CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = L71F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp771L71FL3930FnonsynCttTtt15431154260.99967612053-12055
ORF1ab/nsp771L71FL3930FnonsynCtTTtC1543150.00032402312053-12055

Details of the mutation L71F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp771L71FCttTtt1542615431All0.00295
ORF1ab/nsp771L71FCtTTtC515431All0.000001
ORF1ab/nsp771L71FCttTtt53275327P.20.994214
ORF1ab/nsp771L71FCttTtt21582158B.1.1.280.671646
ORF1ab/nsp771L71FCttTtt20072007AY.40.003124
ORF1ab/nsp771L71FCttTtt621621P.30.990431
ORF1ab/nsp771L71FCttTtt518518AY.390.012801
ORF1ab/nsp771L71FCttTtt427427B.1.20.00376
ORF1ab/nsp771L71FCttTtt318318P.61
ORF1ab/nsp771L71FCttTtt314314B.1.617.20.001182
ORF1ab/nsp771L71FCttTtt223223P.70.973799
ORF1ab/nsp771L71FCttTtt222222B.1.1.70.000199
ORF1ab/nsp771L71FCttTtt187187AY.46.40.030762
ORF1ab/nsp771L71FCttTtt185185B.10.001695
ORF1ab/nsp771L71FCttTtt177177B.1.5760.160471
ORF1ab/nsp771L71FCttTtt175175B.1.4290.004118
ORF1ab/nsp771L71FCttTtt153153B.1.617.10.019732
ORF1ab/nsp771L71FCttTtt150150AY.420.006035
ORF1ab/nsp771L71FCttTtt128128AY.250.00077
ORF1ab/nsp771L71FCttTtt125125AY.30.001243
ORF1ab/nsp771L71FCttTtt123123AY.4.20.002668
ORF1ab/nsp771L71FCttTtt115116B.1.10.002086
ORF1ab/nsp771L71FCtTTtC1116B.1.10.000018
ORF1ab/nsp771L71FCttTtt112112B.1.2430.007793
ORF1ab/nsp771L71FCttTtt105105AY.290.001656
ORF1ab/nsp771L71FCttTtt9898AY.430.000434
ORF1ab/nsp771L71FCttTtt8383B.1.1770.001093
ORF1ab/nsp771L71FCttTtt7575B.1.3630.974026
ORF1ab/nsp771L71FCttTtt6666B.1.1.120.492537
ORF1ab/nsp771L71FCttTtt4747AY.1030.000292
ORF1ab/nsp771L71FCttTtt4747B.1.1600.001466
ORF1ab/nsp771L71FCttTtt4141AY.1000.001886
ORF1ab/nsp771L71FCttTtt3838B.1.2400.008191
ORF1ab/nsp771L71FCttTtt3535AY.440.000213
ORF1ab/nsp771L71FCttTtt3232B.1.1.2220.006528
ORF1ab/nsp771L71FCttTtt3131AY.610.003248
ORF1ab/nsp771L71FCttTtt3131AY.70.006076
ORF1ab/nsp771L71FCttTtt3131B.1.1.3320.96875
ORF1ab/nsp771L71FCttTtt2828AY.1190.000989
ORF1ab/nsp771L71FCttTtt2727B.1.3770.123288
ORF1ab/nsp771L71FCttTtt2626B.1.4000.011154
ORF1ab/nsp771L71FCttTtt2525AY.1020.000663
ORF1ab/nsp771L71FCttTtt2424AY.260.000679
ORF1ab/nsp771L71FCttTtt2323AY.200.000894
ORF1ab/nsp771L71FCttTtt2323B.1.2210.001634
ORF1ab/nsp771L71FCttTtt2121AY.330.001402
ORF1ab/nsp771L71FCttTtt1919B.1.1.5190.000755
ORF1ab/nsp771L71FCttTtt1818B.1.2410.01461
ORF1ab/nsp771L71FCttTtt1717B.1.1.2840.001826
ORF1ab/nsp771L71FCttTtt1717B.1.4060.10303
ORF1ab/nsp771L71FCttTtt1717B.1.5260.0004
ORF1ab/nsp771L71FCttTtt1717B.1.5750.005158
ORF1ab/nsp771L71FCttTtt1616B.1.2980.033827
ORF1ab/nsp771L71FCttTtt1515AY.1210.00203
ORF1ab/nsp771L71FCttTtt1515AY.46.20.00953
ORF1ab/nsp771L71FCttTtt1515AY.90.001014
ORF1ab/nsp771L71FCttTtt1515P.10.000236
ORF1ab/nsp771L71FCttTtt1414AY.98.10.000678
ORF1ab/nsp771L71FCttTtt1313B.1.1.4130.089655
ORF1ab/nsp771L71FCttTtt1313B.1.360.001897
ORF1ab/nsp771L71FCttTtt1313B.1.4710.035519
ORF1ab/nsp771L71FCttTtt1313B.1.6210.001151
ORF1ab/nsp771L71FCttTtt1212B.1.1.2770.009105
ORF1ab/nsp771L71FCttTtt1212B.1.1.4320.01519
ORF1ab/nsp771L71FCttTtt1212B.1.6090.005753
ORF1ab/nsp771L71FCttTtt1010B.100.082645
ORF1ab/nsp771L71FCttTtt99AY.130.001449
ORF1ab/nsp771L71FCttTtt99AY.50.000186
ORF1ab/nsp771L71FCttTtt99B.1.36.360.005418
ORF1ab/nsp771L71FCttTtt99B.1.4270.000454
ORF1ab/nsp771L71FCttTtt88AY.230.000558
ORF1ab/nsp771L71FCttTtt88B.1.5960.000697
ORF1ab/nsp771L71FCttTtt77AY.750.000392
ORF1ab/nsp771L71FCttTtt77B0.000895
ORF1ab/nsp771L71FCttTtt77B.1.3960.00494
ORF1ab/nsp771L71FCttTtt77C.370.000812
ORF1ab/nsp771L71FCttTtt66AY.1040.011905
ORF1ab/nsp771L71FCttTtt66AY.540.000572
ORF1ab/nsp771L71FCttTtt66B.1.1.4090.016997
ORF1ab/nsp771L71FCttTtt66B.1.2580.000399
ORF1ab/nsp771L71FCttTtt66P.50.082192
ORF1ab/nsp771L71FCttTtt55AY.120.10.001605
ORF1ab/nsp771L71FCttTtt55AY.460.00052
ORF1ab/nsp771L71FCttTtt55B.1.1.3110.001791
ORF1ab/nsp771L71FCttTtt55B.1.3510.000149
ORF1ab/nsp771L71FCttTtt55B.1.4990.005252
ORF1ab/nsp771L71FCttTtt55C.360.004554
ORF1ab/nsp771L71FCttTtt55P.1.10.001588
ORF1ab/nsp771L71FCtTTtC440.222222
ORF1ab/nsp771L71FCttTtt44AY.1180.000251
ORF1ab/nsp771L71FCttTtt44AY.3.10.000341
ORF1ab/nsp771L71FCttTtt44AY.39.10.000158
ORF1ab/nsp771L71FCttTtt44AY.710.0019
ORF1ab/nsp771L71FCttTtt44AY.920.001149
ORF1ab/nsp771L71FCttTtt44B.1.1.2610.034483
ORF1ab/nsp771L71FCttTtt44B.1.2340.000528
ORF1ab/nsp771L71FCttTtt44R.10.00036
ORF1ab/nsp771L71FCttTtt33AU.20.007264
ORF1ab/nsp771L71FCttTtt33AY.1130.000427
ORF1ab/nsp771L71FCttTtt33AY.1170.000254
ORF1ab/nsp771L71FCttTtt33AY.300.001187
ORF1ab/nsp771L71FCttTtt33AY.470.000093
ORF1ab/nsp771L71FCttTtt33AY.60.000123
ORF1ab/nsp771L71FCttTtt33AY.620.001307
ORF1ab/nsp771L71FCttTtt33B.1.1.330.001263
ORF1ab/nsp771L71FCttTtt33B.1.1.3760.017857
ORF1ab/nsp771L71FCttTtt33B.1.110.30.002155
ORF1ab/nsp771L71FCttTtt33B.1.177.810.000568
ORF1ab/nsp771L71FCttTtt33B.1.36.100.014354
ORF1ab/nsp771L71FCttTtt33B.1.36.170.001482
ORF1ab/nsp771L71FCttTtt33B.1.36.290.001552
ORF1ab/nsp771L71FCttTtt33B.1.3620.004622
ORF1ab/nsp771L71FCttTtt33B.1.5250.000339
ORF1ab/nsp771L71FCttTtt33P.1.170.000485
ORF1ab/nsp771L71FCttTtt33Q.10.000379
ORF1ab/nsp771L71FCttTtt33Q.80.000495
ORF1ab/nsp771L71FCttTtt22A.2.50.000998
ORF1ab/nsp771L71FCttTtt22AY.10.000791
ORF1ab/nsp771L71FCttTtt22AY.1050.001286
ORF1ab/nsp771L71FCttTtt22AY.1200.000074
ORF1ab/nsp771L71FCttTtt22AY.120.20.002571
ORF1ab/nsp771L71FCttTtt22AY.16.10.00094
ORF1ab/nsp771L71FCttTtt22AY.360.000296
ORF1ab/nsp771L71FCttTtt22AY.5.30.000675
ORF1ab/nsp771L71FCttTtt22AY.850.000854
ORF1ab/nsp771L71FCttTtt22AY.99.20.000184
ORF1ab/nsp771L71FCttTtt22B.1.1.10.000653
ORF1ab/nsp771L71FCttTtt22B.1.1.2200.003717
ORF1ab/nsp771L71FCttTtt22B.1.1.2630.003115
ORF1ab/nsp771L71FCttTtt22B.1.1.3060.000877
ORF1ab/nsp771L71FCttTtt22B.1.1.3180.000604
ORF1ab/nsp771L71FCttTtt22B.1.1.4640.002946
ORF1ab/nsp771L71FCttTtt22B.1.1.5280.009615
ORF1ab/nsp771L71FCttTtt22B.1.1570.00597
ORF1ab/nsp771L71FCttTtt22B.1.177.210.000153
ORF1ab/nsp771L71FCttTtt22B.1.177.600.000437
ORF1ab/nsp771L71FCttTtt22B.1.177.870.001456
ORF1ab/nsp771L71FCttTtt22B.1.3110.000549
ORF1ab/nsp771L71FCttTtt22B.1.36.190.018519
ORF1ab/nsp771L71FCttTtt22B.1.3690.00057
ORF1ab/nsp771L71FCttTtt22B.1.4560.006536
ORF1ab/nsp771L71FCttTtt22B.1.5510.002581
ORF1ab/nsp771L71FCttTtt22B.1.5970.009259
ORF1ab/nsp771L71FCttTtt22B.1.6020.013072
ORF1ab/nsp771L71FCttTtt22C.320.046512
ORF1ab/nsp771L71FCttTtt22C.350.001548
ORF1ab/nsp771L71FCttTtt22D.20.00015
ORF1ab/nsp771L71FCttTtt22L.30.007092
ORF1ab/nsp771L71FCttTtt22P.1.90.009615
ORF1ab/nsp771L71FCttTtt11A.20.000662
ORF1ab/nsp771L71FCttTtt11A.2.20.001689
ORF1ab/nsp771L71FCttTtt11AD.10.004115
ORF1ab/nsp771L71FCttTtt11AD.20.000219
ORF1ab/nsp771L71FCttTtt11AY.1010.00049
ORF1ab/nsp771L71FCttTtt11AY.1080.001103
ORF1ab/nsp771L71FCttTtt11AY.1090.00074
ORF1ab/nsp771L71FCttTtt11AY.1100.000113
ORF1ab/nsp771L71FCttTtt11AY.1140.000231
ORF1ab/nsp771L71FCttTtt11AY.120.2.10.000498
ORF1ab/nsp771L71FCttTtt11AY.160.00038
ORF1ab/nsp771L71FCttTtt11AY.180.010101
ORF1ab/nsp771L71FCttTtt11AY.190.00114
ORF1ab/nsp771L71FCttTtt11AY.270.000065
ORF1ab/nsp771L71FCttTtt11AY.29.10.000221
ORF1ab/nsp771L71FCttTtt11AY.340.000097
ORF1ab/nsp771L71FCttTtt11AY.34.10.00051
ORF1ab/nsp771L71FCttTtt11AY.4.50.000107
ORF1ab/nsp771L71FCttTtt11AY.450.000122
ORF1ab/nsp771L71FCttTtt11AY.490.003195
ORF1ab/nsp771L71FCttTtt11AY.5.40.000277
ORF1ab/nsp771L71FCttTtt11AY.520.000814
ORF1ab/nsp771L71FCttTtt11AY.560.001605
ORF1ab/nsp771L71FCttTtt11AY.630.000387
ORF1ab/nsp771L71FCttTtt11AY.670.000464
ORF1ab/nsp771L71FCttTtt11AY.7.20.000559
ORF1ab/nsp771L71FCttTtt11AY.75.10.00018
ORF1ab/nsp771L71FCttTtt11AY.790.001211
ORF1ab/nsp771L71FCttTtt11AY.9.10.000084
ORF1ab/nsp771L71FCttTtt11AY.9.20.000037
ORF1ab/nsp771L71FCttTtt11AY.940.000443
ORF1ab/nsp771L71FCttTtt11AZ.20.000821
ORF1ab/nsp771L71FCttTtt11B.1.1.1220.045455
ORF1ab/nsp771L71FCttTtt11B.1.1.1280.007092
ORF1ab/nsp771L71FCttTtt11B.1.1.1610.003534
ORF1ab/nsp771L71FCttTtt11B.1.1.1700.001247
ORF1ab/nsp771L71FCttTtt11B.1.1.1980.001468
ORF1ab/nsp771L71FCttTtt11B.1.1.2080.012195
ORF1ab/nsp771L71FCttTtt11B.1.1.2160.00089
ORF1ab/nsp771L71FCttTtt11B.1.1.2690.001353
ORF1ab/nsp771L71FCttTtt11B.1.1.2990.012195
ORF1ab/nsp771L71FCttTtt11B.1.1.3170.000412
ORF1ab/nsp771L71FCttTtt11B.1.1.3620.005618
ORF1ab/nsp771L71FCttTtt11B.1.1.370.000193
ORF1ab/nsp771L71FCttTtt11B.1.1.3710.010417
ORF1ab/nsp771L71FCttTtt11B.1.1.4340.000349
ORF1ab/nsp771L71FCttTtt11B.1.1.440.00241
ORF1ab/nsp771L71FCttTtt11B.1.1.4480.002033
ORF1ab/nsp771L71FCttTtt11B.1.1.4630.0625
ORF1ab/nsp771L71FCttTtt11B.1.1.5230.001563
ORF1ab/nsp771L71FCttTtt11B.1.1.5240.020833
ORF1ab/nsp771L71FCttTtt11B.1.1.630.000386
ORF1ab/nsp771L71FCttTtt11B.1.1.980.018519
ORF1ab/nsp771L71FCttTtt11B.1.1110.001175
ORF1ab/nsp771L71FCttTtt11B.1.1460.004237
ORF1ab/nsp771L71FCttTtt11B.1.1510.011111
ORF1ab/nsp771L71FCttTtt11B.1.1610.017241
ORF1ab/nsp771L71FCttTtt11B.1.177.190.001431
ORF1ab/nsp771L71FCttTtt11B.1.177.40.000211
ORF1ab/nsp771L71FCttTtt11B.1.177.520.001757
ORF1ab/nsp771L71FCttTtt11B.1.177.550.002331
ORF1ab/nsp771L71FCttTtt11B.1.177.570.000281
ORF1ab/nsp771L71FCttTtt11B.1.177.730.000566
ORF1ab/nsp771L71FCttTtt11B.1.1920.009259
ORF1ab/nsp771L71FCttTtt11B.1.2140.003663
ORF1ab/nsp771L71FCttTtt11B.1.214.20.0006
ORF1ab/nsp771L71FCttTtt11B.1.230.006061
ORF1ab/nsp771L71FCttTtt11B.1.2320.000537
ORF1ab/nsp771L71FCttTtt11B.1.258.110.000396
ORF1ab/nsp771L71FCttTtt11B.1.258.170.000104
ORF1ab/nsp771L71FCttTtt11B.1.2650.001271
ORF1ab/nsp771L71FCttTtt11B.1.3200.001245
ORF1ab/nsp771L71FCttTtt11B.1.3240.001605
ORF1ab/nsp771L71FCttTtt11B.1.3410.022727
ORF1ab/nsp771L71FCttTtt11B.1.3560.001727
ORF1ab/nsp771L71FCttTtt11B.1.36.180.00042
ORF1ab/nsp771L71FCttTtt11B.1.36.260.002857
ORF1ab/nsp771L71FCttTtt11B.1.36.390.002217
ORF1ab/nsp771L71FCttTtt11B.1.36.80.001
ORF1ab/nsp771L71FCttTtt11B.1.3750.00082
ORF1ab/nsp771L71FCttTtt11B.1.4070.035714
ORF1ab/nsp771L71FCttTtt11B.1.4160.001269
ORF1ab/nsp771L71FCttTtt11B.1.4280.00102
ORF1ab/nsp771L71FCttTtt11B.1.438.10.000107
ORF1ab/nsp771L71FCttTtt11B.1.4740.001901
ORF1ab/nsp771L71FCttTtt11B.1.499.10.111111
ORF1ab/nsp771L71FCttTtt11B.1.5090.000866
ORF1ab/nsp771L71FCttTtt11B.1.5400.009709
ORF1ab/nsp771L71FCttTtt11B.1.5440.006024
ORF1ab/nsp771L71FCttTtt11B.1.5450.014493
ORF1ab/nsp771L71FCttTtt11B.1.5770.000687
ORF1ab/nsp771L71FCttTtt11B.1.5820.000491
ORF1ab/nsp771L71FCttTtt11B.1.5950.000261
ORF1ab/nsp771L71FCttTtt11B.1.595.10.005848
ORF1ab/nsp771L71FCttTtt11B.1.6180.004032
ORF1ab/nsp771L71FCttTtt11B.1.6200.000946
ORF1ab/nsp771L71FCttTtt11B.1.621.10.000506
ORF1ab/nsp771L71FCttTtt11B.1.6230.000536
ORF1ab/nsp771L71FCttTtt11B.1.6250.002353
ORF1ab/nsp771L71FCttTtt11B.1.6270.00202
ORF1ab/nsp771L71FCttTtt11B.1.6370.000073
ORF1ab/nsp771L71FCttTtt11B.1.780.008547
ORF1ab/nsp771L71FCttTtt11B.1.930.000934
ORF1ab/nsp771L71FCttTtt11B.310.003731
ORF1ab/nsp771L71FCttTtt11B.60.00091
ORF1ab/nsp771L71FCttTtt11C.10.002392
ORF1ab/nsp771L71FCttTtt11C.170.055556
ORF1ab/nsp771L71FCttTtt11N.90.005952
ORF1ab/nsp771L71FCttTtt11P.1.120.000484
ORF1ab/nsp771L71FCttTtt11P.1.150.000232
ORF1ab/nsp771L71FCttTtt11Q.20.000613