CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = L76L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp776L76LL3935LsynctGctT19425105970.54553412068-12070
ORF1ab/nsp776L76LL3935LsynCtgTtg1942572060.37096512068-12070
ORF1ab/nsp776L76LL3935LsynctGctA1942515700.080823712068-12070
ORF1ab/nsp776L76LL3935LsynctGctC19425520.0026769612068-12070

Details of the mutation L76L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp776L76LctGctT1059719425All0.002027
ORF1ab/nsp776L76LCtgTtg720619425All0.001378
ORF1ab/nsp776L76LctGctA157019425All0.0003
ORF1ab/nsp776L76LctGctC5219425All0.00001
ORF1ab/nsp776L76LctGctT71308706B.1.1.70.006383
ORF1ab/nsp776L76LCtgTtg14098706B.1.1.70.001261
ORF1ab/nsp776L76LctGctA1478706B.1.1.70.000132
ORF1ab/nsp776L76LctGctC208706B.1.1.70.000018
ORF1ab/nsp776L76LCtgTtg21032140AY.290.033172
ORF1ab/nsp776L76LctGctT342140AY.290.000536
ORF1ab/nsp776L76LctGctA32140AY.290.000047
ORF1ab/nsp776L76LctGctA8401242AY.1030.005216
ORF1ab/nsp776L76LctGctT2041242AY.1030.001267
ORF1ab/nsp776L76LCtgTtg1981242AY.1030.001229
ORF1ab/nsp776L76LCtgTtg568717B.1.20.005001
ORF1ab/nsp776L76LctGctT144717B.1.20.001268
ORF1ab/nsp776L76LctGctA5717B.1.20.000044
ORF1ab/nsp776L76LctGctT527578P.10.008302
ORF1ab/nsp776L76LCtgTtg46578P.10.000725
ORF1ab/nsp776L76LctGctA5578P.10.000079
ORF1ab/nsp776L76LCtgTtg258534AY.40.000402
ORF1ab/nsp776L76LctGctT220534AY.40.000342
ORF1ab/nsp776L76LctGctA55534AY.40.000086
ORF1ab/nsp776L76LctGctC1534AY.40.000002
ORF1ab/nsp776L76LCtgTtg202508B.1.617.20.000761
ORF1ab/nsp776L76LctGctT185508B.1.617.20.000697
ORF1ab/nsp776L76LctGctA117508B.1.617.20.000441
ORF1ab/nsp776L76LctGctC4508B.1.617.20.000015
ORF1ab/nsp776L76LCtgTtg283341B.10.002592
ORF1ab/nsp776L76LctGctT53341B.10.000485
ORF1ab/nsp776L76LctGctA5341B.10.000046
ORF1ab/nsp776L76LctGctA206295AY.30.002049
ORF1ab/nsp776L76LctGctT53295AY.30.000527
ORF1ab/nsp776L76LCtgTtg36295AY.30.000358
ORF1ab/nsp776L76LCtgTtg147204AY.440.000895
ORF1ab/nsp776L76LctGctT55204AY.440.000335
ORF1ab/nsp776L76LctGctA2204AY.440.000012
ORF1ab/nsp776L76LctGctT192200AY.420.007724
ORF1ab/nsp776L76LCtgTtg8200AY.420.000322
ORF1ab/nsp776L76LCtgTtg188195AY.200.007307
ORF1ab/nsp776L76LctGctT4195AY.200.000155
ORF1ab/nsp776L76LctGctA3195AY.200.000117
ORF1ab/nsp776L76LctGctT151162B.1.2580.010049
ORF1ab/nsp776L76LCtgTtg11162B.1.2580.000732
ORF1ab/nsp776L76LctGctT82160AY.430.000363
ORF1ab/nsp776L76LCtgTtg59160AY.430.000261
ORF1ab/nsp776L76LctGctA19160AY.430.000084
ORF1ab/nsp776L76LCtgTtg137139AY.60.005635
ORF1ab/nsp776L76LctGctT2139AY.60.000082
ORF1ab/nsp776L76LctGctT136136B.1.1.500.092329
ORF1ab/nsp776L76LCtgTtg68135AY.250.000409
ORF1ab/nsp776L76LctGctT51135AY.250.000307
ORF1ab/nsp776L76LctGctA16135AY.250.000096
ORF1ab/nsp776L76LctGctT105115B.1.2210.007458
ORF1ab/nsp776L76LCtgTtg10115B.1.2210.00071
ORF1ab/nsp776L76LctGctT106108AY.740.012259
ORF1ab/nsp776L76LCtgTtg2108AY.740.000231
ORF1ab/nsp776L76LCtgTtg9494B.1.5911
ORF1ab/nsp776L76LctGctT4686B.1.10.000834
ORF1ab/nsp776L76LCtgTtg3686B.1.10.000653
ORF1ab/nsp776L76LctGctA386B.1.10.000054
ORF1ab/nsp776L76LctGctC186B.1.10.000018
ORF1ab/nsp776L76LctGctT8283B.1.1.2840.008807
ORF1ab/nsp776L76LCtgTtg183B.1.1.2840.000107
ORF1ab/nsp776L76LCtgTtg7983P.1.150.018355
ORF1ab/nsp776L76LctGctT483P.1.150.000929
ORF1ab/nsp776L76LctGctT7880AY.610.008173
ORF1ab/nsp776L76LCtgTtg280AY.610.00021
ORF1ab/nsp776L76LCtgTtg7980B.1.177.810.014956
ORF1ab/nsp776L76LctGctT180B.1.177.810.000189
ORF1ab/nsp776L76LCtgTtg7477B.1.5880.067334
ORF1ab/nsp776L76LctGctT377B.1.5880.00273
ORF1ab/nsp776L76LctGctT6166P.1.140.002916
ORF1ab/nsp776L76LCtgTtg566P.1.140.000239
ORF1ab/nsp776L76LCtgTtg3462AY.390.00084
ORF1ab/nsp776L76LctGctT2462AY.390.000593
ORF1ab/nsp776L76LctGctA462AY.390.000099
ORF1ab/nsp776L76LctGctT3262B.1.1770.000421
ORF1ab/nsp776L76LCtgTtg2962B.1.1770.000382
ORF1ab/nsp776L76LctGctA162B.1.1770.000013
ORF1ab/nsp776L76LCtgTtg4560B.1.1.2220.00918
ORF1ab/nsp776L76LctGctT1560B.1.1.2220.00306
ORF1ab/nsp776L76LCtgTtg5759B.1.258.170.005926
ORF1ab/nsp776L76LctGctA259B.1.258.170.000208
ORF1ab/nsp776L76LctGctT2956AY.1020.000769
ORF1ab/nsp776L76LCtgTtg2156AY.1020.000557
ORF1ab/nsp776L76LctGctA656AY.1020.000159
ORF1ab/nsp776L76LctGctT3256AY.4.20.000694
ORF1ab/nsp776L76LCtgTtg2156AY.4.20.000455
ORF1ab/nsp776L76LctGctA356AY.4.20.000065
ORF1ab/nsp776L76LctGctT4456B.1.1600.001372
ORF1ab/nsp776L76LCtgTtg756B.1.1600.000218
ORF1ab/nsp776L76LctGctA556B.1.1600.000156
ORF1ab/nsp776L76LctGctT5253AY.4.30.043771
ORF1ab/nsp776L76LCtgTtg153AY.4.30.000842
ORF1ab/nsp776L76LctGctT4253B.1.3510.001249
ORF1ab/nsp776L76LCtgTtg953B.1.3510.000268
ORF1ab/nsp776L76LctGctA253B.1.3510.000059
ORF1ab/nsp776L76LCtgTtg2651B.1.360.003793
ORF1ab/nsp776L76LctGctT2451B.1.360.003502
ORF1ab/nsp776L76LctGctA151B.1.360.000146
ORF1ab/nsp776L76LctGctT4246AY.90.002839
ORF1ab/nsp776L76LCtgTtg346AY.90.000203
ORF1ab/nsp776L76LctGctA146AY.90.000068
ORF1ab/nsp776L76LCtgTtg2644B.1.4290.000612
ORF1ab/nsp776L76LctGctT1144B.1.4290.000259
ORF1ab/nsp776L76LctGctC644B.1.4290.000141
ORF1ab/nsp776L76LctGctA144B.1.4290.000024
ORF1ab/nsp776L76LCtgTtg4444B.1.5500.60274
ORF1ab/nsp776L76LCtgTtg3542AY.460.003643
ORF1ab/nsp776L76LctGctT442AY.460.000416
ORF1ab/nsp776L76LctGctA342AY.460.000312
ORF1ab/nsp776L76LCtgTtg2942B.1.6370.002119
ORF1ab/nsp776L76LctGctT1242B.1.6370.000877
ORF1ab/nsp776L76LctGctA142B.1.6370.000073
ORF1ab/nsp776L76LCtgTtg3241AY.46.60.002311
ORF1ab/nsp776L76LctGctT941AY.46.60.00065
ORF1ab/nsp776L76LCtgTtg1741B.1.1.5190.000675
ORF1ab/nsp776L76LctGctA1641B.1.1.5190.000635
ORF1ab/nsp776L76LctGctT841B.1.1.5190.000318
ORF1ab/nsp776L76LCtgTtg3434AY.9.10.002847
ORF1ab/nsp776L76LctGctT1832B.1.177.860.003302
ORF1ab/nsp776L76LCtgTtg1432B.1.177.860.002568
ORF1ab/nsp776L76LctGctT3030B.1.1.2630.046729
ORF1ab/nsp776L76LCtgTtg1730C.370.001973
ORF1ab/nsp776L76LctGctA730C.370.000812
ORF1ab/nsp776L76LctGctT630C.370.000696
ORF1ab/nsp776L76LCtgTtg2527AY.29.10.005513
ORF1ab/nsp776L76LctGctT227AY.29.10.000441
ORF1ab/nsp776L76LctGctT923AY.260.000255
ORF1ab/nsp776L76LCtgTtg923AY.260.000255
ORF1ab/nsp776L76LctGctA523AY.260.000142
ORF1ab/nsp776L76LCtgTtg2123B.1.5260.000494
ORF1ab/nsp776L76LctGctT223B.1.5260.000047
ORF1ab/nsp776L76LCtgTtg1022AY.1000.00046
ORF1ab/nsp776L76LctGctT822AY.1000.000368
ORF1ab/nsp776L76LctGctA422AY.1000.000184
ORF1ab/nsp776L76LCtgTtg1122AY.1190.000388
ORF1ab/nsp776L76LctGctT622AY.1190.000212
ORF1ab/nsp776L76LctGctA522AY.1190.000177
ORF1ab/nsp776L76LctGctT2222B.1.1570.065672
ORF1ab/nsp776L76LCtgTtg1120AY.50.000227
ORF1ab/nsp776L76LctGctA520AY.50.000103
ORF1ab/nsp776L76LctGctT420AY.50.000083
ORF1ab/nsp776L76LCtgTtg2020B.1.617.10.002579
ORF1ab/nsp776L76LctGctT1819AY.98.10.000872
ORF1ab/nsp776L76LCtgTtg119AY.98.10.000048
ORF1ab/nsp776L76LctGctT1818AY.320.009585
ORF1ab/nsp776L76LctGctT1118B.1.177.820.005251
ORF1ab/nsp776L76LctGctA718B.1.177.820.003341
ORF1ab/nsp776L76LCtgTtg1417AY.34.10.007139
ORF1ab/nsp776L76LctGctT317AY.34.10.00153
ORF1ab/nsp776L76LctGctC1517B.1.1.2910.011136
ORF1ab/nsp776L76LCtgTtg117B.1.1.2910.000742
ORF1ab/nsp776L76LctGctT117B.1.1.2910.000742
ORF1ab/nsp776L76LCtgTtg1717B.1.5810.160377
ORF1ab/nsp776L76LCtgTtg816AY.9.20.000294
ORF1ab/nsp776L76LctGctT816AY.9.20.000294
ORF1ab/nsp776L76LctGctT815AY.1170.000676
ORF1ab/nsp776L76LctGctA415AY.1170.000338
ORF1ab/nsp776L76LCtgTtg315AY.1170.000254
ORF1ab/nsp776L76LctGctT1515AY.330.001002
ORF1ab/nsp776L76LCtgTtg1015AY.470.000311
ORF1ab/nsp776L76LctGctT515AY.470.000156
ORF1ab/nsp776L76LCtgTtg1515B.1.5950.003914
ORF1ab/nsp776L76LCtgTtg1214AY.1200.000446
ORF1ab/nsp776L76LctGctT214AY.1200.000074
ORF1ab/nsp776L76LctGctT1313AD.20.002847
ORF1ab/nsp776L76LCtgTtg713AY.750.000392
ORF1ab/nsp776L76LctGctT613AY.750.000336
ORF1ab/nsp776L76LctGctT612P.20.00112
ORF1ab/nsp776L76LCtgTtg512P.20.000933
ORF1ab/nsp776L76LctGctA112P.20.000187
ORF1ab/nsp776L76LCtgTtg811B0.001022
ORF1ab/nsp776L76LctGctT211B0.000256
ORF1ab/nsp776L76LctGctA111B0.000128
ORF1ab/nsp776L76LCtgTtg1111B.1.1.10.003594
ORF1ab/nsp776L76LctGctT711B.1.1.2940.008861
ORF1ab/nsp776L76LCtgTtg311B.1.1.2940.003797
ORF1ab/nsp776L76LctGctC111B.1.1.2940.001266
ORF1ab/nsp776L76LctGctT511B.1.2340.00066
ORF1ab/nsp776L76LctGctA311B.1.2340.000396
ORF1ab/nsp776L76LCtgTtg311B.1.2340.000396
ORF1ab/nsp776L76LctGctT1010B.1.1.770.416667
ORF1ab/nsp776L76LctGctT1010B.1.2390.01221
ORF1ab/nsp776L76LCtgTtg610B.1.5960.000523
ORF1ab/nsp776L76LctGctT410B.1.5960.000349
ORF1ab/nsp776L76LCtgTtg1010B.1.621.10.005058
ORF1ab/nsp776L76LCtgTtg69AY.450.00073
ORF1ab/nsp776L76LctGctT39AY.450.000365
ORF1ab/nsp776L76LCtgTtg99B.1.36.100.043062
ORF1ab/nsp776L76LctGctT49B.1.5250.000453
ORF1ab/nsp776L76LctGctA39B.1.5250.000339
ORF1ab/nsp776L76LCtgTtg29B.1.5250.000226
ORF1ab/nsp776L76LCtgTtg99B.1.6190.00784
ORF1ab/nsp776L76LCtgTtg99L.10.017143
ORF1ab/nsp776L76LctGctT59Q.80.000825
ORF1ab/nsp776L76LCtgTtg49Q.80.00066
ORF1ab/nsp776L76LCtgTtg78AY.360.001037
ORF1ab/nsp776L76LctGctT18AY.360.000148
ORF1ab/nsp776L76LctGctA68B.1.1.3170.00247
ORF1ab/nsp776L76LctGctT28B.1.1.3170.000823
ORF1ab/nsp776L76LCtgTtg48B.1.2430.000278
ORF1ab/nsp776L76LctGctA28B.1.2430.000139
ORF1ab/nsp776L76LctGctT28B.1.2430.000139
ORF1ab/nsp776L76LCtgTtg57AY.3.10.000426
ORF1ab/nsp776L76LctGctT27AY.3.10.000171
ORF1ab/nsp776L76LCtgTtg77AY.570.004593
ORF1ab/nsp776L76LCtgTtg67B.1.1.4340.002091
ORF1ab/nsp776L76LctGctT17B.1.1.4340.000349
ORF1ab/nsp776L76LCtgTtg77B.1.2360.014374
ORF1ab/nsp776L76LctGctT77P.1.10.002224
ORF1ab/nsp776L76LctGctT57P.1.120.00242
ORF1ab/nsp776L76LCtgTtg27P.1.120.000968
ORF1ab/nsp776L76LCtgTtg57R.10.00045
ORF1ab/nsp776L76LctGctT27R.10.00018
ORF1ab/nsp776L76LctGctA560.277778
ORF1ab/nsp776L76LctGctT160.055556
ORF1ab/nsp776L76LCtgTtg36AY.230.000209
ORF1ab/nsp776L76LctGctT36AY.230.000209
ORF1ab/nsp776L76LctGctT66AY.300.002374
ORF1ab/nsp776L76LctGctT56AY.350.001165
ORF1ab/nsp776L76LCtgTtg16AY.350.000233
ORF1ab/nsp776L76LCtgTtg56AY.4.2.10.000745
ORF1ab/nsp776L76LctGctT16AY.4.2.10.000149
ORF1ab/nsp776L76LctGctT36AY.980.000237
ORF1ab/nsp776L76LctGctA26AY.980.000158
ORF1ab/nsp776L76LCtgTtg16AY.980.000079
ORF1ab/nsp776L76LctGctT46AY.99.20.000369
ORF1ab/nsp776L76LCtgTtg26AY.99.20.000184
ORF1ab/nsp776L76LctGctT56B.1.1.3060.002192
ORF1ab/nsp776L76LCtgTtg16B.1.1.3060.000438
ORF1ab/nsp776L76LCtgTtg66B.1.1.3550.092308
ORF1ab/nsp776L76LctGctT46B.1.36.170.001976
ORF1ab/nsp776L76LCtgTtg26B.1.36.170.000988
ORF1ab/nsp776L76LCtgTtg66B.1.4260.006054
ORF1ab/nsp776L76LCtgTtg56B.1.4270.000252
ORF1ab/nsp776L76LctGctT16B.1.4270.00005
ORF1ab/nsp776L76LCtgTtg66B.1.438.10.000644
ORF1ab/nsp776L76LCtgTtg35AY.1110.000549
ORF1ab/nsp776L76LctGctT25AY.1110.000366
ORF1ab/nsp776L76LctGctT35AY.1160.00086
ORF1ab/nsp776L76LCtgTtg25AY.1160.000574
ORF1ab/nsp776L76LctGctT55AY.120.10.001605
ORF1ab/nsp776L76LctGctA45AY.1210.000541
ORF1ab/nsp776L76LCtgTtg15AY.1210.000135
ORF1ab/nsp776L76LCtgTtg45AY.46.40.000658
ORF1ab/nsp776L76LctGctT15AY.46.40.000165
ORF1ab/nsp776L76LctGctT35AY.540.000286
ORF1ab/nsp776L76LCtgTtg25AY.540.000191
ORF1ab/nsp776L76LctGctT35AY.7.10.000338
ORF1ab/nsp776L76LCtgTtg25AY.7.10.000225
ORF1ab/nsp776L76LctGctT55AY.770.005637
ORF1ab/nsp776L76LctGctT45AY.920.001149
ORF1ab/nsp776L76LCtgTtg15AY.920.000287
ORF1ab/nsp776L76LCtgTtg45B.1.1.2140.000222
ORF1ab/nsp776L76LctGctT15B.1.1.2140.000055
ORF1ab/nsp776L76LCtgTtg35B.1.177.440.001557
ORF1ab/nsp776L76LctGctA25B.1.177.440.001038
ORF1ab/nsp776L76LctGctT55B.1.214.20.002998
ORF1ab/nsp776L76LCtgTtg25B.1.6210.000177
ORF1ab/nsp776L76LctGctT25B.1.6210.000177
ORF1ab/nsp776L76LctGctA15B.1.6210.000089
ORF1ab/nsp776L76LCtgTtg55B.120.032051
ORF1ab/nsp776L76LCtgTtg35P.1.170.000485
ORF1ab/nsp776L76LctGctT25P.1.170.000324
ORF1ab/nsp776L76LCtgTtg34AY.1060.001005
ORF1ab/nsp776L76LctGctT14AY.1060.000335
ORF1ab/nsp776L76LctGctT34AY.1130.000427
ORF1ab/nsp776L76LctGctA14AY.1130.000142
ORF1ab/nsp776L76LctGctT34AY.340.000291
ORF1ab/nsp776L76LCtgTtg14AY.340.000097
ORF1ab/nsp776L76LctGctT34AY.590.001589
ORF1ab/nsp776L76LCtgTtg14AY.590.00053
ORF1ab/nsp776L76LCtgTtg44AY.75.10.000721
ORF1ab/nsp776L76LCtgTtg34AZ.20.002463
ORF1ab/nsp776L76LctGctA14AZ.20.000821
ORF1ab/nsp776L76LCtgTtg44B.1.1.3180.001207
ORF1ab/nsp776L76LCtgTtg44B.1.1.4320.005063
ORF1ab/nsp776L76LctGctA44B.1.177.600.000874
ORF1ab/nsp776L76LCtgTtg44B.1.177.790.009368
ORF1ab/nsp776L76LCtgTtg34B.1.2400.000647
ORF1ab/nsp776L76LctGctT14B.1.2400.000216
ORF1ab/nsp776L76LCtgTtg34B.1.2410.002435
ORF1ab/nsp776L76LctGctT14B.1.2410.000812
ORF1ab/nsp776L76LCtgTtg24B.1.36.80.002
ORF1ab/nsp776L76LctGctT24B.1.36.80.002
ORF1ab/nsp776L76LCtgTtg44B.1.3710.004489
ORF1ab/nsp776L76LctGctT44B.1.6280.001409
ORF1ab/nsp776L76LCtgTtg44N.50.007067
ORF1ab/nsp776L76LCtgTtg33AY.1090.002219
ORF1ab/nsp776L76LctGctA23AY.130.000322
ORF1ab/nsp776L76LCtgTtg13AY.130.000161
ORF1ab/nsp776L76LCtgTtg33AY.270.000194
ORF1ab/nsp776L76LCtgTtg23AY.39.10.000079
ORF1ab/nsp776L76LctGctT13AY.39.10.00004
ORF1ab/nsp776L76LCtgTtg23AY.4.50.000215
ORF1ab/nsp776L76LctGctA13AY.4.50.000107
ORF1ab/nsp776L76LctGctT33AY.670.001393
ORF1ab/nsp776L76LCtgTtg23AY.680.000547
ORF1ab/nsp776L76LctGctT13AY.680.000274
ORF1ab/nsp776L76LctGctT23AY.70.000392
ORF1ab/nsp776L76LCtgTtg13AY.70.000196
ORF1ab/nsp776L76LctGctT23AY.700.000417
ORF1ab/nsp776L76LctGctA13AY.700.000209
ORF1ab/nsp776L76LCtgTtg33B.1.1.1570.00274
ORF1ab/nsp776L76LctGctT23B.1.1.2160.001781
ORF1ab/nsp776L76LCtgTtg13B.1.1.2160.00089
ORF1ab/nsp776L76LCtgTtg33B.1.1.2310.009288
ORF1ab/nsp776L76LCtgTtg33B.1.1.3330.003229
ORF1ab/nsp776L76LctGctT33B.1.1.830.00813
ORF1ab/nsp776L76LctGctT33B.1.1110.003525
ORF1ab/nsp776L76LCtgTtg33B.1.1390.002199
ORF1ab/nsp776L76LctGctT33B.1.177.460.002755
ORF1ab/nsp776L76LCtgTtg23B.1.177.70.00033
ORF1ab/nsp776L76LctGctT13B.1.177.70.000165
ORF1ab/nsp776L76LctGctA33B.1.351.20.000908
ORF1ab/nsp776L76LctGctT33B.1.3690.000856
ORF1ab/nsp776L76LctGctT23B.1.4000.000858
ORF1ab/nsp776L76LCtgTtg13B.1.4000.000429
ORF1ab/nsp776L76LCtgTtg23B.1.4160.002538
ORF1ab/nsp776L76LctGctT13B.1.4160.001269
ORF1ab/nsp776L76LctGctA23B.1.4620.014493
ORF1ab/nsp776L76LctGctT13B.1.4620.007246
ORF1ab/nsp776L76LCtgTtg23B.1.466.20.000782
ORF1ab/nsp776L76LctGctT13B.1.466.20.000391
ORF1ab/nsp776L76LCtgTtg33B.1.5200.065217
ORF1ab/nsp776L76LctGctA23B.1.6230.001073
ORF1ab/nsp776L76LCtgTtg13B.1.6230.000536
ORF1ab/nsp776L76LCtgTtg33B.400.001093
ORF1ab/nsp776L76LCtgTtg23D.20.00015
ORF1ab/nsp776L76LctGctC13D.20.000075
ORF1ab/nsp776L76LctGctT33P.1.100.000808
ORF1ab/nsp776L76LCtgTtg23Q.10.000253
ORF1ab/nsp776L76LctGctA13Q.10.000126
ORF1ab/nsp776L76LctGctT22A0.000774
ORF1ab/nsp776L76LCtgTtg12AY.1010.00049
ORF1ab/nsp776L76LctGctA12AY.1010.00049
ORF1ab/nsp776L76LCtgTtg12AY.140.000088
ORF1ab/nsp776L76LctGctT12AY.140.000088
ORF1ab/nsp776L76LctGctT22AY.160.000759
ORF1ab/nsp776L76LctGctT22AY.16.10.00094
ORF1ab/nsp776L76LCtgTtg22AY.5.40.000553
ORF1ab/nsp776L76LCtgTtg22AY.520.001629
ORF1ab/nsp776L76LCtgTtg22AY.620.000871
ORF1ab/nsp776L76LctGctT22AY.630.000774
ORF1ab/nsp776L76LctGctT22AY.690.000373
ORF1ab/nsp776L76LCtgTtg12AY.710.000475
ORF1ab/nsp776L76LctGctT12AY.710.000475
ORF1ab/nsp776L76LctGctA22AY.790.002421
ORF1ab/nsp776L76LCtgTtg12AY.840.000437
ORF1ab/nsp776L76LctGctT12AY.840.000437
ORF1ab/nsp776L76LCtgTtg22AY.850.000854
ORF1ab/nsp776L76LctGctT22B.1.1.1590.009346
ORF1ab/nsp776L76LctGctT22B.1.1.1700.002494
ORF1ab/nsp776L76LctGctT22B.1.1.2360.013793
ORF1ab/nsp776L76LctGctT22B.1.1.250.001137
ORF1ab/nsp776L76LctGctT22B.1.1.3110.000716
ORF1ab/nsp776L76LCtgTtg12B.1.1.330.000421
ORF1ab/nsp776L76LctGctT12B.1.1.330.000421
ORF1ab/nsp776L76LCtgTtg22B.1.1.3720.001377
ORF1ab/nsp776L76LCtgTtg22B.1.1.3890.012121
ORF1ab/nsp776L76LctGctT12B.1.1.390.00051
ORF1ab/nsp776L76LCtgTtg12B.1.1.390.00051
ORF1ab/nsp776L76LCtgTtg12B.1.1.3980.003226
ORF1ab/nsp776L76LctGctT12B.1.1.3980.003226
ORF1ab/nsp776L76LCtgTtg22B.1.1.4480.004065
ORF1ab/nsp776L76LCtgTtg22B.1.1.520.02439
ORF1ab/nsp776L76LCtgTtg22B.1.1120.010363
ORF1ab/nsp776L76LctGctT22B.1.1260.002551
ORF1ab/nsp776L76LctGctC22B.1.160.170.003401
ORF1ab/nsp776L76LCtgTtg22B.1.177.200.003035
ORF1ab/nsp776L76LctGctT22B.1.177.320.002699
ORF1ab/nsp776L76LctGctT22B.1.177.520.003515
ORF1ab/nsp776L76LctGctT22B.1.177.740.030303
ORF1ab/nsp776L76LCtgTtg22B.1.177.870.001456
ORF1ab/nsp776L76LCtgTtg22B.1.2190.018868
ORF1ab/nsp776L76LctGctT22B.1.2230.005556
ORF1ab/nsp776L76LctGctT12B.1.2320.000537
ORF1ab/nsp776L76LCtgTtg12B.1.2320.000537
ORF1ab/nsp776L76LCtgTtg22B.1.2370.00995
ORF1ab/nsp776L76LCtgTtg22B.1.2650.002541
ORF1ab/nsp776L76LCtgTtg22B.1.2700.011236
ORF1ab/nsp776L76LCtgTtg12B.1.3110.000275
ORF1ab/nsp776L76LctGctA12B.1.3110.000275
ORF1ab/nsp776L76LctGctT22B.1.3200.002491
ORF1ab/nsp776L76LCtgTtg22B.1.3420.2
ORF1ab/nsp776L76LctGctT22B.1.36.10.002281
ORF1ab/nsp776L76LCtgTtg22B.1.36.160.002849
ORF1ab/nsp776L76LCtgTtg12B.1.4560.003268
ORF1ab/nsp776L76LctGctT12B.1.4560.003268
ORF1ab/nsp776L76LctGctT12B.1.4590.004082
ORF1ab/nsp776L76LCtgTtg12B.1.4590.004082
ORF1ab/nsp776L76LCtgTtg22B.1.5030.004975
ORF1ab/nsp776L76LCtgTtg22B.1.5170.000854
ORF1ab/nsp776L76LCtgTtg22B.1.5240.002813
ORF1ab/nsp776L76LctGctT22B.1.5700.005882
ORF1ab/nsp776L76LCtgTtg22B.1.5750.000607
ORF1ab/nsp776L76LctGctT22B.1.6260.011429
ORF1ab/nsp776L76LctGctT22B.1.9.50.011364
ORF1ab/nsp776L76LCtgTtg22C.230.011628
ORF1ab/nsp776L76LctGctT22C.36.30.001134
ORF1ab/nsp776L76LctGctA12C.37.10.002618
ORF1ab/nsp776L76LctGctT12C.37.10.002618
ORF1ab/nsp776L76LCtgTtg12P.1.160.000374
ORF1ab/nsp776L76LctGctT12P.1.160.000374
ORF1ab/nsp776L76LCtgTtg22P.1.70.000639
ORF1ab/nsp776L76LCtgTtg22V.10.045455
ORF1ab/nsp776L76LctGctT11A.10.000282
ORF1ab/nsp776L76LctGctT11A.20.000662
ORF1ab/nsp776L76LCtgTtg11A.2.50.000499
ORF1ab/nsp776L76LctGctT11AF.10.037037
ORF1ab/nsp776L76LctGctT11AV.10.005051
ORF1ab/nsp776L76LctGctA11AY.1180.000063
ORF1ab/nsp776L76LctGctT11AY.120.2.10.000498
ORF1ab/nsp776L76LCtgTtg11AY.170.008197
ORF1ab/nsp776L76LctGctT11AY.190.00114
ORF1ab/nsp776L76LCtgTtg11AY.210.001898
ORF1ab/nsp776L76LctGctT11AY.240.000431
ORF1ab/nsp776L76LCtgTtg11AY.46.10.001027
ORF1ab/nsp776L76LCtgTtg11AY.46.20.000635
ORF1ab/nsp776L76LCtgTtg11AY.5.30.000337
ORF1ab/nsp776L76LCtgTtg11AY.510.000909
ORF1ab/nsp776L76LctGctA11AY.530.000288
ORF1ab/nsp776L76LCtgTtg11AY.550.000917
ORF1ab/nsp776L76LCtgTtg11AY.560.001605
ORF1ab/nsp776L76LCtgTtg11AY.580.000907
ORF1ab/nsp776L76LctGctT11AY.650.000533
ORF1ab/nsp776L76LCtgTtg11AY.660.00107
ORF1ab/nsp776L76LCtgTtg11AY.7.20.000559
ORF1ab/nsp776L76LctGctT11AY.780.001541
ORF1ab/nsp776L76LCtgTtg11AY.870.000833
ORF1ab/nsp776L76LCtgTtg11AY.9.2.10.001976
ORF1ab/nsp776L76LctGctT11AY.910.00073
ORF1ab/nsp776L76LCtgTtg11AY.990.001049
ORF1ab/nsp776L76LctGctT11B.1.1.1170.009709
ORF1ab/nsp776L76LctGctT11B.1.1.1210.002427
ORF1ab/nsp776L76LctGctA11B.1.1.1740.003378
ORF1ab/nsp776L76LCtgTtg11B.1.1.1920.002309
ORF1ab/nsp776L76LCtgTtg11B.1.1.2070.001182
ORF1ab/nsp776L76LCtgTtg11B.1.1.2510.007937
ORF1ab/nsp776L76LctGctT11B.1.1.2620.015152
ORF1ab/nsp776L76LctGctT11B.1.1.2770.000759
ORF1ab/nsp776L76LctGctT11B.1.1.280.000311
ORF1ab/nsp776L76LctGctT11B.1.1.2860.002899
ORF1ab/nsp776L76LctGctA11B.1.1.2980.000862
ORF1ab/nsp776L76LctGctT11B.1.1.3050.003861
ORF1ab/nsp776L76LctGctT11B.1.1.3090.005848
ORF1ab/nsp776L76LCtgTtg11B.1.1.3160.000925
ORF1ab/nsp776L76LctGctT11B.1.1.3220.008772
ORF1ab/nsp776L76LCtgTtg11B.1.1.3480.000796
ORF1ab/nsp776L76LctGctA11B.1.1.3540.004386
ORF1ab/nsp776L76LCtgTtg11B.1.1.3690.000446
ORF1ab/nsp776L76LctGctT11B.1.1.370.000193
ORF1ab/nsp776L76LctGctT11B.1.1.4280.009434
ORF1ab/nsp776L76LCtgTtg11B.1.1.460.004367
ORF1ab/nsp776L76LctGctT11B.1.1.4860.001577
ORF1ab/nsp776L76LctGctT11B.1.1.5000.02
ORF1ab/nsp776L76LctGctT11B.1.1.5260.003546
ORF1ab/nsp776L76LctGctC11B.1.1.630.000386
ORF1ab/nsp776L76LCtgTtg11B.1.1.700.000341
ORF1ab/nsp776L76LctGctT11B.1.1.710.006061
ORF1ab/nsp776L76LCtgTtg11B.1.1.980.018519
ORF1ab/nsp776L76LCtgTtg11B.1.110.30.000718
ORF1ab/nsp776L76LCtgTtg11B.1.1590.012195
ORF1ab/nsp776L76LCtgTtg11B.1.177.110.001698
ORF1ab/nsp776L76LctGctA11B.1.177.150.000631
ORF1ab/nsp776L76LctGctT11B.1.177.170.000821
ORF1ab/nsp776L76LCtgTtg11B.1.177.210.000076
ORF1ab/nsp776L76LCtgTtg11B.1.177.330.001645
ORF1ab/nsp776L76LCtgTtg11B.1.177.550.002331
ORF1ab/nsp776L76LCtgTtg11B.1.177.580.001332
ORF1ab/nsp776L76LCtgTtg11B.1.177.730.000566
ORF1ab/nsp776L76LctGctT11B.1.177.800.001912
ORF1ab/nsp776L76LCtgTtg11B.1.177.850.005435
ORF1ab/nsp776L76LctGctT11B.1.2100.002132
ORF1ab/nsp776L76LCtgTtg11B.1.2140.003663
ORF1ab/nsp776L76LctGctT11B.1.214.10.02
ORF1ab/nsp776L76LctGctT11B.1.220.001318
ORF1ab/nsp776L76LctGctT11B.1.258.210.007752
ORF1ab/nsp776L76LCtgTtg11B.1.2600.003344
ORF1ab/nsp776L76LCtgTtg11B.1.2640.012346
ORF1ab/nsp776L76LCtgTtg11B.1.2790.000514
ORF1ab/nsp776L76LCtgTtg11B.1.2800.007143
ORF1ab/nsp776L76LCtgTtg11B.1.3020.013333
ORF1ab/nsp776L76LCtgTtg11B.1.3490.000715
ORF1ab/nsp776L76LCtgTtg11B.1.36.180.00042
ORF1ab/nsp776L76LCtgTtg11B.1.36.240.006173
ORF1ab/nsp776L76LCtgTtg11B.1.36.260.002857
ORF1ab/nsp776L76LctGctT11B.1.36.290.000517
ORF1ab/nsp776L76LctGctT11B.1.36.90.003215
ORF1ab/nsp776L76LCtgTtg11B.1.3610.001289
ORF1ab/nsp776L76LCtgTtg11B.1.3620.001541
ORF1ab/nsp776L76LCtgTtg11B.1.3660.004878
ORF1ab/nsp776L76LCtgTtg11B.1.370.014706
ORF1ab/nsp776L76LCtgTtg11B.1.3950.007042
ORF1ab/nsp776L76LCtgTtg11B.1.3960.000706
ORF1ab/nsp776L76LCtgTtg11B.1.4060.006061
ORF1ab/nsp776L76LCtgTtg11B.1.416.10.001563
ORF1ab/nsp776L76LCtgTtg11B.1.4530.003236
ORF1ab/nsp776L76LCtgTtg11B.1.4930.025641
ORF1ab/nsp776L76LCtgTtg11B.1.4990.00105
ORF1ab/nsp776L76LCtgTtg11B.1.499.10.111111
ORF1ab/nsp776L76LctGctT11B.1.5230.002451
ORF1ab/nsp776L76LCtgTtg11B.1.5640.000426
ORF1ab/nsp776L76LCtgTtg11B.1.5670.003333
ORF1ab/nsp776L76LCtgTtg11B.1.5820.000491
ORF1ab/nsp776L76LctGctT11B.1.595.30.026316
ORF1ab/nsp776L76LctGctT11B.1.596.10.009346
ORF1ab/nsp776L76LctGctT11B.1.5970.00463
ORF1ab/nsp776L76LCtgTtg11B.1.60.017241
ORF1ab/nsp776L76LctGctT11B.1.6090.000479
ORF1ab/nsp776L76LCtgTtg11B.1.6310.003367
ORF1ab/nsp776L76LctGctT11B.3.10.001658
ORF1ab/nsp776L76LctGctT11B.4.70.010101
ORF1ab/nsp776L76LCtgTtg11C.160.00106
ORF1ab/nsp776L76LCtgTtg11C.30.10.006711
ORF1ab/nsp776L76LctGctT11C.350.000774
ORF1ab/nsp776L76LCtgTtg11L.30.003546
ORF1ab/nsp776L76LctGctA11N.30.005814
ORF1ab/nsp776L76LctGctT11P.1.20.001156
ORF1ab/nsp776L76LctGctT11Q.30.000145
ORF1ab/nsp776L76LCtgTtg11S.10.00495
ORF1ab/nsp776L76LctGctA11W.40.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.