CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp8 : CodonNum = 10 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp810P10SP3952SnonsynCcaTca895689320.9973212119-12121

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp810P10SCcaTca89328956All0.001708
ORF1ab/nsp810P10SCcaTca50775094B.1.177.810.961189
ORF1ab/nsp810P10SCcaTca594594B.1.1.70.000532
ORF1ab/nsp810P10SCcaTca341341Z.10.985549
ORF1ab/nsp810P10SCcaTca323323AY.40.000503
ORF1ab/nsp810P10SCcaTca255255B.1.1770.003358
ORF1ab/nsp810P10SCcaTca229229B.1.1600.007142
ORF1ab/nsp810P10SCcaTca213213B.1.177.501
ORF1ab/nsp810P10SCcaTca177177B.10.001621
ORF1ab/nsp810P10SCcaTca169169B.1.2580.011246
ORF1ab/nsp810P10SCcaTca132132B.1.20.001162
ORF1ab/nsp810P10SCcaTca109109B.1.617.20.00041
ORF1ab/nsp810P10SCcaTca103103AY.420.004144
ORF1ab/nsp810P10SCcaTca9898B.1.1.3330.10549
ORF1ab/nsp810P10SCcaTca6060AY.30.000597
ORF1ab/nsp810P10SCcaTca5959AY.50.001218
ORF1ab/nsp810P10SCcaTca5757AY.1030.000354
ORF1ab/nsp810P10SCcaTca5757AY.430.000253
ORF1ab/nsp810P10SCcaTca5050AY.250.000301
ORF1ab/nsp810P10SCcaTca4242AY.440.000256
ORF1ab/nsp810P10SCcaTca4141AY.260.001161
ORF1ab/nsp810P10SCcaTca3939B.1.10.000707
ORF1ab/nsp810P10SCcaTca3434B.1.5610.013497
ORF1ab/nsp810P10SCcaTca3232B.1.5170.013664
ORF1ab/nsp810P10SCcaTca3232P.10.000504
ORF1ab/nsp810P10SCcaTca3131B.1.4290.000729
ORF1ab/nsp810P10SCcaTca2929B.1.1.3480.023089
ORF1ab/nsp810P10SCcaTca2626B.1.5960.002266
ORF1ab/nsp810P10SCcaTca2424B.1.2430.00167
ORF1ab/nsp810P10SCcaTca1919B.1.1.5190.000755
ORF1ab/nsp810P10SCcaTca1414AY.390.000346
ORF1ab/nsp810P10SCcaTca1414B.1.1260.017857
ORF1ab/nsp810P10SCcaTca1414B.1.177.600.003058
ORF1ab/nsp810P10SCcaTca1313AY.330.000868
ORF1ab/nsp810P10SCcaTca1313AY.750.000728
ORF1ab/nsp810P10SCcaTca1212B.1.36.290.006208
ORF1ab/nsp810P10SCcaTca1010AY.46.50.001984
ORF1ab/nsp810P10SCcaTca99AY.1170.000761
ORF1ab/nsp810P10SCcaTca99AY.4.20.000195
ORF1ab/nsp810P10SCcaTca88AD.20.001752
ORF1ab/nsp810P10SCcaTca88AY.290.000126
ORF1ab/nsp810P10SCcaTca88AY.870.006661
ORF1ab/nsp810P10SCcaTca88AY.90.000541
ORF1ab/nsp810P10SCcaTca88B.1.1.3620.044944
ORF1ab/nsp810P10SCcaTca88B.1.177.860.001468
ORF1ab/nsp810P10SCcaTca88B.1.2210.000568
ORF1ab/nsp810P10SCcaTca77AY.1000.000322
ORF1ab/nsp810P10SCcaTca77AY.1020.000186
ORF1ab/nsp810P10SCcaTca77AY.39.10.000277
ORF1ab/nsp810P10SCcaTca77B.1.5260.000165
ORF1ab/nsp810P10SCcaTca77C.370.000812
ORF1ab/nsp810P10SCcaTca360.166667
ORF1ab/nsp810P10SCcaTca66AY.200.000233
ORF1ab/nsp810P10SCcaTca66AY.540.000572
ORF1ab/nsp810P10SCcaTca66B.1.2400.001293
ORF1ab/nsp810P10SCcaTca66B.1.4270.000303
ORF1ab/nsp810P10SCcaTca55AY.116.10.001557
ORF1ab/nsp810P10SCcaTca55AY.590.002648
ORF1ab/nsp810P10SCcaTca55AY.9.20.000184
ORF1ab/nsp810P10SCcaTca55B.1.1.3160.004625
ORF1ab/nsp810P10SCcaTca55B.1.1.3730.119048
ORF1ab/nsp810P10SCcaTca55B.1.2370.024876
ORF1ab/nsp810P10SCcaTca55B.1.258.170.00052
ORF1ab/nsp810P10SCcaTca44A.2.50.001996
ORF1ab/nsp810P10SCcaTca44AY.1180.000251
ORF1ab/nsp810P10SCcaTca44AY.1190.000141
ORF1ab/nsp810P10SCcaTca44AY.450.000487
ORF1ab/nsp810P10SCcaTca44AY.610.000419
ORF1ab/nsp810P10SCcaTca44AY.99.20.000369
ORF1ab/nsp810P10SCcaTca44B0.000511
ORF1ab/nsp810P10SCcaTca44B.1.1.2220.000816
ORF1ab/nsp810P10SCcaTca44B.1.177.720.013559
ORF1ab/nsp810P10SCcaTca44B.1.360.000584
ORF1ab/nsp810P10SCcaTca44B.1.5250.000453
ORF1ab/nsp810P10SCcaTca44B.1.5970.018519
ORF1ab/nsp810P10SCcaTca44R.10.00036
ORF1ab/nsp810P10SCcaTca33AY.1200.000112
ORF1ab/nsp810P10SCcaTca33AY.470.000093
ORF1ab/nsp810P10SCcaTca33AY.850.001282
ORF1ab/nsp810P10SCcaTca33B.1.1.4320.003797
ORF1ab/nsp810P10SCcaTca33B.1.177.210.000229
ORF1ab/nsp810P10SCcaTca33B.1.177.730.001699
ORF1ab/nsp810P10SCcaTca33B.1.4710.008197
ORF1ab/nsp810P10SCcaTca33B.1.6280.001057
ORF1ab/nsp810P10SCcaTca22AU.20.004843
ORF1ab/nsp810P10SCcaTca22AY.240.000862
ORF1ab/nsp810P10SCcaTca22AY.34.10.00102
ORF1ab/nsp810P10SCcaTca22AY.660.002139
ORF1ab/nsp810P10SCcaTca22AY.98.10.000097
ORF1ab/nsp810P10SCcaTca22B.1.1.2690.002706
ORF1ab/nsp810P10SCcaTca22B.1.1.2840.000215
ORF1ab/nsp810P10SCcaTca22B.1.1.3120.003824
ORF1ab/nsp810P10SCcaTca22B.1.1.3170.000823
ORF1ab/nsp810P10SCcaTca22B.1.1.3180.000604
ORF1ab/nsp810P10SCcaTca22B.1.1.330.000842
ORF1ab/nsp810P10SCcaTca22B.1.1.340.026316
ORF1ab/nsp810P10SCcaTca22B.1.1.370.000386
ORF1ab/nsp810P10SCcaTca22B.1.1.390.001019
ORF1ab/nsp810P10SCcaTca22B.1.1.4860.003155
ORF1ab/nsp810P10SCcaTca22B.1.1.500.001358
ORF1ab/nsp810P10SCcaTca22B.1.177.320.002699
ORF1ab/nsp810P10SCcaTca22B.1.1890.008584
ORF1ab/nsp810P10SCcaTca22B.1.243.20.028986
ORF1ab/nsp810P10SCcaTca22B.1.2790.001027
ORF1ab/nsp810P10SCcaTca22B.1.2890.005319
ORF1ab/nsp810P10SCcaTca22B.1.3510.000059
ORF1ab/nsp810P10SCcaTca22B.1.36.160.002849
ORF1ab/nsp810P10SCcaTca22B.1.36.180.00084
ORF1ab/nsp810P10SCcaTca22B.1.428.30.025641
ORF1ab/nsp810P10SCcaTca22B.1.4970.00063
ORF1ab/nsp810P10SCcaTca22B.1.5240.002813
ORF1ab/nsp810P10SCcaTca22B.1.5490.014388
ORF1ab/nsp810P10SCcaTca22B.1.6180.008065
ORF1ab/nsp810P10SCcaTca22B.1.6210.000177
ORF1ab/nsp810P10SCcaTca22B.1.9.50.011364
ORF1ab/nsp810P10SCcaTca22P.1.140.000096
ORF1ab/nsp810P10SCcaTca22P.20.000373
ORF1ab/nsp810P10SCcaTca22Q.30.00029
ORF1ab/nsp810P10SCcaTca22Q.80.00033
ORF1ab/nsp810P10SCcaTca11A0.000387
ORF1ab/nsp810P10SCcaTca11A.10.000282
ORF1ab/nsp810P10SCcaTca11AE.10.011364
ORF1ab/nsp810P10SCcaTca11AY.1130.000142
ORF1ab/nsp810P10SCcaTca11AY.120.10.000321
ORF1ab/nsp810P10SCcaTca11AY.160.00038
ORF1ab/nsp810P10SCcaTca11AY.270.000065
ORF1ab/nsp810P10SCcaTca11AY.29.10.000221
ORF1ab/nsp810P10SCcaTca11AY.360.000148
ORF1ab/nsp810P10SCcaTca11AY.370.000316
ORF1ab/nsp810P10SCcaTca11AY.380.000499
ORF1ab/nsp810P10SCcaTca11AY.4.2.10.000149
ORF1ab/nsp810P10SCcaTca11AY.46.30.000934
ORF1ab/nsp810P10SCcaTca11AY.46.40.000165
ORF1ab/nsp810P10SCcaTca11AY.5.40.000277
ORF1ab/nsp810P10SCcaTca11AY.520.000814
ORF1ab/nsp810P10SCcaTca11AY.530.000288
ORF1ab/nsp810P10SCcaTca11AY.570.000656
ORF1ab/nsp810P10SCcaTca11AY.60.000041
ORF1ab/nsp810P10SCcaTca11AY.620.000436
ORF1ab/nsp810P10SCcaTca11AY.680.000274
ORF1ab/nsp810P10SCcaTca11AY.790.001211
ORF1ab/nsp810P10SCcaTca11AY.880.000884
ORF1ab/nsp810P10SCcaTca11AY.910.00073
ORF1ab/nsp810P10SCcaTca11AY.930.000273
ORF1ab/nsp810P10SCcaTca11AY.980.000079
ORF1ab/nsp810P10SCcaTca11B.1.1.100.001115
ORF1ab/nsp810P10SCcaTca11B.1.1.1320.014925
ORF1ab/nsp810P10SCcaTca11B.1.1.1410.002012
ORF1ab/nsp810P10SCcaTca11B.1.1.1630.007634
ORF1ab/nsp810P10SCcaTca11B.1.1.2140.000055
ORF1ab/nsp810P10SCcaTca11B.1.1.2160.00089
ORF1ab/nsp810P10SCcaTca11B.1.1.2170.003636
ORF1ab/nsp810P10SCcaTca11B.1.1.2270.004348
ORF1ab/nsp810P10SCcaTca11B.1.1.3060.000438
ORF1ab/nsp810P10SCcaTca11B.1.1.3690.000446
ORF1ab/nsp810P10SCcaTca11B.1.1.3720.000689
ORF1ab/nsp810P10SCcaTca11B.1.1.4090.002833
ORF1ab/nsp810P10SCcaTca11B.1.1.4120.007634
ORF1ab/nsp810P10SCcaTca11B.1.1.460.004367
ORF1ab/nsp810P10SCcaTca11B.1.1.700.000341
ORF1ab/nsp810P10SCcaTca11B.1.1110.001175
ORF1ab/nsp810P10SCcaTca11B.1.160.180.007299
ORF1ab/nsp810P10SCcaTca11B.1.160.330.004425
ORF1ab/nsp810P10SCcaTca11B.1.1640.014925
ORF1ab/nsp810P10SCcaTca11B.1.177.120.000152
ORF1ab/nsp810P10SCcaTca11B.1.177.40.000211
ORF1ab/nsp810P10SCcaTca11B.1.177.70.000165
ORF1ab/nsp810P10SCcaTca11B.1.177.750.001041
ORF1ab/nsp810P10SCcaTca11B.1.177.850.005435
ORF1ab/nsp810P10SCcaTca11B.1.220.001318
ORF1ab/nsp810P10SCcaTca11B.1.2230.002778
ORF1ab/nsp810P10SCcaTca11B.1.2340.000132
ORF1ab/nsp810P10SCcaTca11B.1.258.110.000396
ORF1ab/nsp810P10SCcaTca11B.1.3110.000275
ORF1ab/nsp810P10SCcaTca11B.1.3240.001605
ORF1ab/nsp810P10SCcaTca11B.1.3320.003497
ORF1ab/nsp810P10SCcaTca11B.1.36.310.001751
ORF1ab/nsp810P10SCcaTca11B.1.36.380.001642
ORF1ab/nsp810P10SCcaTca11B.1.36.80.001
ORF1ab/nsp810P10SCcaTca11B.1.3980.002976
ORF1ab/nsp810P10SCcaTca11B.1.4330.003195
ORF1ab/nsp810P10SCcaTca11B.1.4590.004082
ORF1ab/nsp810P10SCcaTca11B.1.5030.002488
ORF1ab/nsp810P10SCcaTca11B.1.5380.008065
ORF1ab/nsp810P10SCcaTca11B.1.5680.001111
ORF1ab/nsp810P10SCcaTca11B.1.5950.000261
ORF1ab/nsp810P10SCcaTca11B.1.621.10.000506
ORF1ab/nsp810P10SCcaTca11B.1.6250.002353
ORF1ab/nsp810P10SCcaTca11B.1.6370.000073
ORF1ab/nsp810P10SCcaTca11C.10.002392
ORF1ab/nsp810P10SCcaTca11C.140.004329
ORF1ab/nsp810P10SCcaTca11C.170.055556