.50.001389
ORF1ab/nsp8145T145IaCaaTa77B.1.1.330.002946
ORF1ab/nsp8145T145AAcaGca77B.1.20.000062
ORF1ab/nsp8145T145IaCaaTa66AY.230.000418
ORF1ab/nsp8145T145TacAacT66AY.260.00017
ORF1ab/nsp8145T145IaCaaTa66AY.29.10.001323
ORF1ab/nsp8145T145IaCaaTa66AY.340.000582
ORF1ab/nsp8145T145IaCaaTa66AY.500.004796
ORF1ab/nsp8145T145IaCaaTa66AY.790.007264
ORF1ab/nsp8145T145IaCaaTa66B.1.1.280.001867
ORF1ab/nsp8145T145IaCaaTa66B.1.1.3170.00247
ORF1ab/nsp8145T145KaCaaAa66B.1.1.70.000005
ORF1ab/nsp8145T145IaCaaTa66B.1.177.860.001101
ORF1ab/nsp8145T145IaCaaTa66D.20.00045
ORF1ab/nsp8145T145IaCaaTa66Q.40.002729
ORF1ab/nsp8145T145RaCaaGa55All0.000001
ORF1ab/nsp8145T145AAcaGca55AY.1030.000031
ORF1ab/nsp8145T145KaCaaAa55AY.40.000008
ORF1ab/nsp8145T145IaCaaTa55AY.4.20.000108
ORF1ab/nsp8145T145IaCaaTa55AY.540.000477
ORF1ab/nsp8145T145TacAacG35B.10.000027
ORF1ab/nsp8145T145TacAacT15B.10.000009
ORF1ab/nsp8145T145TacAacC15B.10.000009
ORF1ab/nsp8145T145IaCaaTa55B.1.1.10.001633
ORF1ab/nsp8145T145IaCaaTa55B.1.1.1760.002197
ORF1ab/nsp8145T145IaCaaTa55B.1.1.370.000964
ORF1ab/nsp8145T145IaCaaTa55B.1.177.810.000947
ORF1ab/nsp8145T145TacAacG55B.1.4290.000118
ORF1ab/nsp8145T145IaCaaTa44A0.001548
ORF1ab/nsp8145T145TacAacG44AY.1030.000025
ORF1ab/nsp8145T145IaCaaTa44AY.1160.001147
ORF1ab/nsp8145T145delACA---44AY.430.000018
ORF1ab/nsp8145T145IaCaaTa44AY.450.000487
ORF1ab/nsp8145T145IaCaaTa44AY.5.40.001107
ORF1ab/nsp8145T145IaCaaTa44AY.550.00367
ORF1ab/nsp8145T145IaCaaTa44AY.710.0019
ORF1ab/nsp8145T145IaCaaTa44AY.770.00451
ORF1ab/nsp8145T145IaCaaTa44AY.9.10.000335
ORF1ab/nsp8145T145TacAacT44AY.98.10.000194
ORF1ab/nsp8145T145AAcaGca44B.1.10.000073
ORF1ab/nsp8145T145IaCaaTa44B.1.1.270.022599
ORF1ab/nsp8145T145IaCaaTa44B.1.1.630.001543
ORF1ab/nsp8145T145IaCaaTa44B.1.177.210.000306
ORF1ab/nsp8145T145TacAacT44B.1.177.210.000306
ORF1ab/nsp8145T145IaCaaTa44B.1.5510.005161
ORF1ab/nsp8145T145IaCaaTa44B.1.5580.018265
ORF1ab/nsp8145T145IaCaaTa44P.1.120.001936
ORF1ab/nsp8145T145AAcaGca44Q.10.000505
ORF1ab/nsp8145T145IaCaaTa33A.20.001985
ORF1ab/nsp8145T145IaCaaTa33AD.20.000657
ORF1ab/nsp8145T145PAcaCca33All0.000001
ORF1ab/nsp8145T145LACaTTa23All0
ORF1ab/nsp8145T145LACACTT13All0
ORF1ab/nsp8145T145IaCaaTa33AY.1090.002219
ORF1ab/nsp8145T145IaCaaTa33AY.16.10.00141
ORF1ab/nsp8145T145IaCaaTa33AY.270.000194
ORF1ab/nsp8145T145IaCaaTa33AY.320.001597
ORF1ab/nsp8145T145IaCaaTa33AY.350.000699
ORF1ab/nsp8145T145AAcaGca33AY.410.000882
ORF1ab/nsp8145T145IaCaaTa33AY.46.40.000494
ORF1ab/nsp8145T145IaCaaTa33AY.610.000314
ORF1ab/nsp8145T145IaCaaTa33AY.690.00056
ORF1ab/nsp8145T145IaCaaTa33AY.700.000626
ORF1ab/nsp8145T145TacAacG33AY.9.20.00011
ORF1ab/nsp8145T145IaCaaTa33B.1.1.1600.071429
ORF1ab/nsp8145T145IaCaaTa33B.1.1.2840.000322
ORF1ab/nsp8145T145IaCaaTa33B.1.1.3740.007126
ORF1ab/nsp8145T145IaCaaTa33B.1.1.3890.018182
ORF1ab/nsp8145T145IaCaaTa33B.1.1.390.001529
ORF1ab/nsp8145T145IaCaaTa33B.1.1.5280.014423
ORF1ab/nsp8145T145IaCaaTa33B.1.1190.031579
ORF1ab/nsp8145T145IaCaaTa33B.1.177.70.000495
ORF1ab/nsp8145T145IaCaaTa33B.1.177.790.007026
ORF1ab/nsp8145T145IaCaaTa33B.1.258.170.000312
ORF1ab/nsp8145T145IaCaaTa33B.1.36.180.001261
ORF1ab/nsp8145T145IaCaaTa33B.1.36.220.003623
ORF1ab/nsp8145T145IaCaaTa33B.1.36.380.004926
ORF1ab/nsp8145T145IaCaaTa33B.1.36.80.003
ORF1ab/nsp8145T145IaCaaTa33B.340.041096
ORF1ab/nsp8145T145IaCaaTa33C.350.002322
ORF1ab/nsp8145T145IaCaaTa33P.1.160.001122
ORF1ab/nsp8145T145IaCaaTa33P.1.170.000485
ORF1ab/nsp8145T145IaCaaTa33P.1.90.014423
ORF1ab/nsp8145T145VACAGTT220.111111
ORF1ab/nsp8145T145XACaTAa220.111111
ORF1ab/nsp8145T145LACaTTa220.111111
ORF1ab/nsp8145T145TacAacG220.111111
ORF1ab/nsp8145T145IaCaaTa22A.23.10.001408
ORF1ab/nsp8145T145XACaTAa22All0
ORF1ab/nsp8145T145GACaGGa12All0
ORF1ab/nsp8145T145SaCAaGT12All0
ORF1ab/nsp8145T145SAcaTca12All0
ORF1ab/nsp8145T145GACAGGT12All0
ORF1ab/nsp8145T145IaCaaTa22AM.40.007143
ORF1ab/nsp8145T145IaCaaTa22AS.20.03125
ORF1ab/nsp8145T145IaCaaTa22AY.1010.000981
ORF1ab/nsp8145T145IaCaaTa22AY.1080.002205
ORF1ab/nsp8145T145IaCaaTa22AY.1110.000366
ORF1ab/nsp8145T145IaCaaTa22AY.120.000632
ORF1ab/nsp8145T145IaCaaTa22AY.160.000759
ORF1ab/nsp8145T145IaCaaTa22AY.20.000712
ORF1ab/nsp8145T145AAcaGca22AY.30.00002
ORF1ab/nsp8145T145TacAacT12AY.390.000025
ORF1ab/nsp8145T145TacAacG12AY.390.000025
ORF1ab/nsp8145T145IaCaaTa22AY.4.40.000818
ORF1ab/nsp8145T145IaCaaTa22AY.4.50.000215
ORF1ab/nsp8145T145delACA---22AY.4.50.000215
ORF1ab/nsp8145T145IaCaaTa22AY.46.30.001867
ORF1ab/nsp8145T145TacAacG22AY.470.000062
ORF1ab/nsp8145T145IaCaaTa22AY.7.10.000225
ORF1ab/nsp8145T145delACA---22AY.750.000112
ORF1ab/nsp8145T145IaCaaTa22AY.75.10.000361
ORF1ab/nsp8145T145IaCaaTa22AY.930.000546
ORF1ab/nsp8145T145IaCaaTa22AY.950.001522
ORF1ab/nsp8145T145IaCaaTa22AY.99.10.003106
ORF1ab/nsp8145T145KaCaaAa22B.10.000018
ORF1ab/nsp8145T145TacAacG12B.1.10.000018
ORF1ab/nsp8145T145TacAacT12B.1.10.000018
ORF1ab/nsp8145T145IaCaaTa22B.1.1.3690.000892
ORF1ab/nsp8145T145IaCaaTa22B.1.1.5070.017391
ORF1ab/nsp8145T145IaCaaTa22B.1.177.40.000422
ORF1ab/nsp8145T145AAcaGca12B.1.30.002618
ORF1ab/nsp8145T145GACAGGT12B.1.30.002618
ORF1ab/nsp8145T145GACaGGa12B.1.30.002618
ORF1ab/nsp8145T145AAcAGcT12B.1.30.002618
ORF1ab/nsp8145T145IaCaaTa22B.1.3440.016393
ORF1ab/nsp8145T145IaCaaTa22B.1.351.20.000605
ORF1ab/nsp8145T145IaCaaTa22B.1.351.30.001753
ORF1ab/nsp8145T145IaCaaTa22B.1.36.240.012346
ORF1ab/nsp8145T145IaCaaTa22B.1.36.260.005714
ORF1ab/nsp8145T145IaCaaTa22B.1.3750.001639
ORF1ab/nsp8145T145IaCaaTa22B.1.4700.002809
ORF1ab/nsp8145T145IaCaaTa22B.1.5090.001732
ORF1ab/nsp8145T145IaCaaTa22B.1.575.10.004878
ORF1ab/nsp8145T145IaCaaTa22B.1.619.10.001283
ORF1ab/nsp8145T145IaCaaTa22B.1.6230.001073
ORF1ab/nsp8145T145IaCaaTa22B.1.80.003945
ORF1ab/nsp8145T145AAcaGca22P.1.70.000639
ORF1ab/nsp8145T145IaCaaTa22P.20.000373
ORF1ab/nsp8145T145IaCaaTa22P.60.006289
ORF1ab/nsp8145T145IaCaaTa22R.10.00018
ORF1ab/nsp8145T145IaCaaTa22V.10.045455
ORF1ab/nsp8145T145IaCaaTa110.055556
ORF1ab/nsp8145T145delACA---11A0.000387
ORF1ab/nsp8145T145AAcaGca11A.10.000282
ORF1ab/nsp8145T145IaCaaTa11A.10.000282
ORF1ab/nsp8145T145KaCaaAa11A.190.009434
ORF1ab/nsp8145T145IaCaaTa11A.2.5.20.001572
ORF1ab/nsp8145T145IaCaaTa11A.290.005319
ORF1ab/nsp8145T145IaCaaTa11A.50.001923
ORF1ab/nsp8145T145IaCaaTa11AE.10.011364
ORF1ab/nsp8145T145del2ACa--a11All0
ORF1ab/nsp8145T145MaCAaTG11All0
ORF1ab/nsp8145T145del1acAac-11All0
ORF1ab/nsp8145T145IaCaaTa11AY.100.00053
ORF1ab/nsp8145T145AAcaGca11AY.1020.000027
ORF1ab/nsp8145T145PAcaCca11AY.1020.000027
ORF1ab/nsp8145T145TacAacT11AY.1020.000027
ORF1ab/nsp8145T145IaCaaTa11AY.1100.000113
ORF1ab/nsp8145T145IaCaaTa11AY.116.10.000311
ORF1ab/nsp8145T145KaCaaAa11AY.1170.000085
ORF1ab/nsp8145T145delACA---11AY.1190.000035
ORF1ab/nsp8145T145TacAacG11AY.1200.000037
ORF1ab/nsp8145T145IaCaaTa11AY.130.000161
ORF1ab/nsp8145T145IaCaaTa11AY.190.00114
ORF1ab/nsp8145T145IaCaaTa11AY.23.10.000417
ORF1ab/nsp8145T145IaCaaTa11AY.240.000431
ORF1ab/nsp8145T145delACA---11AY.250.000006
ORF1ab/nsp8145T145AAcaGca11AY.250.000006
ORF1ab/nsp8145T145TacAacG11AY.290.000016
ORF1ab/nsp8145T145RaCaaGa11AY.30.00001
ORF1ab/nsp8145T145KaCaaAa11AY.340.000097
ORF1ab/nsp8145T145IaCaaTa11AY.34.10.00051
ORF1ab/nsp8145T145AAcaGca11AY.360.000148
ORF1ab/nsp8145T145IaCaaTa11AY.380.000499
ORF1ab/nsp8145T145delACA---11AY.390.000025
ORF1ab/nsp8145T145TacAacT11AY.4.20.000022
ORF1ab/nsp8145T145IaCaaTa11AY.4.30.000842
ORF1ab/nsp8145T145TacAacG11AY.4.50.000107
ORF1ab/nsp8145T145IaCaaTa11AY.400.000964
ORF1ab/nsp8145T145IaCaaTa11AY.410.000294
ORF1ab/nsp8145T145TacAacG11AY.420.00004
ORF1ab/nsp8145T145TacAacT11AY.440.000006
ORF1ab/nsp8145T145delACA---11AY.46.20.000635
ORF1ab/nsp8145T145RaCaaGa11AY.470.000031
ORF1ab/nsp8145T145TacAacG11AY.50.000021
ORF1ab/nsp8145T145TacAacG11AY.5.30.000337
ORF1ab/nsp8145T145IaCaaTa11AY.520.000814
ORF1ab/nsp8145T145TacAacG11AY.60.000041
ORF1ab/nsp8145T145AAcaGca11AY.610.000105
ORF1ab/nsp8145T145TacAacC11AY.610.000105
ORF1ab/nsp8145T145AAcaGca11AY.620.000436
ORF1ab/nsp8145T145IaCaaTa11AY.640.000595
ORF1ab/nsp8145T145delACA---11AY.650.000533
ORF1ab/nsp8145T145IaCaaTa11AY.670.000464
ORF1ab/nsp8145T145IaCaaTa11AY.680.000274
ORF1ab/nsp8145T145TacAacT11AY.730.000665
ORF1ab/nsp8145T145TacAacT11AY.750.000056
ORF1ab/nsp8145T145AAcaGca11AY.75.10.00018
ORF1ab/nsp8145T145delACA---11AY.80.000606
ORF1ab/nsp8145T145delACA---11B.10.000009
ORF1ab/nsp8145T145PAcaCca11B.10.000009
ORF1ab/nsp8145T145AAcaGca11B.10.000009
ORF1ab/nsp8145T145RaCaaGa11B.1.10.000018
ORF1ab/nsp8145T145IaCaaTa11B.1.1.1370.0125
ORF1ab/nsp8145T145IaCaaTa11B.1.1.1640.005155
ORF1ab/nsp8145T145IaCaaTa11B.1.1.1890.001513
ORF1ab/nsp8145T145KaCaaAa11B.1.1.2100.005714
ORF1ab/nsp8145T145IaCaaTa11B.1.1.2190.005
ORF1ab/nsp8145T145IaCaaTa11B.1.1.2550.00303
ORF1ab/nsp8145T145IaCaaTa11B.1.1.2690.001353
ORF1ab/nsp8145T145delACA---11B.1.1.280.000311
ORF1ab/nsp8145T145IaCaaTa11B.1.1.2800.003086
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3030.002762
ORF1ab/nsp8145T145AAcaGca11B.1.1.3060.000438
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3060.000438
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3110.000358
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3220.008772
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3260.001761
ORF1ab/nsp8145T145SAcaTca11B.1.1.330.000421
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3580.034483
ORF1ab/nsp8145T145delACA---11B.1.1.370.000193
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp8145T145IaCaaTa11B.1.1.3870.058824
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4020.011111
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4090.002833
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4200.001006
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4340.000349
ORF1ab/nsp8145T145delACA---11B.1.1.4480.002033
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4500.034483
ORF1ab/nsp8145T145IaCaaTa11B.1.1.4640.001473
ORF1ab/nsp8145T145IaCaaTa11B.1.1.5000.02
ORF1ab/nsp8145T145AAcaGca11B.1.1.5190.00004
ORF1ab/nsp8145T145IaCaaTa11B.1.1.5230.001563
ORF1ab/nsp8145T145IaCaaTa11B.1.1.5260.003546
ORF1ab/nsp8145T145del2ACa--a11B.1.1.70.000001
ORF1ab/nsp8145T145VACaGTa11B.1.1.70.000001
ORF1ab/nsp8145T145IaCaaTa11B.1.1490.003425
ORF1ab/nsp8145T145IaCaaTa11B.1.160.160.000929
ORF1ab/nsp8145T145IaCaaTa11B.1.160.220.006757
ORF1ab/nsp8145T145IaCaaTa11B.1.160.280.002924
ORF1ab/nsp8145T145IaCaaTa11B.1.1670.007812
ORF1ab/nsp8145T145delACA---11B.1.1770.000013
ORF1ab/nsp8145T145IaCaaTa11B.1.177.120.000152
ORF1ab/nsp8145T145IaCaaTa11B.1.177.150.000631
ORF1ab/nsp8145T145IaCaaTa11B.1.177.160.000664
ORF1ab/nsp8145T145IaCaaTa11B.1.177.170.000821
ORF1ab/nsp8145T145IaCaaTa11B.1.177.20.004545
ORF1ab/nsp8145T145IaCaaTa11B.1.177.300.002513
ORF1ab/nsp8145T145IaCaaTa11B.1.177.820.000477
ORF1ab/nsp8145T145delACA---11B.1.177.90.001332
ORF1ab/nsp8145T145TacAacT11B.1.1940.04
ORF1ab/nsp8145T145TacAacT11B.1.20.000009
ORF1ab/nsp8145T145del1acAac-11B.1.20.000009
ORF1ab/nsp8145T145IaCaaTa11B.1.2100.002132
ORF1ab/nsp8145T145IaCaaTa11B.1.221.30.000833
ORF1ab/nsp8145T145IaCaaTa11B.1.2410.000812
ORF1ab/nsp8145T145TacAacG11B.1.2430.00007
ORF1ab/nsp8145T145KaCaaAa11B.1.2580.000067
ORF1ab/nsp8145T145SaCAaGT11B.1.30.002618
ORF1ab/nsp8145T145RaCaaGa11B.1.30.002618
ORF1ab/nsp8145T145TacAacT11B.1.30.002618
ORF1ab/nsp8145T145IaCaaTa11B.1.30.002618
ORF1ab/nsp8145T145IaCaaTa11B.1.3130.006579
ORF1ab/nsp8145T145TacAacG11B.1.3510.00003
ORF1ab/nsp8145T145IaCaaTa11B.1.36.100.004785
ORF1ab/nsp8145T145TacAacT11B.1.36.160.001425
ORF1ab/nsp8145T145IaCaaTa11B.1.36.170.000494
ORF1ab/nsp8145T145TacAacC11B.1.36.180.00042
ORF1ab/nsp8145T145IaCaaTa11B.1.36.360.000602
ORF1ab/nsp8145T145IaCaaTa11B.1.3620.001541
ORF1ab/nsp8145T145IaCaaTa11B.1.370.014706
ORF1ab/nsp8145T145IaCaaTa11B.1.3790.017241
ORF1ab/nsp8145T145AAcaGca11B.1.390.003906
ORF1ab/nsp8145T145IaCaaTa11B.1.390.003906
ORF1ab/nsp8145T145IaCaaTa11B.1.3930.028571
ORF1ab/nsp8145T145AAcaGca11B.1.4020.009804
ORF1ab/nsp8145T145IaCaaTa11B.1.4110.003704
ORF1ab/nsp8145T145TacAacG11B.1.4270.00005
ORF1ab/nsp8145T145IaCaaTa11B.1.4280.00102
ORF1ab/nsp8145T145IaCaaTa11B.1.4530.003236
ORF1ab/nsp8145T145IaCaaTa11B.1.5030.002488
ORF1ab/nsp8145T145IaCaaTa11B.1.5200.021739
ORF1ab/nsp8145T145TacAacG11B.1.5260.000024
ORF1ab/nsp8145T145IaCaaTa11B.1.5430.01
ORF1ab/nsp8145T145IaCaaTa11B.1.5750.000303
ORF1ab/nsp8145T145IaCaaTa11B.1.5800.004065
ORF1ab/nsp8145T145IaCaaTa11B.1.5900.004545
ORF1ab/nsp8145T145AAcaGca11B.1.5960.000087
ORF1ab/nsp8145T145MaCAaTG11B.1.617.10.000129
ORF1ab/nsp8145T145LACACTT11B.1.617.10.000129
ORF1ab/nsp8145T145delACA---11B.1.617.20.000004
ORF1ab/nsp8145T145IaCaaTa11B.1.6200.000946
ORF1ab/nsp8145T145TacAacG11B.1.6210.000089
ORF1ab/nsp8145T145IaCaaTa11B.1.810.021277
ORF1ab/nsp8145T145IaCaaTa11B.1.930.000934
ORF1ab/nsp8145T145IaCaaTa11B.110.005128
ORF1ab/nsp8145T145IaCaaTa11B.30.000831
ORF1ab/nsp8145T145IaCaaTa11B.4.10.018868
ORF1ab/nsp8145T145IaCaaTa11B.450.003831
ORF1ab/nsp8145T145PAcaCca11B.60.00091
ORF1ab/nsp8145T145IaCaaTa11C.10.002392
ORF1ab/nsp8145T145IaCaaTa11C.180.002591
ORF1ab/nsp8145T145IaCaaTa11C.290.0625
ORF1ab/nsp8145T145TacAacG11C.350.000774
ORF1ab/nsp8145T145delACA---11C.360.000911
ORF1ab/nsp8145T145delACA---11N.40.004255
ORF1ab/nsp8145T145IaCaaTa11N.50.001767
ORF1ab/nsp8145T145RaCaaGa11P.10.000016
ORF1ab/nsp8145T145IaCaaTa11P.1.17.10.000875
ORF1ab/nsp8145T145IaCaaTa11P.1.20.001156
ORF1ab/nsp8145T145IaCaaTa11P.1.60.001946
ORF1ab/nsp8145T145IaCaaTa11P.1.80.004785
ORF1ab/nsp8145T145delACA---11Q.10.000126
ORF1ab/nsp8145T145TacAacT11Q.10.000126
ORF1ab/nsp8145T145delACA---11Q.80.000165
ORF1ab/nsp8145T145TacAacG11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.