CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 69

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp769N69NN3928NsynaaCaaT4737147371112047-12049
ORF1ab/nsp769N69TN3928TnonsynaAcaCc74680.91891912047-12049
ORF1ab/nsp769N69TN3928TnonsynaACaCT7460.081081112047-12049
ORF1ab/nsp769N69SN3928SnonsynaAcaGc64620.9687512047-12049
ORF1ab/nsp769N69SN3928SnonsynaACaGT6420.0312512047-12049
ORF1ab/nsp769N69KN3928KnonsynaaCaaA41380.92682912047-12049
ORF1ab/nsp769N69KN3928KnonsynaaCaaG4130.073170712047-12049
ORF1ab/nsp769N69delN3928deldelAAC---1313112047-12049
ORF1ab/nsp769N69YN3928YnonsynAacTac1111112047-12049
ORF1ab/nsp769N69DN3928DnonsynAacGac1111112047-12049
ORF1ab/nsp769N69HN3928HnonsynAacCac66112047-12049
ORF1ab/nsp769N69IN3928InonsynaAcaTc33112047-12049
ORF1ab/nsp769N69FN3928FnonsynAAcTTc22112047-12049
ORF1ab/nsp769N69del1N3928del1delaaCaa-22112047-12049
ORF1ab/nsp769N69GN3928GnonsynAAcGGc11112047-12049

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp769N69NaaCaaT4737147371All0.00906
ORF1ab/nsp769N69NaaCaaT3093730937AY.470.962301
ORF1ab/nsp769N69NaaCaaT45984598B.1.1.2140.254991
ORF1ab/nsp769N69NaaCaaT44574457B.1.1.70.00399
ORF1ab/nsp769N69NaaCaaT896896B.1.5680.995556
ORF1ab/nsp769N69NaaCaaT680680AY.40.001058
ORF1ab/nsp769N69NaaCaaT620620P.30.988836
ORF1ab/nsp769N69NaaCaaT484484B.1.617.20.001822
ORF1ab/nsp769N69NaaCaaT458458B.10.004195
ORF1ab/nsp769N69NaaCaaT413413AY.1030.002564
ORF1ab/nsp769N69NaaCaaT373373B.1.20.003284
ORF1ab/nsp769N69NaaCaaT326326P.10.005136
ORF1ab/nsp769N69NaaCaaT253253AY.50.005224
ORF1ab/nsp769N69NaaCaaT228228B.1.4290.005365
ORF1ab/nsp769N69NaaCaaT191191AY.430.000846
ORF1ab/nsp769N69NaaCaaT176176AY.200.00684
ORF1ab/nsp769N69NaaCaaT160160B.1.10.002903
ORF1ab/nsp769N69NaaCaaT129129B.1.2580.008585
ORF1ab/nsp769N69NaaCaaT8989AY.440.000542
ORF1ab/nsp769N69NaaCaaT8484A.2.50.041916
ORF1ab/nsp769N69NaaCaaT7979AY.30.000786
ORF1ab/nsp769N69TaAcaCc6874All0.000013
ORF1ab/nsp769N69TaACaCT674All0.000001
ORF1ab/nsp769N69SaAcaGc6264All0.000012
ORF1ab/nsp769N69SaACaGT264All0
ORF1ab/nsp769N69NaaCaaT6363AY.75.10.01136
ORF1ab/nsp769N69NaaCaaT6262B.1.1.5190.002462
ORF1ab/nsp769N69NaaCaaT5353AY.250.000319
ORF1ab/nsp769N69NaaCaaT5151AY.1000.002346
ORF1ab/nsp769N69TaAcaCc5050AY.430.000222
ORF1ab/nsp769N69NaaCaaT4949B.1.3510.001457
ORF1ab/nsp769N69NaaCaaT4343B.1.177.600.009393
ORF1ab/nsp769N69NaaCaaT4242AY.290.000662
ORF1ab/nsp769N69KaaCaaA3841All0.000007
ORF1ab/nsp769N69KaaCaaG341All0.000001
ORF1ab/nsp769N69NaaCaaT4141AY.390.001013
ORF1ab/nsp769N69NaaCaaT3737B.1.1770.000487
ORF1ab/nsp769N69NaaCaaT3535AY.1190.001236
ORF1ab/nsp769N69NaaCaaT3535B0.004473
ORF1ab/nsp769N69KaaCaaA3133B.1.1.70.000028
ORF1ab/nsp769N69KaaCaaG233B.1.1.70.000002
ORF1ab/nsp769N69NaaCaaT3232AY.620.013943
ORF1ab/nsp769N69NaaCaaT3232R.10.00288
ORF1ab/nsp769N69NaaCaaT3131AY.590.016419
ORF1ab/nsp769N69NaaCaaT3131AY.650.016525
ORF1ab/nsp769N69NaaCaaT3030AY.1130.004272
ORF1ab/nsp769N69NaaCaaT2727AY.4.50.002902
ORF1ab/nsp769N69SaAcaGc2727B.1.1.70.000024
ORF1ab/nsp769N69NaaCaaT2727C.370.003134
ORF1ab/nsp769N69NaaCaaT2525AY.750.001401
ORF1ab/nsp769N69NaaCaaT2424AY.370.007585
ORF1ab/nsp769N69NaaCaaT2424AY.4.20.000521
ORF1ab/nsp769N69NaaCaaT2323AY.610.00241
ORF1ab/nsp769N69NaaCaaT2323AY.9.20.000845
ORF1ab/nsp769N69NaaCaaT2121N.50.037102
ORF1ab/nsp769N69NaaCaaT2020P.1.150.004647
ORF1ab/nsp769N69NaaCaaT1818B.1.1600.000561
ORF1ab/nsp769N69NaaCaaT1818Q.10.002274
ORF1ab/nsp769N69NaaCaaT1717B.1.2430.001183
ORF1ab/nsp769N69NaaCaaT1717P.1.100.004581
ORF1ab/nsp769N69NaaCaaT1616AY.1170.001352
ORF1ab/nsp769N69NaaCaaT1616AY.260.000453
ORF1ab/nsp769N69NaaCaaT1616AY.360.002371
ORF1ab/nsp769N69NaaCaaT1515AY.1200.000558
ORF1ab/nsp769N69NaaCaaT1515B.1.2340.001979
ORF1ab/nsp769N69NaaCaaT1515B.1.5260.000353
ORF1ab/nsp769N69NaaCaaT1414AY.420.000563
ORF1ab/nsp769N69delAAC---1313All0.000002
ORF1ab/nsp769N69NaaCaaT1313AY.1180.000814
ORF1ab/nsp769N69NaaCaaT1313AY.540.00124
ORF1ab/nsp769N69NaaCaaT1313AZ.10.011275
ORF1ab/nsp769N69NaaCaaT1313B.1.6210.001151
ORF1ab/nsp769N69NaaCaaT1212AY.1210.001624
ORF1ab/nsp769N69NaaCaaT1212B.1.4480.031496
ORF1ab/nsp769N69DAacGac1111All0.000002
ORF1ab/nsp769N69YAacTac1111All0.000002
ORF1ab/nsp769N69NaaCaaT1111B.1.6370.000804
ORF1ab/nsp769N69NaaCaaT1010AY.3.10.000853
ORF1ab/nsp769N69NaaCaaT1010AY.380.004993
ORF1ab/nsp769N69NaaCaaT1010AY.4.2.10.00149
ORF1ab/nsp769N69NaaCaaT1010B.1.1.4160.00905
ORF1ab/nsp769N69NaaCaaT1010C.36.30.005672
ORF1ab/nsp769N69NaaCaaT1010P.1.120.00484
ORF1ab/nsp769N69NaaCaaT99AY.230.000628
ORF1ab/nsp769N69NaaCaaT99B.1.177.560.006008
ORF1ab/nsp769N69NaaCaaT88AY.120.20.010283
ORF1ab/nsp769N69NaaCaaT88B.1.177.810.001515
ORF1ab/nsp769N69NaaCaaT88B.1.2320.004299
ORF1ab/nsp769N69NaaCaaT88B.1.5250.000905
ORF1ab/nsp769N69TaAcaCc88B.1.5260.000188
ORF1ab/nsp769N69NaaCaaT77AY.140.000616
ORF1ab/nsp769N69NaaCaaT77AY.60.000288
ORF1ab/nsp769N69NaaCaaT77AY.98.10.000339
ORF1ab/nsp769N69NaaCaaT77B.1.2390.008547
ORF1ab/nsp769N69NaaCaaT77B.1.4270.000353
ORF1ab/nsp769N69NaaCaaT77B.1.5960.00061
ORF1ab/nsp769N69NaaCaaT77B.1.617.10.000903
ORF1ab/nsp769N69NaaCaaT77P.1.140.000335
ORF1ab/nsp769N69HAacCac66All0.000001
ORF1ab/nsp769N69NaaCaaT66AY.320.003195
ORF1ab/nsp769N69NaaCaaT66AY.330.000401
ORF1ab/nsp769N69NaaCaaT66AY.520.004886
ORF1ab/nsp769N69NaaCaaT66AY.690.00112
ORF1ab/nsp769N69delAAC---66B.1.1.70.000005
ORF1ab/nsp769N69NaaCaaT66B.1.3110.001647
ORF1ab/nsp769N69NaaCaaT66B.1.6120.015915
ORF1ab/nsp769N69NaaCaaT55AY.1140.001156
ORF1ab/nsp769N69NaaCaaT55AY.130.000805
ORF1ab/nsp769N69NaaCaaT55AY.240.002155
ORF1ab/nsp769N69NaaCaaT55AY.46.60.000361
ORF1ab/nsp769N69NaaCaaT55AY.530.001438
ORF1ab/nsp769N69NaaCaaT55AY.670.002321
ORF1ab/nsp769N69NaaCaaT55AY.740.000578
ORF1ab/nsp769N69NaaCaaT55AY.980.000395
ORF1ab/nsp769N69NaaCaaT55B.1.1.2160.004452
ORF1ab/nsp769N69NaaCaaT55B.1.1.3110.001791
ORF1ab/nsp769N69NaaCaaT55B.1.1.670.022831
ORF1ab/nsp769N69NaaCaaT55B.1.160.160.004647
ORF1ab/nsp769N69SaAcaGc55B.1.20.000044
ORF1ab/nsp769N69NaaCaaT55B.1.2210.000355
ORF1ab/nsp769N69NaaCaaT55B.1.4530.016181
ORF1ab/nsp769N69YAacTac55B.1.5260.000118
ORF1ab/nsp769N69NaaCaaT55B.1.5820.002453
ORF1ab/nsp769N69NaaCaaT55B.1.619.10.003207
ORF1ab/nsp769N69TaACaCT440.222222
ORF1ab/nsp769N69NaaCaaT44AY.1090.002959
ORF1ab/nsp769N69NaaCaaT44AY.1100.000451
ORF1ab/nsp769N69NaaCaaT44AY.1110.000733
ORF1ab/nsp769N69TaAcaCc44AY.39.10.000158
ORF1ab/nsp769N69NaaCaaT44AY.450.000487
ORF1ab/nsp769N69NaaCaaT44AY.500.003197
ORF1ab/nsp769N69NaaCaaT44AY.7.10.000451
ORF1ab/nsp769N69NaaCaaT44B.1.1.3480.003185
ORF1ab/nsp769N69NaaCaaT44B.1.1.3700.050633
ORF1ab/nsp769N69TaAcaCc34B.1.1.70.000003
ORF1ab/nsp769N69TaACaCT14B.1.1.70.000001
ORF1ab/nsp769N69NaaCaaT44B.1.258.170.000416
ORF1ab/nsp769N69NaaCaaT44B.1.5610.001588
ORF1ab/nsp769N69NaaCaaT44B.1.6090.001918
ORF1ab/nsp769N69SaACaGT24P.10.000032
ORF1ab/nsp769N69SaAcaGc24P.10.000032
ORF1ab/nsp769N69IaAcaTc33All0.000001
ORF1ab/nsp769N69NaaCaaT33AY.270.000194
ORF1ab/nsp769N69NaaCaaT33AY.39.10.000119
ORF1ab/nsp769N69NaaCaaT33AY.39.20.004622
ORF1ab/nsp769N69KaaCaaA23AY.40.000003
ORF1ab/nsp769N69KaaCaaG13AY.40.000002
ORF1ab/nsp769N69HAacCac33AY.440.000018
ORF1ab/nsp769N69NaaCaaT33AY.5.30.001012
ORF1ab/nsp769N69NaaCaaT33AY.5.40.00083
ORF1ab/nsp769N69NaaCaaT33AY.700.000626
ORF1ab/nsp769N69NaaCaaT33B.1.1.2630.004673
ORF1ab/nsp769N69NaaCaaT33B.1.1.280.000934
ORF1ab/nsp769N69NaaCaaT33B.1.1.2840.000322
ORF1ab/nsp769N69NaaCaaT33B.1.1.2850.019608
ORF1ab/nsp769N69NaaCaaT33B.1.1.390.001529
ORF1ab/nsp769N69NaaCaaT33B.1.1.570.034483
ORF1ab/nsp769N69NaaCaaT33B.1.1.630.001157
ORF1ab/nsp769N69NaaCaaT33B.1.1490.010274
ORF1ab/nsp769N69NaaCaaT33B.1.177.100.002634
ORF1ab/nsp769N69NaaCaaT33B.1.177.750.003122
ORF1ab/nsp769N69NaaCaaT33B.1.177.860.00055
ORF1ab/nsp769N69NaaCaaT33B.1.2400.000647
ORF1ab/nsp769N69NaaCaaT33B.1.360.000438
ORF1ab/nsp769N69NaaCaaT33B.1.36.290.001552
ORF1ab/nsp769N69NaaCaaT33B.1.3970.014563
ORF1ab/nsp769N69SaAcaGc33B.1.4290.000071
ORF1ab/nsp769N69NaaCaaT33B.1.4780.035294
ORF1ab/nsp769N69NaaCaaT33B.1.5640.001278
ORF1ab/nsp769N69NaaCaaT33B.1.6230.001609
ORF1ab/nsp769N69NaaCaaT33N.60.021277
ORF1ab/nsp769N69NaaCaaT33P.1.20.003468
ORF1ab/nsp769N69NaaCaaT33P.50.041096
ORF1ab/nsp769N69NaaCaaT33Q.80.000495
ORF1ab/nsp769N69del1aaCaa-220.111111
ORF1ab/nsp769N69delAAC---220.111111
ORF1ab/nsp769N69FAAcTTc22All0
ORF1ab/nsp769N69del1aaCaa-22All0
ORF1ab/nsp769N69NaaCaaT22AY.1060.00067
ORF1ab/nsp769N69NaaCaaT22AY.1070.000932
ORF1ab/nsp769N69NaaCaaT22AY.1080.002205
ORF1ab/nsp769N69NaaCaaT22AY.116.10.000623
ORF1ab/nsp769N69NaaCaaT22AY.160.000759
ORF1ab/nsp769N69SaAcaGc22AY.290.000032
ORF1ab/nsp769N69DAacGac22AY.30.00002
ORF1ab/nsp769N69SaAcaGc22AY.30.00002
ORF1ab/nsp769N69HAacCac22AY.40.000003
ORF1ab/nsp769N69NaaCaaT22AY.46.20.001271
ORF1ab/nsp769N69NaaCaaT22AY.550.001835
ORF1ab/nsp769N69NaaCaaT22AY.710.00095
ORF1ab/nsp769N69NaaCaaT22AY.770.002255
ORF1ab/nsp769N69NaaCaaT22AY.90.000135
ORF1ab/nsp769N69NaaCaaT22AY.91.10.00813
ORF1ab/nsp769N69NaaCaaT22AY.950.001522
ORF1ab/nsp769N69NaaCaaT22AY.99.10.003106
ORF1ab/nsp769N69delAAC---22B.10.000018
ORF1ab/nsp769N69NaaCaaT22B.1.1.1530.002191
ORF1ab/nsp769N69NaaCaaT22B.1.1.2220.000408
ORF1ab/nsp769N69NaaCaaT22B.1.1.2770.001517
ORF1ab/nsp769N69NaaCaaT22B.1.1.3160.00185
ORF1ab/nsp769N69NaaCaaT22B.1.1.3260.003521
ORF1ab/nsp769N69NaaCaaT22B.1.1.4110.029412
ORF1ab/nsp769N69NaaCaaT22B.1.1.4340.000697
ORF1ab/nsp769N69NaaCaaT22B.1.1.4640.002946
ORF1ab/nsp769N69NaaCaaT22B.1.1470.001512
ORF1ab/nsp769N69SaAcaGc22B.1.1770.000026
ORF1ab/nsp769N69NaaCaaT22B.1.177.540.001213
ORF1ab/nsp769N69NaaCaaT22B.1.177.90.002663
ORF1ab/nsp769N69NaaCaaT22B.1.3490.00143
ORF1ab/nsp769N69NaaCaaT22B.1.351.50.001199
ORF1ab/nsp769N69NaaCaaT22B.1.36.10.002281
ORF1ab/nsp769N69NaaCaaT22B.1.4090.001563
ORF1ab/nsp769N69NaaCaaT22B.1.4800.004975
ORF1ab/nsp769N69NaaCaaT22B.1.5760.001813
ORF1ab/nsp769N69NaaCaaT22B.1.621.10.001012
ORF1ab/nsp769N69NaaCaaT22B.1.6280.000705
ORF1ab/nsp769N69NaaCaaT22C.350.001548
ORF1ab/nsp769N69DAacGac22D.50.00995
ORF1ab/nsp769N69NaaCaaT22P.1.10.000635
ORF1ab/nsp769N69NaaCaaT22P.1.170.000324
ORF1ab/nsp769N69NaaCaaT22Q.20.001227
ORF1ab/nsp769N69KaaCaaA110.055556
ORF1ab/nsp769N69NaaCaaT11A0.000387
ORF1ab/nsp769N69FAAcTTc11A0.000387
ORF1ab/nsp769N69SaAcaGc11A.2.20.001689
ORF1ab/nsp769N69NaaCaaT11A.2.30.004739
ORF1ab/nsp769N69NaaCaaT11A.2.5.20.001572
ORF1ab/nsp769N69SaAcaGc11A.50.001923
ORF1ab/nsp769N69NaaCaaT11AD.20.000219
ORF1ab/nsp769N69GAAcGGc11All0
ORF1ab/nsp769N69NaaCaaT11AU.30.00211
ORF1ab/nsp769N69NaaCaaT11AY.100.00053
ORF1ab/nsp769N69NaaCaaT11AY.1050.000643
ORF1ab/nsp769N69NaaCaaT11AY.120.10.000321
ORF1ab/nsp769N69SaAcaGc11AY.1210.000135
ORF1ab/nsp769N69TaAcaCc11AY.130.000161
ORF1ab/nsp769N69SaAcaGc11AY.200.000039
ORF1ab/nsp769N69NaaCaaT11AY.23.10.000417
ORF1ab/nsp769N69DAacGac11AY.250.000006
ORF1ab/nsp769N69KaaCaaA11AY.250.000006
ORF1ab/nsp769N69YAacTac11AY.30.00001
ORF1ab/nsp769N69DAacGac11AY.3.10.000085
ORF1ab/nsp769N69SaAcaGc11AY.330.000067
ORF1ab/nsp769N69NaaCaaT11AY.340.000097
ORF1ab/nsp769N69NaaCaaT11AY.34.10.00051
ORF1ab/nsp769N69SaAcaGc11AY.40.000002
ORF1ab/nsp769N69TaAcaCc11AY.40.000002
ORF1ab/nsp769N69SaAcaGc11AY.430.000004
ORF1ab/nsp769N69delAAC---11AY.430.000004
ORF1ab/nsp769N69DAacGac11AY.430.000004
ORF1ab/nsp769N69NaaCaaT11AY.46.40.000165
ORF1ab/nsp769N69NaaCaaT11AY.46.50.000198
ORF1ab/nsp769N69SaAcaGc11AY.46.60.000072
ORF1ab/nsp769N69NaaCaaT11AY.480.000465
ORF1ab/nsp769N69SaAcaGc11AY.50.000021
ORF1ab/nsp769N69NaaCaaT11AY.510.000909
ORF1ab/nsp769N69NaaCaaT11AY.560.001605
ORF1ab/nsp769N69NaaCaaT11AY.580.000907
ORF1ab/nsp769N69NaaCaaT11AY.600.000938
ORF1ab/nsp769N69TaAcaCc11AY.610.000105
ORF1ab/nsp769N69NaaCaaT11AY.660.00107
ORF1ab/nsp769N69NaaCaaT11AY.680.000274
ORF1ab/nsp769N69NaaCaaT11AY.70.000196
ORF1ab/nsp769N69SaAcaGc11AY.700.000209
ORF1ab/nsp769N69NaaCaaT11AY.80.000606
ORF1ab/nsp769N69KaaCaaA11AY.850.000427
ORF1ab/nsp769N69NaaCaaT11AY.870.000833
ORF1ab/nsp769N69NaaCaaT11AY.880.000884
ORF1ab/nsp769N69KaaCaaA11AY.90.000068
ORF1ab/nsp769N69NaaCaaT11AY.9.10.000084
ORF1ab/nsp769N69NaaCaaT11AY.9.2.10.001976
ORF1ab/nsp769N69YAacTac11AY.920.000287
ORF1ab/nsp769N69NaaCaaT11AY.940.000443
ORF1ab/nsp769N69NaaCaaT11AY.990.001049
ORF1ab/nsp769N69NaaCaaT11AY.99.20.000092
ORF1ab/nsp769N69SaAcaGc11B.10.000009
ORF1ab/nsp769N69YAacTac11B.1.10.000018
ORF1ab/nsp769N69TaACaCT11B.1.10.000018
ORF1ab/nsp769N69NaaCaaT11B.1.1.1170.009709
ORF1ab/nsp769N69NaaCaaT11B.1.1.1350.004695
ORF1ab/nsp769N69NaaCaaT11B.1.1.1390.022727
ORF1ab/nsp769N69NaaCaaT11B.1.1.2070.001182
ORF1ab/nsp769N69NaaCaaT11B.1.1.2250.007194
ORF1ab/nsp769N69NaaCaaT11B.1.1.2540.011236
ORF1ab/nsp769N69NaaCaaT11B.1.1.2560.013699
ORF1ab/nsp769N69NaaCaaT11B.1.1.2610.008621
ORF1ab/nsp769N69NaaCaaT11B.1.1.2860.002899
ORF1ab/nsp769N69NaaCaaT11B.1.1.2940.001266
ORF1ab/nsp769N69NaaCaaT11B.1.1.3040.002809
ORF1ab/nsp769N69DAacGac11B.1.1.3060.000438
ORF1ab/nsp769N69YAacTac11B.1.1.3260.001761
ORF1ab/nsp769N69NaaCaaT11B.1.1.330.000421
ORF1ab/nsp769N69NaaCaaT11B.1.1.3360.016667
ORF1ab/nsp769N69NaaCaaT11B.1.1.3680.003086
ORF1ab/nsp769N69NaaCaaT11B.1.1.3710.010417
ORF1ab/nsp769N69NaaCaaT11B.1.1.3720.000689
ORF1ab/nsp769N69NaaCaaT11B.1.1.410.006329
ORF1ab/nsp769N69NaaCaaT11B.1.1.4350.034483
ORF1ab/nsp769N69delAAC---11B.1.1.4480.002033
ORF1ab/nsp769N69NaaCaaT11B.1.1.450.014085
ORF1ab/nsp769N69NaaCaaT11B.1.1.5000.02
ORF1ab/nsp769N69NaaCaaT11B.1.1.5240.020833
ORF1ab/nsp769N69IaAcaTc11B.1.1.70.000001
ORF1ab/nsp769N69GAAcGGc11B.1.1.70.000001
ORF1ab/nsp769N69YAacTac11B.1.1.70.000001
ORF1ab/nsp769N69DAacGac11B.1.1.70.000001
ORF1ab/nsp769N69NaaCaaT11B.1.1.830.00271
ORF1ab/nsp769N69NaaCaaT11B.1.1270.002198
ORF1ab/nsp769N69DAacGac11B.1.1700.00431
ORF1ab/nsp769N69SaAcaGc11B.1.177.180.00116
ORF1ab/nsp769N69NaaCaaT11B.1.177.210.000076
ORF1ab/nsp769N69SaAcaGc11B.1.177.230.003236
ORF1ab/nsp769N69NaaCaaT11B.1.177.40.000211
ORF1ab/nsp769N69NaaCaaT11B.1.177.420.000894
ORF1ab/nsp769N69NaaCaaT11B.1.177.440.000519
ORF1ab/nsp769N69NaaCaaT11B.1.177.570.000281
ORF1ab/nsp769N69NaaCaaT11B.1.177.580.001332
ORF1ab/nsp769N69NaaCaaT11B.1.177.650.000665
ORF1ab/nsp769N69NaaCaaT11B.1.177.70.000165
ORF1ab/nsp769N69NaaCaaT11B.1.177.720.00339
ORF1ab/nsp769N69NaaCaaT11B.1.177.820.000477
ORF1ab/nsp769N69NaaCaaT11B.1.2100.002132
ORF1ab/nsp769N69NaaCaaT11B.1.2120.016667
ORF1ab/nsp769N69NaaCaaT11B.1.230.006061
ORF1ab/nsp769N69IaAcaTc11B.1.2340.000132
ORF1ab/nsp769N69SaAcaGc11B.1.2580.000067
ORF1ab/nsp769N69NaaCaaT11B.1.2600.003344
ORF1ab/nsp769N69NaaCaaT11B.1.2760.016949
ORF1ab/nsp769N69NaaCaaT11B.1.2790.000514
ORF1ab/nsp769N69NaaCaaT11B.1.3230.020833
ORF1ab/nsp769N69NaaCaaT11B.1.3240.001605
ORF1ab/nsp769N69NaaCaaT11B.1.3350.010309
ORF1ab/nsp769N69NaaCaaT11B.1.3360.002439
ORF1ab/nsp769N69SaAcaGc11B.1.3510.00003
ORF1ab/nsp769N69NaaCaaT11B.1.351.20.000303
ORF1ab/nsp769N69NaaCaaT11B.1.351.30.000876
ORF1ab/nsp769N69NaaCaaT11B.1.36.360.000602
ORF1ab/nsp769N69NaaCaaT11B.1.36.380.001642
ORF1ab/nsp769N69NaaCaaT11B.1.36.80.001
ORF1ab/nsp769N69SaAcaGc11B.1.3610.001289
ORF1ab/nsp769N69NaaCaaT11B.1.3670.000792
ORF1ab/nsp769N69NaaCaaT11B.1.3690.000285
ORF1ab/nsp769N69NaaCaaT11B.1.3770.004566
ORF1ab/nsp769N69NaaCaaT11B.1.3800.006623
ORF1ab/nsp769N69NaaCaaT11B.1.3850.010638
ORF1ab/nsp769N69NaaCaaT11B.1.3960.000706
ORF1ab/nsp769N69NaaCaaT11B.1.3980.002976
ORF1ab/nsp769N69NaaCaaT11B.1.4150.014286
ORF1ab/nsp769N69NaaCaaT11B.1.438.10.000107
ORF1ab/nsp769N69NaaCaaT11B.1.466.20.000391
ORF1ab/nsp769N69NaaCaaT11B.1.4670.04
ORF1ab/nsp769N69NaaCaaT11B.1.4680.005714
ORF1ab/nsp769N69NaaCaaT11B.1.4740.001901
ORF1ab/nsp769N69NaaCaaT11B.1.4990.00105
ORF1ab/nsp769N69NaaCaaT11B.1.5090.000866
ORF1ab/nsp769N69NaaCaaT11B.1.5170.000427
ORF1ab/nsp769N69NaaCaaT11B.1.5410.004425
ORF1ab/nsp769N69NaaCaaT11B.1.5500.013699
ORF1ab/nsp769N69NaaCaaT11B.1.5650.00081
ORF1ab/nsp769N69NaaCaaT11B.1.5770.000687
ORF1ab/nsp769N69NaaCaaT11B.1.5800.004065
ORF1ab/nsp769N69NaaCaaT11B.1.5870.001898
ORF1ab/nsp769N69NaaCaaT11B.1.5930.01087
ORF1ab/nsp769N69NaaCaaT11B.1.5950.000261
ORF1ab/nsp769N69NaaCaaT11B.1.595.10.005848
ORF1ab/nsp769N69NaaCaaT11B.1.6030.010638
ORF1ab/nsp769N69SaAcaGc11B.1.617.20.000004
ORF1ab/nsp769N69DAacGac11B.1.617.20.000004
ORF1ab/nsp769N69NaaCaaT11B.1.6200.000946
ORF1ab/nsp769N69NaaCaaT11B.1.6250.002353
ORF1ab/nsp769N69NaaCaaT11B.1.6310.003367
ORF1ab/nsp769N69NaaCaaT11B.40.002208
ORF1ab/nsp769N69NaaCaaT11B.400.000364
ORF1ab/nsp769N69FAAcTTc11C.170.055556
ORF1ab/nsp769N69NaaCaaT11C.360.000911
ORF1ab/nsp769N69SaAcaGc11C.36.30.000567
ORF1ab/nsp769N69delAAC---11N.40.004255
ORF1ab/nsp769N69YAacTac11P.10.000016
ORF1ab/nsp769N69IaAcaTc11P.1.120.000484
ORF1ab/nsp769N69HAacCac11P.1.140.000048
ORF1ab/nsp769N69NaaCaaT11P.20.000187
ORF1ab/nsp769N69SaAcaGc11Q.20.000613
ORF1ab/nsp769N69NaaCaaT11Q.30.000145
ORF1ab/nsp769N69KaaCaaA11Q.80.000165
ORF1ab/nsp769N69NaaCaaT11W.20.004831
ORF1ab/nsp769N69NaaCaaT11Z.10.00289

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.