CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 138

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8138Y138HY4080HnonsynTatCat10111011112503-12505
ORF1ab/nsp8138Y138YY4080YsyntaTtaC901901112503-12505
ORF1ab/nsp8138Y138CY4080CnonsyntAttGt126126112503-12505
ORF1ab/nsp8138Y138delY4080deldelTAT---4040112503-12505
ORF1ab/nsp8138Y138del1Y4080del1delTat-at1290.7512503-12505
ORF1ab/nsp8138Y138del1Y4080del1deltaTta-1220.16666712503-12505
ORF1ab/nsp8138Y138del1Y4080del1deltAtt-t1210.083333312503-12505
ORF1ab/nsp8138Y138XY4080XnonsyntaTtaA740.57142912503-12505
ORF1ab/nsp8138Y138XY4080XnonsyntaTtaG730.42857112503-12505
ORF1ab/nsp8138Y138VY4080VnonsynTAtGTt530.612503-12505
ORF1ab/nsp8138Y138VY4080VnonsynTATGTC520.412503-12505
ORF1ab/nsp8138Y138FY4080FnonsyntAttTt33112503-12505
ORF1ab/nsp8138Y138del2Y4080del2delTAt--t22112503-12505
ORF1ab/nsp8138Y138GY4080GnonsynTAtGGt22112503-12505
ORF1ab/nsp8138Y138SY4080SnonsyntAttCt11112503-12505
ORF1ab/nsp8138Y138NY4080NnonsynTatAat11112503-12505

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8138Y138HTatCat10111011All0.000193
ORF1ab/nsp8138Y138YtaTtaC901901All0.000172
ORF1ab/nsp8138Y138HTatCat489489B.1.1.4480.993902
ORF1ab/nsp8138Y138YtaTtaC299299AY.250.001798
ORF1ab/nsp8138Y138HTatCat296296B.1.1.540.89426
ORF1ab/nsp8138Y138YtaTtaC139139AY.440.000846
ORF1ab/nsp8138Y138CtAttGt126126All0.000024
ORF1ab/nsp8138Y138YtaTtaC9595B.1.617.20.000358
ORF1ab/nsp8138Y138YtaTtaC8383AY.1030.000515
ORF1ab/nsp8138Y138YtaTtaC5757AY.230.003976
ORF1ab/nsp8138Y138YtaTtaC4848B.1.1.70.000043
ORF1ab/nsp8138Y138HTatCat4747AY.1030.000292
ORF1ab/nsp8138Y138delTAT---4040All0.000008
ORF1ab/nsp8138Y138YtaTtaC4040AY.1180.002506
ORF1ab/nsp8138Y138YtaTtaC3939AY.9.20.001432
ORF1ab/nsp8138Y138CtAttGt3333AY.420.001328
ORF1ab/nsp8138Y138HTatCat3333B.10.000302
ORF1ab/nsp8138Y138YtaTtaC2727AY.750.001513
ORF1ab/nsp8138Y138HTatCat2727B.1.10.00049
ORF1ab/nsp8138Y138CtAttGt2727B.1.258.140.026471
ORF1ab/nsp8138Y138YtaTtaC1515AY.46.60.001083
ORF1ab/nsp8138Y138delTAT---1515B.1.1.70.000013
ORF1ab/nsp8138Y138CtAttGt1414AY.40.000022
ORF1ab/nsp8138Y138HTatCat1414B.1.1.70.000013
ORF1ab/nsp8138Y138del1Tat-at912All0.000002
ORF1ab/nsp8138Y138del1taTta-212All0
ORF1ab/nsp8138Y138del1tAtt-t112All0
ORF1ab/nsp8138Y138HTatCat1212AY.430.000053
ORF1ab/nsp8138Y138YtaTtaC99AY.40.000014
ORF1ab/nsp8138Y138HTatCat88AY.40.000012
ORF1ab/nsp8138Y138XtaTtaA47All0.000001
ORF1ab/nsp8138Y138XtaTtaG37All0.000001
ORF1ab/nsp8138Y138CtAttGt77AY.1170.000592
ORF1ab/nsp8138Y138CtAttGt66B.1.1.5190.000238
ORF1ab/nsp8138Y138HTatCat66B.1.20.000053
ORF1ab/nsp8138Y138HTatCat66B.1.4430.028037
ORF1ab/nsp8138Y138HTatCat66B.1.617.20.000023
ORF1ab/nsp8138Y138HTatCat66P.1.130.005391
ORF1ab/nsp8138Y138VTAtGTt35All0.000001
ORF1ab/nsp8138Y138VTATGTC25All0
ORF1ab/nsp8138Y138YtaTtaC55B.1.6210.000443
ORF1ab/nsp8138Y138HTatCat44AY.250.000024
ORF1ab/nsp8138Y138CtAttGt44AY.250.000024
ORF1ab/nsp8138Y138HTatCat44AY.340.000388
ORF1ab/nsp8138Y138YtaTtaC44AY.430.000018
ORF1ab/nsp8138Y138delTAT---44AY.430.000018
ORF1ab/nsp8138Y138CtAttGt44B.1.1.70.000004
ORF1ab/nsp8138Y138HTatCat44B.1.1770.000053
ORF1ab/nsp8138Y138CtAttGt44P.1.100.001078
ORF1ab/nsp8138Y138FtAttTt33All0.000001
ORF1ab/nsp8138Y138CtAttGt33AY.260.000085
ORF1ab/nsp8138Y138HTatCat33AY.39.10.000119
ORF1ab/nsp8138Y138HTatCat33AY.440.000018
ORF1ab/nsp8138Y138YtaTtaC33AY.460.000312
ORF1ab/nsp8138Y138del1Tat-at33B.10.000027
ORF1ab/nsp8138Y138HTatCat33B.1.1.1660.1
ORF1ab/nsp8138Y138YtaTtaC33B.1.20.000026
ORF1ab/nsp8138Y138CtAttGt33B.1.617.20.000011
ORF1ab/nsp8138Y138HTatCat33P.10.000047
ORF1ab/nsp8138Y138YtaTtaC33P.10.000047
ORF1ab/nsp8138Y138XtaTtaG220.111111
ORF1ab/nsp8138Y138del2TAt--t220.111111
ORF1ab/nsp8138Y138VTATGTC220.111111
ORF1ab/nsp8138Y138CtAttGt220.111111
ORF1ab/nsp8138Y138GTAtGGt22All0
ORF1ab/nsp8138Y138del2TAt--t22All0
ORF1ab/nsp8138Y138CtAttGt22AY.1000.000092
ORF1ab/nsp8138Y138YtaTtaC22AY.1020.000053
ORF1ab/nsp8138Y138HTatCat22AY.1020.000053
ORF1ab/nsp8138Y138YtaTtaC22AY.390.000049
ORF1ab/nsp8138Y138HTatCat22AY.390.000049
ORF1ab/nsp8138Y138delTAT---22AY.750.000112
ORF1ab/nsp8138Y138YtaTtaC22B.1.10.000036
ORF1ab/nsp8138Y138YtaTtaC22B.1.1.3690.000892
ORF1ab/nsp8138Y138GTAtGGt22B.1.1.70.000002
ORF1ab/nsp8138Y138XtaTtaA22B.1.1.70.000002
ORF1ab/nsp8138Y138HTatCat22B.1.1600.000062
ORF1ab/nsp8138Y138YtaTtaC22B.1.177.280.014815
ORF1ab/nsp8138Y138del1tAtt-t12B.1.20.000009
ORF1ab/nsp8138Y138del1Tat-at12B.1.20.000009
ORF1ab/nsp8138Y138YtaTtaC22B.1.2210.000142
ORF1ab/nsp8138Y138HTatCat22B.1.2400.000431
ORF1ab/nsp8138Y138HTatCat22B.1.3510.000059
ORF1ab/nsp8138Y138CtAttGt22B.1.5950.000522
ORF1ab/nsp8138Y138HTatCat22B.1.5960.000174
ORF1ab/nsp8138Y138CtAttGt22C.370.000232
ORF1ab/nsp8138Y138delTAT---11A0.000387
ORF1ab/nsp8138Y138delTAT---11AD.20.000219
ORF1ab/nsp8138Y138CtAttGt11AE.30.032258
ORF1ab/nsp8138Y138NTatAat11All0
ORF1ab/nsp8138Y138StAttCt11All0
ORF1ab/nsp8138Y138YtaTtaC11AY.1110.000183
ORF1ab/nsp8138Y138YtaTtaC11AY.1160.000287
ORF1ab/nsp8138Y138YtaTtaC11AY.1170.000085
ORF1ab/nsp8138Y138CtAttGt11AY.1200.000037
ORF1ab/nsp8138Y138HTatCat11AY.1200.000037
ORF1ab/nsp8138Y138YtaTtaC11AY.140.000088
ORF1ab/nsp8138Y138HTatCat11AY.200.000039
ORF1ab/nsp8138Y138delTAT---11AY.250.000006
ORF1ab/nsp8138Y138del1Tat-at11AY.250.000006
ORF1ab/nsp8138Y138HTatCat11AY.260.000028
ORF1ab/nsp8138Y138CtAttGt11AY.290.000016
ORF1ab/nsp8138Y138YtaTtaC11AY.30.00001
ORF1ab/nsp8138Y138YtaTtaC11AY.300.000396
ORF1ab/nsp8138Y138YtaTtaC11AY.350.000233
ORF1ab/nsp8138Y138YtaTtaC11AY.380.000499
ORF1ab/nsp8138Y138delTAT---11AY.40.000002
ORF1ab/nsp8138Y138delTAT---11AY.4.50.000107
ORF1ab/nsp8138Y138YtaTtaC11AY.420.00004
ORF1ab/nsp8138Y138CtAttGt11AY.430.000004
ORF1ab/nsp8138Y138CtAttGt11AY.450.000122
ORF1ab/nsp8138Y138delTAT---11AY.460.000104
ORF1ab/nsp8138Y138delTAT---11AY.46.20.000635
ORF1ab/nsp8138Y138HTatCat11AY.470.000031
ORF1ab/nsp8138Y138CtAttGt11AY.470.000031
ORF1ab/nsp8138Y138YtaTtaC11AY.50.000021
ORF1ab/nsp8138Y138YtaTtaC11AY.600.000938
ORF1ab/nsp8138Y138HTatCat11AY.680.000274
ORF1ab/nsp8138Y138HTatCat11AY.7.10.000113
ORF1ab/nsp8138Y138HTatCat11AY.750.000056
ORF1ab/nsp8138Y138delTAT---11AY.80.000606
ORF1ab/nsp8138Y138HTatCat11AY.830.001724
ORF1ab/nsp8138Y138CtAttGt11AY.9.10.000084
ORF1ab/nsp8138Y138HTatCat11B0.000128
ORF1ab/nsp8138Y138FtAttTt11B0.000128
ORF1ab/nsp8138Y138NTatAat11B.10.000009
ORF1ab/nsp8138Y138XtaTtaA11B.10.000009
ORF1ab/nsp8138Y138delTAT---11B.10.000009
ORF1ab/nsp8138Y138YtaTtaC11B.10.000009
ORF1ab/nsp8138Y138FtAttTt11B.1.10.000018
ORF1ab/nsp8138Y138CtAttGt11B.1.10.000018
ORF1ab/nsp8138Y138delTAT---11B.1.10.000018
ORF1ab/nsp8138Y138XtaTtaA11B.1.10.000018
ORF1ab/nsp8138Y138del1taTta-11B.1.1.10.000327
ORF1ab/nsp8138Y138YtaTtaC11B.1.1.2220.000204
ORF1ab/nsp8138Y138HTatCat11B.1.1.2730.006757
ORF1ab/nsp8138Y138delTAT---11B.1.1.280.000311
ORF1ab/nsp8138Y138HTatCat11B.1.1.390.00051
ORF1ab/nsp8138Y138YtaTtaC11B.1.1.3980.003226
ORF1ab/nsp8138Y138HTatCat11B.1.1.4090.002833
ORF1ab/nsp8138Y138del1Tat-at11B.1.1.4480.002033
ORF1ab/nsp8138Y138delTAT---11B.1.1.4480.002033
ORF1ab/nsp8138Y138CtAttGt11B.1.1.4640.001473
ORF1ab/nsp8138Y138YtaTtaC11B.1.1.5190.00004
ORF1ab/nsp8138Y138HTatCat11B.1.1.5230.001563
ORF1ab/nsp8138Y138VTAtGTt11B.1.1.70.000001
ORF1ab/nsp8138Y138YtaTtaC11B.1.1.700.000341
ORF1ab/nsp8138Y138StAttCt11B.1.1.700.000341
ORF1ab/nsp8138Y138del1Tat-at11B.1.1600.000031
ORF1ab/nsp8138Y138YtaTtaC11B.1.160.220.006757
ORF1ab/nsp8138Y138delTAT---11B.1.1770.000013
ORF1ab/nsp8138Y138HTatCat11B.1.177.210.000076
ORF1ab/nsp8138Y138HTatCat11B.1.177.730.000566
ORF1ab/nsp8138Y138HTatCat11B.1.177.860.000183
ORF1ab/nsp8138Y138delTAT---11B.1.177.90.001332
ORF1ab/nsp8138Y138VTAtGTt11B.1.20.000009
ORF1ab/nsp8138Y138delTAT---11B.1.20.000009
ORF1ab/nsp8138Y138HTatCat11B.1.2060.000816
ORF1ab/nsp8138Y138del1taTta-11B.1.2210.000071
ORF1ab/nsp8138Y138CtAttGt11B.1.360.000146
ORF1ab/nsp8138Y138HTatCat11B.1.3620.001541
ORF1ab/nsp8138Y138XtaTtaG11B.1.4620.007246
ORF1ab/nsp8138Y138YtaTtaC11B.1.4700.001404
ORF1ab/nsp8138Y138VTAtGTt11B.1.5090.000866
ORF1ab/nsp8138Y138HTatCat11B.1.5250.000113
ORF1ab/nsp8138Y138HTatCat11B.1.5260.000024
ORF1ab/nsp8138Y138del1Tat-at11B.1.5260.000024
ORF1ab/nsp8138Y138del1Tat-at11B.1.5960.000087
ORF1ab/nsp8138Y138HTatCat11B.1.617.10.000129
ORF1ab/nsp8138Y138delTAT---11B.1.617.20.000004
ORF1ab/nsp8138Y138CtAttGt11B.1.6210.000089
ORF1ab/nsp8138Y138CtAttGt11B.1.6370.000073
ORF1ab/nsp8138Y138HTatCat11B.1.760.011364
ORF1ab/nsp8138Y138HTatCat11B.6.60.000889
ORF1ab/nsp8138Y138HTatCat11C.350.000774
ORF1ab/nsp8138Y138delTAT---11C.360.000911
ORF1ab/nsp8138Y138HTatCat11D.20.000075
ORF1ab/nsp8138Y138delTAT---11N.40.004255
ORF1ab/nsp8138Y138FtAttTt11P.10.000016
ORF1ab/nsp8138Y138CtAttGt11P.1.120.000484
ORF1ab/nsp8138Y138YtaTtaC11P.1.120.000484
ORF1ab/nsp8138Y138YtaTtaC11P.1.140.000048
ORF1ab/nsp8138Y138delTAT---11Q.80.000165