CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp8 | 108 | N108N | N4050N | syn | aaC | aaT | 1819 | 1819 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108Y | N4050Y | nonsyn | Aac | Tac | 332 | 332 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108H | N4050H | nonsyn | Aac | Cac | 326 | 326 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108D | N4050D | nonsyn | Aac | Gac | 62 | 61 | 0.983871 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108D | N4050D | nonsyn | AaC | GaT | 62 | 1 | 0.016129 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108I | N4050I | nonsyn | aAc | aTc | 29 | 29 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108S | N4050S | nonsyn | aAc | aGc | 28 | 28 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108del | N4050del | del | AAC | --- | 9 | 9 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108T | N4050T | nonsyn | aAc | aCc | 8 | 7 | 0.875 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108K | N4050K | nonsyn | aaC | aaA | 8 | 7 | 0.875 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108T | N4050T | nonsyn | aAC | aCT | 8 | 1 | 0.125 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108K | N4050K | nonsyn | aaC | aaG | 8 | 1 | 0.125 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108del1 | N4050del1 | del | Aac | -ac | 3 | 3 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108A | N4050A | nonsyn | AAc | GCc | 2 | 1 | 0.5 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108A | N4050A | nonsyn | AAC | GCT | 2 | 1 | 0.5 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108V | N4050V | nonsyn | AAc | GTc | 1 | 1 | 1 | 12413-12415 |
ORF1ab/nsp8 | 108 | N108R | N4050R | nonsyn | AAc | CGc | 1 | 1 | 1 | 12413-12415 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1819 | 1819 | All | 0.000348 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 342 | 342 | B.1.177 | 0.004503 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 332 | 332 | All | 0.000063 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 328 | 328 | B.1.22 | 0.432148 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 326 | 326 | All | 0.000062 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 324 | 324 | B.1.1.7 | 0.00029 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 176 | 176 | AY.4 | 0.000274 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 134 | 134 | AY.4 | 0.000209 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 93 | 93 | B.1.2 | 0.000819 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 86 | 86 | Q.4 | 0.039109 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 73 | 73 | AY.99.2 | 0.006727 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 69 | 69 | B.1.1.7 | 0.000062 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 61 | 62 | All | 0.000012 |
ORF1ab/nsp8 | 108 | N108D | AaC | GaT | 1 | 62 | All | 0 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 59 | 59 | B.1.617.2 | 0.000222 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 55 | 55 | B.1.351 | 0.001635 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 38 | 38 | P.1 | 0.000599 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 35 | 35 | B.1 | 0.000321 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 34 | 34 | B.1.234 | 0.004486 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 32 | 32 | B.1.22.1 | 1 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 32 | 32 | B.1.596 | 0.002788 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 29 | 29 | All | 0.000006 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 28 | 28 | All | 0.000005 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 28 | 28 | B.1.1 | 0.000508 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 27 | 27 | AY.47 | 0.00084 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 24 | 24 | B.1.234 | 0.003167 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 22 | 22 | AY.120.2.1 | 0.010962 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 22 | 22 | B.1.577 | 0.01512 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 20 | 20 | B.1.2 | 0.000176 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 17 | 17 | B.1.429 | 0.0004 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 17 | 17 | P.2 | 0.003173 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 16 | 16 | AY.43 | 0.000071 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 16 | 16 | P.1.14 | 0.000765 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 14 | 14 | B.1 | 0.000128 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 13 | 13 | AY.44 | 0.000079 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 12 | 12 | B.1.526 | 0.000282 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 11 | 11 | AY.103 | 0.000068 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 11 | 11 | P.1.15 | 0.002556 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 10 | 10 | AY.3 | 0.000099 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 10 | 10 | P.1 | 0.000158 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 10 | 10 | Q.1 | 0.001263 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 9 | 9 | All | 0.000002 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 9 | 9 | B.1.351.3 | 0.007888 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 7 | 8 | All | 0.000001 |
ORF1ab/nsp8 | 108 | N108T | aAc | aCc | 7 | 8 | All | 0.000001 |
ORF1ab/nsp8 | 108 | N108T | aAC | aCT | 1 | 8 | All | 0 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaG | 1 | 8 | All | 0 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 8 | 8 | AY.4.2 | 0.000174 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 8 | 8 | B.1.1 | 0.000145 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 8 | 8 | B.1.1.25 | 0.004548 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 7 | 7 | B.1.311 | 0.001922 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 7 | 7 | B.1.588 | 0.006369 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 6 | 6 | AY.20 | 0.000233 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 5 | 5 | B.1.574 | 0.010753 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 5 | 5 | B.1.582 | 0.002453 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 4 | 4 | AY.26 | 0.000113 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 4 | 4 | B.1.1.56 | 0.071429 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp8 | 108 | N108del1 | Aac | -ac | 3 | 3 | All | 0.000001 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 3 | 3 | AY.29 | 0.000047 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 3 | 3 | B.1.1.519 | 0.000119 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 3 | 3 | B.1.556 | 0.022556 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 3 | 3 | B.1.565 | 0.002431 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 2 | 2 | A.2.4 | 0.006734 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 2 | 2 | A.2.4 | 0.006734 |
ORF1ab/nsp8 | 108 | N108A | AAC | GCT | 1 | 2 | All | 0 |
ORF1ab/nsp8 | 108 | N108A | AAc | GCc | 1 | 2 | All | 0 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp8 | 108 | N108T | aAc | aCc | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B | 0.000256 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp8 | 108 | N108T | aAc | aCc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.1.337 | 0.007194 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp8 | 108 | N108T | aAc | aCc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.265 | 0.002541 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp8 | 108 | N108A | AAC | GCT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108T | aAC | aCT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108T | aAc | aCc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108D | AaC | GaT | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108A | AAc | GCc | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp8 | 108 | N108del1 | Aac | -ac | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 1 | 1 | 0.055556 | |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp8 | 108 | N108R | AAc | CGc | 1 | 1 | All | 0 |
ORF1ab/nsp8 | 108 | N108V | AAc | GTc | 1 | 1 | All | 0 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | B | 0.000128 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp8 | 108 | N108V | AAc | GTc | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.1.288 | 0.001916 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.320 | 0.018182 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.1.518 | 0.006329 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.110 | 0.004525 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.160.10 | 0.008065 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.160.17 | 0.001701 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.160.22 | 0.006757 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.400.1 | 0.015152 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp8 | 108 | N108D | Aac | Gac | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.438.4 | 0.021277 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp8 | 108 | N108R | AAc | CGc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.12 | 0.00641 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp8 | 108 | N108S | aAc | aGc | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp8 | 108 | N108K | aaC | aaG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp8 | 108 | N108del | AAC | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp8 | 108 | N108Y | Aac | Tac | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp8 | 108 | N108H | Aac | Cac | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp8 | 108 | N108del1 | Aac | -ac | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp8 | 108 | N108I | aAc | aTc | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp8 | 108 | N108N | aaC | aaT | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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