CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp7 | 76 | L76L | L3935L | syn | Ctg | Ttg | 19425 | 7206 | 0.370965 | 12068-12070 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7206 | 19425 | All | 0.001378 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1409 | 8706 | B.1.1.7 | 0.001261 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2103 | 2140 | AY.29 | 0.033172 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 198 | 1242 | AY.103 | 0.001229 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 568 | 717 | B.1.2 | 0.005001 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 46 | 578 | P.1 | 0.000725 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 258 | 534 | AY.4 | 0.000402 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 202 | 508 | B.1.617.2 | 0.000761 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 283 | 341 | B.1 | 0.002592 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 36 | 295 | AY.3 | 0.000358 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 147 | 204 | AY.44 | 0.000895 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 8 | 200 | AY.42 | 0.000322 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 188 | 195 | AY.20 | 0.007307 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 11 | 162 | B.1.258 | 0.000732 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 59 | 160 | AY.43 | 0.000261 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 137 | 139 | AY.6 | 0.005635 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 68 | 135 | AY.25 | 0.000409 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 10 | 115 | B.1.221 | 0.00071 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 108 | AY.74 | 0.000231 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 94 | 94 | B.1.591 | 1 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 36 | 86 | B.1.1 | 0.000653 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 83 | B.1.1.284 | 0.000107 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 79 | 83 | P.1.15 | 0.018355 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 80 | AY.61 | 0.00021 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 79 | 80 | B.1.177.81 | 0.014956 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 74 | 77 | B.1.588 | 0.067334 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 66 | P.1.14 | 0.000239 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 34 | 62 | AY.39 | 0.00084 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 29 | 62 | B.1.177 | 0.000382 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 45 | 60 | B.1.1.222 | 0.00918 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 57 | 59 | B.1.258.17 | 0.005926 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 21 | 56 | AY.102 | 0.000557 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 21 | 56 | AY.4.2 | 0.000455 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7 | 56 | B.1.160 | 0.000218 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 53 | AY.4.3 | 0.000842 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 9 | 53 | B.1.351 | 0.000268 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 26 | 51 | B.1.36 | 0.003793 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 46 | AY.9 | 0.000203 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 26 | 44 | B.1.429 | 0.000612 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 44 | 44 | B.1.550 | 0.60274 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 35 | 42 | AY.46 | 0.003643 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 29 | 42 | B.1.637 | 0.002119 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 32 | 41 | AY.46.6 | 0.002311 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 17 | 41 | B.1.1.519 | 0.000675 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 34 | 34 | AY.9.1 | 0.002847 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 14 | 32 | B.1.177.86 | 0.002568 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 17 | 30 | C.37 | 0.001973 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 25 | 27 | AY.29.1 | 0.005513 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 9 | 23 | AY.26 | 0.000255 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 21 | 23 | B.1.526 | 0.000494 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 10 | 22 | AY.100 | 0.00046 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 11 | 22 | AY.119 | 0.000388 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 11 | 20 | AY.5 | 0.000227 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 20 | 20 | B.1.617.1 | 0.002579 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 19 | AY.98.1 | 0.000048 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 14 | 17 | AY.34.1 | 0.007139 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 17 | B.1.1.291 | 0.000742 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 17 | 17 | B.1.581 | 0.160377 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 8 | 16 | AY.9.2 | 0.000294 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 15 | AY.117 | 0.000254 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 10 | 15 | AY.47 | 0.000311 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 15 | 15 | B.1.595 | 0.003914 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 12 | 14 | AY.120 | 0.000446 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7 | 13 | AY.75 | 0.000392 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 12 | P.2 | 0.000933 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 8 | 11 | B | 0.001022 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 11 | 11 | B.1.1.1 | 0.003594 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 11 | B.1.1.294 | 0.003797 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 11 | B.1.234 | 0.000396 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 10 | B.1.596 | 0.000523 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 10 | 10 | B.1.621.1 | 0.005058 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 9 | AY.45 | 0.00073 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 9 | 9 | B.1.36.10 | 0.043062 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 9 | B.1.525 | 0.000226 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 9 | 9 | B.1.619 | 0.00784 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 9 | 9 | L.1 | 0.017143 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 9 | Q.8 | 0.00066 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7 | 8 | AY.36 | 0.001037 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 8 | B.1.243 | 0.000278 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 7 | AY.3.1 | 0.000426 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7 | 7 | AY.57 | 0.004593 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 7 | B.1.1.434 | 0.002091 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 7 | 7 | B.1.236 | 0.014374 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 7 | P.1.12 | 0.000968 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 7 | R.1 | 0.00045 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 6 | AY.23 | 0.000209 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 6 | AY.35 | 0.000233 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 6 | AY.4.2.1 | 0.000745 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 6 | AY.98 | 0.000079 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 6 | AY.99.2 | 0.000184 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 6 | B.1.1.306 | 0.000438 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 6 | B.1.1.355 | 0.092308 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 6 | B.1.36.17 | 0.000988 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 6 | B.1.426 | 0.006054 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 6 | B.1.427 | 0.000252 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 6 | 6 | B.1.438.1 | 0.000644 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 5 | AY.111 | 0.000549 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 5 | AY.116 | 0.000574 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 5 | AY.121 | 0.000135 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 5 | AY.46.4 | 0.000658 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 5 | AY.54 | 0.000191 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 5 | AY.7.1 | 0.000225 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 5 | AY.92 | 0.000287 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 5 | B.1.1.214 | 0.000222 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 5 | B.1.177.44 | 0.001557 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 5 | B.1.621 | 0.000177 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 5 | 5 | B.12 | 0.032051 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 5 | P.1.17 | 0.000485 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 4 | AY.106 | 0.001005 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 4 | AY.34 | 0.000097 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 4 | AY.59 | 0.00053 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | AY.75.1 | 0.000721 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 4 | AZ.2 | 0.002463 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | B.1.1.432 | 0.005063 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | B.1.177.79 | 0.009368 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 4 | B.1.240 | 0.000647 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 4 | B.1.241 | 0.002435 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 4 | B.1.36.8 | 0.002 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | B.1.371 | 0.004489 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 4 | 4 | N.5 | 0.007067 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | AY.109 | 0.002219 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 3 | AY.13 | 0.000161 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | AY.39.1 | 0.000079 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | AY.4.5 | 0.000215 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | AY.68 | 0.000547 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 3 | AY.7 | 0.000196 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.1.1.157 | 0.00274 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 3 | B.1.1.216 | 0.00089 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.1.1.231 | 0.009288 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.1.1.333 | 0.003229 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | B.1.177.7 | 0.00033 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 3 | B.1.400 | 0.000429 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | B.1.416 | 0.002538 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | B.1.466.2 | 0.000782 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.1.520 | 0.065217 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 3 | B.1.623 | 0.000536 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | D.2 | 0.00015 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 3 | Q.1 | 0.000253 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | AY.101 | 0.00049 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | AY.14 | 0.000088 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | AY.71 | 0.000475 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | AY.84 | 0.000437 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.1.33 | 0.000421 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.1.389 | 0.012121 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.1.39 | 0.00051 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.1.398 | 0.003226 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.1.52 | 0.02439 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.112 | 0.010363 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.177.20 | 0.003035 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.219 | 0.018868 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.232 | 0.000537 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.237 | 0.00995 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.265 | 0.002541 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.270 | 0.011236 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.311 | 0.000275 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.342 | 0.2 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.456 | 0.003268 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | B.1.459 | 0.004082 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.503 | 0.004975 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | C.23 | 0.011628 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 2 | P.1.16 | 0.000374 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 2 | 2 | V.1 | 0.045455 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.251 | 0.007937 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.1.98 | 0.018519 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.159 | 0.012195 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.177.85 | 0.005435 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.264 | 0.012346 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.302 | 0.013333 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.37 | 0.014706 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.493 | 0.025641 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.499.1 | 0.111111 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.6 | 0.017241 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | C.30.1 | 0.006711 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp7 | 76 | L76L | Ctg | Ttg | 1 | 1 | S.1 | 0.00495 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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