CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = S25del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp725S25del1S3884del1deltCat-a420.511915-11917
ORF1ab/nsp725S25del1S3884del1deltcAtc-410.2511915-11917
ORF1ab/nsp725S25del1S3884del1delTca-ca410.2511915-11917

Details of the mutation S25del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp725S25del1tCat-a24All0
ORF1ab/nsp725S25del1tcAtc-14All0
ORF1ab/nsp725S25del1Tca-ca14All0
ORF1ab/nsp725S25del1tCat-a22B.1.6270.00404
ORF1ab/nsp725S25del1tcAtc-11AY.4.50.000107
ORF1ab/nsp725S25del1Tca-ca11B.1.20.000009