CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = L71P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp771L71PL3930PnonsyncTtcCt28270.96428612053-12055
ORF1ab/nsp771L71PL3930PnonsyncTTcCC2810.035714312053-12055

Details of the mutation L71P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp771L71PcTtcCt2728All0.000005
ORF1ab/nsp771L71PcTTcCC128All0
ORF1ab/nsp771L71PcTtcCt45B.1.1.70.000004
ORF1ab/nsp771L71PcTTcCC15B.1.1.70.000001
ORF1ab/nsp771L71PcTtcCt44B.10.000037
ORF1ab/nsp771L71PcTtcCt22AY.250.000012
ORF1ab/nsp771L71PcTtcCt22B.1.10.000036
ORF1ab/nsp771L71PcTtcCt110.055556
ORF1ab/nsp771L71PcTtcCt11AY.1020.000027
ORF1ab/nsp771L71PcTtcCt11AY.130.000161
ORF1ab/nsp771L71PcTtcCt11AY.140.000088
ORF1ab/nsp771L71PcTtcCt11AY.30.00001
ORF1ab/nsp771L71PcTtcCt11AY.40.000002
ORF1ab/nsp771L71PcTtcCt11AY.440.000006
ORF1ab/nsp771L71PcTtcCt11AY.450.000122
ORF1ab/nsp771L71PcTtcCt11B.1.1770.000013
ORF1ab/nsp771L71PcTtcCt11B.1.3110.000275
ORF1ab/nsp771L71PcTtcCt11B.1.36.10.00114
ORF1ab/nsp771L71PcTtcCt11B.1.3960.000706
ORF1ab/nsp771L71PcTtcCt11B.1.438.10.000107
ORF1ab/nsp771L71PcTtcCt11B.1.5820.000491
ORF1ab/nsp771L71PcTtcCt11B.1.617.10.000129