CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp7 | 71 | L71F | L3930F | nonsyn | Ctt | Ttt | 15431 | 15426 | 0.999676 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71F | L3930F | nonsyn | CtT | TtC | 15431 | 5 | 0.000324023 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71L | L3930L | syn | ctT | ctC | 889 | 855 | 0.961755 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71L | L3930L | syn | ctT | ctG | 889 | 28 | 0.0314961 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71L | L3930L | syn | ctT | ctA | 889 | 6 | 0.00674916 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71P | L3930P | nonsyn | cTt | cCt | 28 | 27 | 0.964286 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71P | L3930P | nonsyn | cTT | cCC | 28 | 1 | 0.0357143 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71I | L3930I | nonsyn | Ctt | Att | 26 | 26 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71V | L3930V | nonsyn | Ctt | Gtt | 14 | 14 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71del | L3930del | del | CTT | --- | 12 | 12 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71del1 | L3930del1 | del | cTt | c-t | 7 | 7 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71del2 | L3930del2 | del | cTT | c-- | 2 | 2 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71R | L3930R | nonsyn | cTT | cGC | 2 | 1 | 0.5 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71R | L3930R | nonsyn | cTt | cGt | 2 | 1 | 0.5 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71H | L3930H | nonsyn | cTt | cAt | 1 | 1 | 1 | 12053-12055 |
ORF1ab/nsp7 | 71 | L71A | L3930A | nonsyn | CTt | GCt | 1 | 1 | 1 | 12053-12055 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 15426 | 15431 | All | 0.00295 |
ORF1ab/nsp7 | 71 | L71F | CtT | TtC | 5 | 15431 | All | 0.000001 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5327 | 5327 | P.2 | 0.994214 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2158 | 2158 | B.1.1.28 | 0.671646 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2007 | 2007 | AY.4 | 0.003124 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 855 | 889 | All | 0.000164 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 28 | 889 | All | 0.000005 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctA | 6 | 889 | All | 0.000001 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 677 | 683 | B.1.1.7 | 0.000606 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 6 | 683 | B.1.1.7 | 0.000005 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 621 | 621 | P.3 | 0.990431 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 518 | 518 | AY.39 | 0.012801 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 427 | 427 | B.1.2 | 0.00376 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 318 | 318 | P.6 | 1 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 314 | 314 | B.1.617.2 | 0.001182 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 223 | 223 | P.7 | 0.973799 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 222 | 222 | B.1.1.7 | 0.000199 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 187 | 187 | AY.46.4 | 0.030762 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 185 | 185 | B.1 | 0.001695 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 177 | 177 | B.1.576 | 0.160471 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 175 | 175 | B.1.429 | 0.004118 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 153 | 153 | B.1.617.1 | 0.019732 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 150 | 150 | AY.42 | 0.006035 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 128 | 128 | AY.25 | 0.00077 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 125 | 125 | AY.3 | 0.001243 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 123 | 123 | AY.4.2 | 0.002668 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 115 | 116 | B.1.1 | 0.002086 |
ORF1ab/nsp7 | 71 | L71F | CtT | TtC | 1 | 116 | B.1.1 | 0.000018 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 112 | 112 | B.1.243 | 0.007793 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 105 | 105 | AY.29 | 0.001656 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 98 | 98 | AY.43 | 0.000434 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 83 | 83 | B.1.177 | 0.001093 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 75 | 75 | B.1.363 | 0.974026 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 66 | 66 | B.1.1.12 | 0.492537 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 47 | 47 | AY.103 | 0.000292 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 47 | 47 | B.1.160 | 0.001466 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 42 | 42 | AY.119 | 0.001483 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 41 | 41 | AY.100 | 0.001886 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 39 | 39 | B.1.617.2 | 0.000147 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 38 | 38 | B.1.240 | 0.008191 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 35 | 35 | AY.44 | 0.000213 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 32 | 32 | B.1.1.222 | 0.006528 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 31 | 31 | AY.61 | 0.003248 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 31 | 31 | AY.7 | 0.006076 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 31 | 31 | B.1.1.332 | 0.96875 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 27 | 28 | All | 0.000005 |
ORF1ab/nsp7 | 71 | L71P | cTT | cCC | 1 | 28 | All | 0 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 28 | 28 | AY.119 | 0.000989 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 27 | 27 | B.1.377 | 0.123288 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 26 | 26 | All | 0.000005 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 26 | 26 | B.1.400 | 0.011154 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 25 | 25 | AY.102 | 0.000663 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 24 | 24 | AY.26 | 0.000679 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 23 | 23 | AY.20 | 0.000894 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 23 | 23 | B.1.221 | 0.001634 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 21 | 21 | AY.33 | 0.001402 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 20 | 20 | AY.43 | 0.000089 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 16 | 19 | AY.103 | 0.000099 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 3 | 19 | AY.103 | 0.000019 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 19 | 19 | B.1.1.519 | 0.000755 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 18 | 18 | B.1.241 | 0.01461 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 16 | 17 | AY.4 | 0.000025 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 1 | 17 | AY.4 | 0.000002 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 17 | 17 | B.1.1.284 | 0.001826 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 17 | 17 | B.1.406 | 0.10303 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 17 | 17 | B.1.526 | 0.0004 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 17 | 17 | B.1.575 | 0.005158 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 16 | 16 | B.1.298 | 0.033827 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 15 | 15 | AY.121 | 0.00203 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 9 | 15 | AY.20 | 0.00035 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctA | 6 | 15 | AY.20 | 0.000233 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 15 | 15 | AY.46.2 | 0.00953 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 15 | 15 | AY.9 | 0.001014 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 15 | 15 | P.1 | 0.000236 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 14 | 14 | All | 0.000003 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 14 | 14 | AY.98.1 | 0.000678 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 13 | 13 | B.1.1.413 | 0.089655 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 13 | 13 | B.1.36 | 0.001897 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 13 | 13 | B.1.471 | 0.035519 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 13 | 13 | B.1.621 | 0.001151 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 12 | 12 | All | 0.000002 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 12 | 12 | B.1.1.277 | 0.009105 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 12 | 12 | B.1.1.432 | 0.01519 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 12 | 12 | B.1.609 | 0.005753 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 11 | 11 | AY.116 | 0.003155 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 10 | 10 | B.10 | 0.082645 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 9 | 9 | AY.13 | 0.001449 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 9 | 9 | AY.5 | 0.000186 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 9 | 9 | B.1.36.36 | 0.005418 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 8 | 8 | AY.39 | 0.000198 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp7 | 71 | L71del1 | cTt | c-t | 7 | 7 | All | 0.000001 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 7 | 7 | B | 0.000895 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 7 | 7 | B.1.396 | 0.00494 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 6 | 6 | AY.104 | 0.011905 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 6 | 6 | B.1.1.409 | 0.016997 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 6 | 6 | P.5 | 0.082192 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | AY.120.1 | 0.001605 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | B.1.1.311 | 0.001791 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 4 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp7 | 71 | L71P | cTT | cCC | 1 | 5 | B.1.1.7 | 0.000001 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | B.1.351 | 0.000149 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | B.1.499 | 0.005252 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | C.36 | 0.004554 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 5 | 5 | P.1.1 | 0.001588 |
ORF1ab/nsp7 | 71 | L71F | CtT | TtC | 4 | 4 | 0.222222 | |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | AY.71 | 0.0019 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | B.1.1.261 | 0.034483 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AU.2 | 0.007264 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.1.376 | 0.017857 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.110.3 | 0.002155 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.36.10 | 0.014354 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.36.17 | 0.001482 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.362 | 0.004622 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp7 | 71 | L71del2 | cTT | c-- | 2 | 2 | All | 0 |
ORF1ab/nsp7 | 71 | L71R | cTt | cGt | 1 | 2 | All | 0 |
ORF1ab/nsp7 | 71 | L71R | cTT | cGC | 1 | 2 | All | 0 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp7 | 71 | L71del1 | cTt | c-t | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.464 | 0.002946 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.1.528 | 0.009615 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp7 | 71 | L71del1 | cTt | c-t | 2 | 2 | B.1.264 | 0.024691 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.36.19 | 0.018519 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.551 | 0.002581 |
ORF1ab/nsp7 | 71 | L71del1 | cTt | c-t | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.597 | 0.009259 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | B.1.602 | 0.013072 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | C.32 | 0.046512 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 2 | 2 | P.1.9 | 0.009615 |
ORF1ab/nsp7 | 71 | L71A | CTt | GCt | 1 | 1 | 0.055556 | |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | 0.055556 | |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AA.2 | 0.007692 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AD.1 | 0.004115 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp7 | 71 | L71A | CTt | GCt | 1 | 1 | All | 0 |
ORF1ab/nsp7 | 71 | L71H | cTt | cAt | 1 | 1 | All | 0 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp7 | 71 | L71del2 | cTT | c-- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp7 | 71 | L71R | cTT | cGC | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp7 | 71 | L71H | cTt | cAt | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.122 | 0.045455 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.128 | 0.007092 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.208 | 0.012195 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.299 | 0.012195 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.362 | 0.005618 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.463 | 0.0625 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.1.98 | 0.018519 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.151 | 0.011111 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.161 | 0.017241 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.192 | 0.009259 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp7 | 71 | L71del2 | cTT | c-- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.23 | 0.006061 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp7 | 71 | L71V | Ctt | Gtt | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.341 | 0.022727 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.407 | 0.035714 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.499.1 | 0.111111 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.545 | 0.014493 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp7 | 71 | L71P | cTt | cCt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp7 | 71 | L71del1 | cTt | c-t | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctG | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp7 | 71 | L71R | cTt | cGt | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp7 | 71 | L71I | Ctt | Att | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp7 | 71 | L71del | CTT | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp7 | 71 | L71L | ctT | ctC | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp7 | 71 | L71F | Ctt | Ttt | 1 | 1 | Q.2 | 0.000613 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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