CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = A42del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp742A42delA3901deldelGCT---1212111966-11968

Details of the mutation A42del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp742A42delGCT---1212All0.000002
ORF1ab/nsp742A42delGCT---11AY.30.00001
ORF1ab/nsp742A42delGCT---11AY.4.50.000107
ORF1ab/nsp742A42delGCT---11AY.430.000004
ORF1ab/nsp742A42delGCT---11B.10.000009
ORF1ab/nsp742A42delGCT---11B.1.1.4480.002033
ORF1ab/nsp742A42delGCT---11B.1.1.70.000001
ORF1ab/nsp742A42delGCT---11B.1.20.000009
ORF1ab/nsp742A42delGCT---11B.1.258.30.001675
ORF1ab/nsp742A42delGCT---11B.1.3720.010989
ORF1ab/nsp742A42delGCT---11B.1.4150.014286
ORF1ab/nsp742A42delGCT---11B.1.617.20.000004
ORF1ab/nsp742A42delGCT---11N.40.004255