CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : Mut = A42S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp742A42SA3901SnonsynGctTct8888111966-11968

Details of the mutation A42S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp742A42SGctTct8888All0.000017
ORF1ab/nsp742A42SGctTct4444B.1.1.70.000039
ORF1ab/nsp742A42SGctTct88B.1.617.20.00003
ORF1ab/nsp742A42SGctTct66AY.670.002786
ORF1ab/nsp742A42SGctTct33AY.40.000005
ORF1ab/nsp742A42SGctTct22AY.230.000139
ORF1ab/nsp742A42SGctTct22AY.430.000009
ORF1ab/nsp742A42SGctTct22AY.750.000112
ORF1ab/nsp742A42SGctTct22B.10.000018
ORF1ab/nsp742A42SGctTct22B.1.1.630.000772
ORF1ab/nsp742A42SGctTct11AY.1020.000027
ORF1ab/nsp742A42SGctTct11AY.1030.000006
ORF1ab/nsp742A42SGctTct11AY.1200.000037
ORF1ab/nsp742A42SGctTct11AY.160.00038
ORF1ab/nsp742A42SGctTct11AY.250.000006
ORF1ab/nsp742A42SGctTct11AY.30.00001
ORF1ab/nsp742A42SGctTct11AY.390.000025
ORF1ab/nsp742A42SGctTct11AY.440.000006
ORF1ab/nsp742A42SGctTct11AY.700.000209
ORF1ab/nsp742A42SGctTct11B.1.1.1640.005155
ORF1ab/nsp742A42SGctTct11B.1.1.1740.003378
ORF1ab/nsp742A42SGctTct11B.1.1.3370.003597
ORF1ab/nsp742A42SGctTct11B.1.1570.002985
ORF1ab/nsp742A42SGctTct11B.1.177.350.000691
ORF1ab/nsp742A42SGctTct11B.1.177.820.000477
ORF1ab/nsp742A42SGctTct11B.1.20.000009
ORF1ab/nsp742A42SGctTct11B.1.5960.000087