CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 130

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp8130V130IV4072InonsynGttAtt14081408112479-12481
ORF1ab/nsp8130V130VV4072VsyngtTgtC99880.88888912479-12481
ORF1ab/nsp8130V130VV4072VsyngtTgtA99100.1010112479-12481
ORF1ab/nsp8130V130VV4072VsyngtTgtG9910.01010112479-12481
ORF1ab/nsp8130V130AV4072AnonsyngTtgCt6666112479-12481
ORF1ab/nsp8130V130delV4072deldelGTT---3030112479-12481
ORF1ab/nsp8130V130FV4072FnonsynGttTtt3030112479-12481
ORF1ab/nsp8130V130GV4072GnonsyngTtgGt540.812479-12481
ORF1ab/nsp8130V130GV4072GnonsyngTTgGA510.212479-12481
ORF1ab/nsp8130V130DV4072DnonsyngTtgAt33112479-12481
ORF1ab/nsp8130V130LV4072LnonsynGttCtt320.66666712479-12481
ORF1ab/nsp8130V130LV4072LnonsynGtTCtA310.33333312479-12481
ORF1ab/nsp8130V130CV4072CnonsynGTtTGt22112479-12481
ORF1ab/nsp8130V130del2V4072del2delgTTg--11112479-12481
ORF1ab/nsp8130V130del1V4072del1delGtt-tt11112479-12481
ORF1ab/nsp8130V130SV4072SnonsynGTTTCG11112479-12481
ORF1ab/nsp8130V130KV4072KnonsynGTTAAA11112479-12481

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp8130V130IGttAtt14081408All0.000269
ORF1ab/nsp8130V130IGttAtt794794AY.800.896163
ORF1ab/nsp8130V130IGttAtt289289AY.200.011232
ORF1ab/nsp8130V130IGttAtt120120B.1.1.70.000107
ORF1ab/nsp8130V130VgtTgtC8899All0.000017
ORF1ab/nsp8130V130VgtTgtA1099All0.000002
ORF1ab/nsp8130V130VgtTgtG199All0
ORF1ab/nsp8130V130AgTtgCt6666All0.000013
ORF1ab/nsp8130V130IGttAtt5050AY.1020.001326
ORF1ab/nsp8130V130FGttTtt3030All0.000006
ORF1ab/nsp8130V130delGTT---3030All0.000006
ORF1ab/nsp8130V130VgtTgtC1818AY.40.000028
ORF1ab/nsp8130V130FGttTtt1313AY.40.00002
ORF1ab/nsp8130V130IGttAtt1212AY.46.20.007624
ORF1ab/nsp8130V130IGttAtt1111AY.4.20.000239
ORF1ab/nsp8130V130AgTtgCt1111B.1.1.70.00001
ORF1ab/nsp8130V130delGTT---1111B.1.1.70.00001
ORF1ab/nsp8130V130VgtTgtC1111B.1.617.20.000041
ORF1ab/nsp8130V130IGttAtt1010AY.40.000016
ORF1ab/nsp8130V130VgtTgtC99AY.1030.000056
ORF1ab/nsp8130V130VgtTgtC79B.1.1.70.000006
ORF1ab/nsp8130V130VgtTgtA29B.1.1.70.000002
ORF1ab/nsp8130V130AgTtgCt88AY.430.000035
ORF1ab/nsp8130V130IGttAtt88B.10.000073
ORF1ab/nsp8130V130AgTtgCt88B.1.20.00007
ORF1ab/nsp8130V130IGttAtt88B.1.3510.000238
ORF1ab/nsp8130V130IGttAtt88B.1.5260.000188
ORF1ab/nsp8130V130IGttAtt77AY.116.10.00218
ORF1ab/nsp8130V130VgtTgtC77AY.1200.00026
ORF1ab/nsp8130V130IGttAtt77AY.440.000043
ORF1ab/nsp8130V130IGttAtt77Q.80.001154
ORF1ab/nsp8130V130IGttAtt66AY.30.00006
ORF1ab/nsp8130V130GgTtgGt45All0.000001
ORF1ab/nsp8130V130GgTTgGA15All0
ORF1ab/nsp8130V130AgTtgCt55AY.1180.000313
ORF1ab/nsp8130V130IGttAtt55AY.430.000022
ORF1ab/nsp8130V130FGttTtt55B.10.000046
ORF1ab/nsp8130V130VgtTgtC55B.1.1770.000066
ORF1ab/nsp8130V130AgTtgCt55B.1.1770.000066
ORF1ab/nsp8130V130IGttAtt55B.1.617.20.000019
ORF1ab/nsp8130V130IGttAtt44AY.1030.000025
ORF1ab/nsp8130V130IGttAtt44AY.230.000279
ORF1ab/nsp8130V130AgTtgCt44AY.40.000006
ORF1ab/nsp8130V130IGttAtt44B.1.1.2220.000816
ORF1ab/nsp8130V130DgTtgAt33All0.000001
ORF1ab/nsp8130V130LGttCtt23All0
ORF1ab/nsp8130V130LGtTCtA13All0
ORF1ab/nsp8130V130VgtTgtC33AY.1000.000138
ORF1ab/nsp8130V130VgtTgtC33AY.46.40.000494
ORF1ab/nsp8130V130VgtTgtC33B.10.000027
ORF1ab/nsp8130V130AgTtgCt33B.10.000027
ORF1ab/nsp8130V130VgtTgtC33B.1.1.1590.014019
ORF1ab/nsp8130V130IGttAtt33B.1.20.000026
ORF1ab/nsp8130V130AgTtgCt33B.1.2320.001612
ORF1ab/nsp8130V130CGTtTGt22All0
ORF1ab/nsp8130V130IGttAtt22AY.1180.000125
ORF1ab/nsp8130V130IGttAtt22AY.1190.000071
ORF1ab/nsp8130V130AgTtgCt22AY.250.000012
ORF1ab/nsp8130V130delGTT---22AY.250.000012
ORF1ab/nsp8130V130IGttAtt22AY.260.000057
ORF1ab/nsp8130V130IGttAtt22AY.290.000032
ORF1ab/nsp8130V130VgtTgtC22AY.390.000049
ORF1ab/nsp8130V130IGttAtt22AY.390.000049
ORF1ab/nsp8130V130delGTT---22AY.430.000009
ORF1ab/nsp8130V130IGttAtt22AY.470.000062
ORF1ab/nsp8130V130IGttAtt22AY.50.000041
ORF1ab/nsp8130V130delGTT---22AY.750.000112
ORF1ab/nsp8130V130LGttCtt22B.10.000018
ORF1ab/nsp8130V130VgtTgtA22B.1.1.4200.002012
ORF1ab/nsp8130V130AgTtgCt22B.1.1.4860.003155
ORF1ab/nsp8130V130DgTtgAt22B.1.1.70.000002
ORF1ab/nsp8130V130IGttAtt22B.1.1600.000062
ORF1ab/nsp8130V130AgTtgCt22B.1.2430.000139
ORF1ab/nsp8130V130IGttAtt22B.1.3910.002255
ORF1ab/nsp8130V130AgTtgCt22B.1.617.20.000008
ORF1ab/nsp8130V130AgTtgCt22B.1.6370.000146
ORF1ab/nsp8130V130VgtTgtC22P.10.000032
ORF1ab/nsp8130V130IGttAtt22P.10.000032
ORF1ab/nsp8130V130IGttAtt22P.30.00319
ORF1ab/nsp8130V130IGttAtt11A.220.066667
ORF1ab/nsp8130V130delGTT---11AD.20.000219
ORF1ab/nsp8130V130del2gTTg--11All0
ORF1ab/nsp8130V130KGTTAAA11All0
ORF1ab/nsp8130V130SGTTTCG11All0
ORF1ab/nsp8130V130del1Gtt-tt11All0
ORF1ab/nsp8130V130VgtTgtC11AP.10.001502
ORF1ab/nsp8130V130VgtTgtC11AY.1190.000035
ORF1ab/nsp8130V130SGTTTCG11AY.1190.000035
ORF1ab/nsp8130V130delGTT---11AY.1200.000037
ORF1ab/nsp8130V130IGttAtt11AY.240.000431
ORF1ab/nsp8130V130IGttAtt11AY.250.000006
ORF1ab/nsp8130V130VgtTgtC11AY.250.000006
ORF1ab/nsp8130V130FGttTtt11AY.30.00001
ORF1ab/nsp8130V130AgTtgCt11AY.350.000233
ORF1ab/nsp8130V130CGTtTGt11AY.40.000002
ORF1ab/nsp8130V130VgtTgtC11AY.4.20.000022
ORF1ab/nsp8130V130IGttAtt11AY.410.000294
ORF1ab/nsp8130V130VgtTgtA11AY.430.000004
ORF1ab/nsp8130V130VgtTgtC11AY.440.000006
ORF1ab/nsp8130V130AgTtgCt11AY.440.000006
ORF1ab/nsp8130V130delGTT---11AY.460.000104
ORF1ab/nsp8130V130IGttAtt11AY.46.60.000072
ORF1ab/nsp8130V130VgtTgtA11AY.470.000031
ORF1ab/nsp8130V130delGTT---11AY.50.000021
ORF1ab/nsp8130V130IGttAtt11AY.540.000095
ORF1ab/nsp8130V130IGttAtt11AY.550.000917
ORF1ab/nsp8130V130delGTT---11AY.80.000606
ORF1ab/nsp8130V130GgTTgGA11AY.850.000427
ORF1ab/nsp8130V130IGttAtt11AY.850.000427
ORF1ab/nsp8130V130VgtTgtA11AY.850.000427
ORF1ab/nsp8130V130LGtTCtA11AY.850.000427
ORF1ab/nsp8130V130VgtTgtA11AY.98.10.000048
ORF1ab/nsp8130V130FGttTtt11AY.98.10.000048
ORF1ab/nsp8130V130IGttAtt11AY.99.20.000092
ORF1ab/nsp8130V130del2gTTg--11B.10.000009
ORF1ab/nsp8130V130IGttAtt11B.1.10.000018
ORF1ab/nsp8130V130FGttTtt11B.1.10.000018
ORF1ab/nsp8130V130VgtTgtC11B.1.10.000018
ORF1ab/nsp8130V130delGTT---11B.1.1.1390.022727
ORF1ab/nsp8130V130VgtTgtC11B.1.1.2200.001859
ORF1ab/nsp8130V130delGTT---11B.1.1.280.000311
ORF1ab/nsp8130V130IGttAtt11B.1.1.2840.000107
ORF1ab/nsp8130V130IGttAtt11B.1.1.330.000421
ORF1ab/nsp8130V130delGTT---11B.1.1.4480.002033
ORF1ab/nsp8130V130AgTtgCt11B.1.1.4560.055556
ORF1ab/nsp8130V130KGTTAAA11B.1.1.5190.00004
ORF1ab/nsp8130V130DgTtgAt11B.1.1.5190.00004
ORF1ab/nsp8130V130del1Gtt-tt11B.1.1.70.000001
ORF1ab/nsp8130V130IGttAtt11B.1.1170.0125
ORF1ab/nsp8130V130FGttTtt11B.1.1770.000013
ORF1ab/nsp8130V130IGttAtt11B.1.1770.000013
ORF1ab/nsp8130V130VgtTgtC11B.1.177.380.010417
ORF1ab/nsp8130V130VgtTgtC11B.1.177.560.000668
ORF1ab/nsp8130V130AgTtgCt11B.1.177.830.001481
ORF1ab/nsp8130V130delGTT---11B.1.177.90.001332
ORF1ab/nsp8130V130FGttTtt11B.1.20.000009
ORF1ab/nsp8130V130delGTT---11B.1.20.000009
ORF1ab/nsp8130V130IGttAtt11B.1.2180.005155
ORF1ab/nsp8130V130IGttAtt11B.1.2210.000071
ORF1ab/nsp8130V130FGttTtt11B.1.2220.001692
ORF1ab/nsp8130V130IGttAtt11B.1.2390.001221
ORF1ab/nsp8130V130FGttTtt11B.1.2580.000067
ORF1ab/nsp8130V130GgTtgGt11B.1.258.30.001675
ORF1ab/nsp8130V130VgtTgtA11B.1.258.70.001912
ORF1ab/nsp8130V130VgtTgtG11B.1.3130.006579
ORF1ab/nsp8130V130GgTtgGt11B.1.3360.002439
ORF1ab/nsp8130V130CGTtTGt11B.1.3510.00003
ORF1ab/nsp8130V130FGttTtt11B.1.3510.00003
ORF1ab/nsp8130V130VgtTgtC11B.1.360.000146
ORF1ab/nsp8130V130GgTtgGt11B.1.360.000146
ORF1ab/nsp8130V130IGttAtt11B.1.36.180.00042
ORF1ab/nsp8130V130IGttAtt11B.1.4270.00005
ORF1ab/nsp8130V130AgTtgCt11B.1.4290.000024
ORF1ab/nsp8130V130IGttAtt11B.1.4290.000024
ORF1ab/nsp8130V130FGttTtt11B.1.438.10.000107
ORF1ab/nsp8130V130AgTtgCt11B.1.5750.000303
ORF1ab/nsp8130V130VgtTgtA11B.1.5770.000687
ORF1ab/nsp8130V130FGttTtt11B.1.5960.000087
ORF1ab/nsp8130V130AgTtgCt11B.1.617.10.000129
ORF1ab/nsp8130V130FGttTtt11B.1.617.20.000004
ORF1ab/nsp8130V130delGTT---11B.1.617.20.000004
ORF1ab/nsp8130V130VgtTgtC11B.1.619.10.000641
ORF1ab/nsp8130V130IGttAtt11B.1.6210.000089
ORF1ab/nsp8130V130VgtTgtC11B.1.6210.000089
ORF1ab/nsp8130V130FGttTtt11B.1.6270.00202
ORF1ab/nsp8130V130GgTtgGt11B.60.00091
ORF1ab/nsp8130V130delGTT---11C.360.000911
ORF1ab/nsp8130V130IGttAtt11C.36.3.10.002717
ORF1ab/nsp8130V130AgTtgCt11D.20.000075
ORF1ab/nsp8130V130VgtTgtC11D.20.000075
ORF1ab/nsp8130V130delGTT---11N.40.004255
ORF1ab/nsp8130V130AgTtgCt11P.10.000016
ORF1ab/nsp8130V130IGttAtt11P.20.000187
ORF1ab/nsp8130V130IGttAtt11Q.10.000126
ORF1ab/nsp8130V130VgtTgtC11Q.70.001111
ORF1ab/nsp8130V130VgtTgtC11U.20.008772